RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 KIR2DL5AQ8N109 375 aa9.72□□□□□ -0.85
TPM1-220ENST00000559556 GDPD1Q8N9F7 314 aa9.72□□□□□ -0.85
TPM1-220ENST00000559556 KIR2DL5BQ8NHK3 375 aa9.72□□□□□ -0.85
TPM1-220ENST00000559556 VN1R17PQ8TDU5 208 aa9.72□□□□□ -0.85
TPM1-220ENST00000559556 QTRT1Q9BXR0 403 aaKnown RBP9.72□□□□□ -0.85
TPM1-220ENST00000559556 MRPS26Q9BYN8 205 aaKnown RBP9.72□□□□□ -0.85
TPM1-220ENST00000559556 COMMD5Q9GZQ3 224 aa9.72□□□□□ -0.85
TPM1-220ENST00000559556 DAZ1Q9NQZ3 744 aaKnown RBP9.72□□□□□ -0.85
TPM1-220ENST00000559556 SULT1C2O00338 296 aa9.71□□□□□ -0.86
TPM1-220ENST00000559556 UPK2O00526 184 aa9.71□□□□□ -0.86
TPM1-220ENST00000559556 CYB5BO43169 146 aa9.71□□□□□ -0.86
TPM1-220ENST00000559556 HPRT1P00492 218 aa9.71□□□□□ -0.86
TPM1-220ENST00000559556 PTHLHP12272 177 aa9.71□□□□□ -0.86
TPM1-220ENST00000559556 SCAND1P57086 179 aa9.71□□□□□ -0.86
TPM1-220ENST00000559556 CEMP1Q6PRD7 247 aaPredicted RBP9.71□□□□□ -0.86
TPM1-220ENST00000559556 GVQW1Q8N7I0 195 aa9.71□□□□□ -0.86
TPM1-220ENST00000559556 OR10W1Q8NGF6 305 aa9.71□□□□□ -0.86
TPM1-220ENST00000559556 FCGR1BQ92637 280 aa9.71□□□□□ -0.86
TPM1-220ENST00000559556 SLC25A38Q96DW6 304 aa9.71□□□□□ -0.86
TPM1-220ENST00000559556 BSCL2Q96G97 398 aaPredicted RBP9.71□□□□□ -0.86
TPM1-220ENST00000559556 SLC5A7Q9GZV3 580 aa9.71□□□□□ -0.86
TPM1-220ENST00000559556 PLEKHA2Q9HB19 425 aa9.71□□□□□ -0.86
TPM1-220ENST00000559556 TMEM140Q9NV12 185 aa9.71□□□□□ -0.86
TPM1-220ENST00000559556 COMMD9Q9P000 198 aa9.71□□□□□ -0.86
TPM1-220ENST00000559556 A0A0A6YYH2 397 aa9.7□□□□□ -0.86
TPM1-220ENST00000559556 A6NJ64 397 aa9.7□□□□□ -0.86
TPM1-220ENST00000559556 SERPINE2P07093 398 aa9.7□□□□□ -0.86
TPM1-220ENST00000559556 SPSB3Q6PJ21 355 aa9.7□□□□□ -0.86
TPM1-220ENST00000559556 ZNF818PQ6ZRF7 136 aa9.7□□□□□ -0.86
TPM1-220ENST00000559556 HOGA1Q86XE5 327 aa9.7□□□□□ -0.86
TPM1-220ENST00000559556 RNF183Q96D59 192 aa9.7□□□□□ -0.86
TPM1-220ENST00000559556 ATP6V0BQ99437 205 aa9.7□□□□□ -0.86
TPM1-220ENST00000559556 UBQLN2Q9UHD9 624 aa9.7□□□□□ -0.86
TPM1-220ENST00000559556 ETV7Q9Y603 341 aa9.7□□□□□ -0.86
TPM1-220ENST00000559556 HERC2O95714 4834 aa9.7□□□□□ -0.86
TPM1-220ENST00000559556 OR2T8A6NH00 312 aa9.69□□□□□ -0.86
TPM1-220ENST00000559556 NDUFA4O00483 81 aa9.69□□□□□ -0.86
TPM1-220ENST00000559556 S1PR2O95136 353 aa9.69□□□□□ -0.86
TPM1-220ENST00000559556 PSMB9P28065 219 aa9.69□□□□□ -0.86
TPM1-220ENST00000559556 WT1-ASQ06250 92 aa9.69□□□□□ -0.86
TPM1-220ENST00000559556 HSD17B13Q7Z5P4 300 aaPredicted RBP9.69□□□□□ -0.86
TPM1-220ENST00000559556 SPARTQ8N0X7 666 aa9.69□□□□□ -0.86
TPM1-220ENST00000559556 STPG3Q8N7X2 389 aa9.69□□□□□ -0.86
TPM1-220ENST00000559556 DMBX1Q8NFW5 382 aa9.69□□□□□ -0.86
TPM1-220ENST00000559556 OR5H6Q8NGV6 325 aa9.69□□□□□ -0.86
TPM1-220ENST00000559556 OR51H1Q8NH63 302 aa9.69□□□□□ -0.86
TPM1-220ENST00000559556 CD300LFQ8TDQ1 290 aa9.69□□□□□ -0.86
TPM1-220ENST00000559556 TRAV18A0A075B6X5 111 aa9.68□□□□□ -0.86
TPM1-220ENST00000559556 OR4C46A6NHA9 309 aa9.68□□□□□ -0.86
TPM1-220ENST00000559556 MARCH11A6NNE9 402 aa9.68□□□□□ -0.86
TPM1-220ENST00000559556 F8W735 103 aaPredicted RBP9.68□□□□□ -0.86
TPM1-220ENST00000559556 TRAPPC2P0DI81 140 aa9.68□□□□□ -0.86
TPM1-220ENST00000559556 TRAPPC2BP0DI82 140 aa9.68□□□□□ -0.86
TPM1-220ENST00000559556 OR13C7P0DN81 318 aa9.68□□□□□ -0.86
TPM1-220ENST00000559556 SDC2P34741 201 aa9.68□□□□□ -0.86
TPM1-220ENST00000559556 MFAP2P55001 183 aa9.68□□□□□ -0.86
TPM1-220ENST00000559556 FXYD4P59646 89 aa9.68□□□□□ -0.86
TPM1-220ENST00000559556 LAMTOR1Q6IAA8 161 aa9.68□□□□□ -0.86
TPM1-220ENST00000559556 OR5AP2Q8NGF4 316 aa9.68□□□□□ -0.86
TPM1-220ENST00000559556 OR1L8Q8NGR8 309 aa9.68□□□□□ -0.86
TPM1-220ENST00000559556 GIMAP1Q8WWP7 306 aa9.68□□□□□ -0.86
TPM1-220ENST00000559556 BORCS5Q969J3 196 aa9.68□□□□□ -0.86
TPM1-220ENST00000559556 GALNT14Q96FL9 552 aa9.68□□□□□ -0.86
TPM1-220ENST00000559556 CHRDL1Q9BU40 450 aa9.68□□□□□ -0.86
TPM1-220ENST00000559556 SSR3Q9UNL2 185 aa9.68□□□□□ -0.86
TPM1-220ENST00000559556 KLK5Q9Y337 293 aaPredicted RBP9.68□□□□□ -0.86
TPM1-220ENST00000559556 F11RQ9Y624 299 aaKnown RBP9.68□□□□□ -0.86
TPM1-220ENST00000559556 FAT2Q9NYQ8 4349 aa9.67□□□□□ -0.86
TPM1-220ENST00000559556 TEX50A0A1B0GTY4 177 aa9.67□□□□□ -0.86
TPM1-220ENST00000559556 K7EMT4 169 aa9.67□□□□□ -0.86
TPM1-220ENST00000559556 ADMP35318 185 aa9.67□□□□□ -0.86
TPM1-220ENST00000559556 RPL5P46777 297 aaKnown RBP9.67□□□□□ -0.86
TPM1-220ENST00000559556 AADACL3Q5VUY0 350 aa9.67□□□□□ -0.86
TPM1-220ENST00000559556 SLC25A24Q6NUK1 477 aa9.67□□□□□ -0.86
TPM1-220ENST00000559556 TMEM17Q86X19 198 aa9.67□□□□□ -0.86
TPM1-220ENST00000559556 CADM3Q8N126 398 aa9.67□□□□□ -0.86
TPM1-220ENST00000559556 TMEM217Q8N7C4 229 aa9.67□□□□□ -0.86
TPM1-220ENST00000559556 AUNIPQ9H7T9 357 aa9.67□□□□□ -0.86
TPM1-220ENST00000559556 NDUFA4L2Q9NRX3 87 aa9.67□□□□□ -0.86
TPM1-220ENST00000559556 DNAH17Q9UFH2 4485 aa9.67□□□□□ -0.86
TPM1-220ENST00000559556 C15orf62A8K5M9 175 aa9.66□□□□□ -0.86
TPM1-220ENST00000559556 K7EIM0 57 aa9.66□□□□□ -0.86
TPM1-220ENST00000559556 SMIM18P0DKX4 95 aa9.66□□□□□ -0.86
TPM1-220ENST00000559556 RPA2P15927 270 aa9.66□□□□□ -0.86
TPM1-220ENST00000559556 F2RP25116 425 aa9.66□□□□□ -0.86
TPM1-220ENST00000559556 GNRHRP30968 328 aa9.66□□□□□ -0.86
TPM1-220ENST00000559556 CBX5P45973 191 aa9.66□□□□□ -0.86
TPM1-220ENST00000559556 HERV-K104P61576 105 aa9.66□□□□□ -0.86
TPM1-220ENST00000559556 ERVK-16P61578 105 aa9.66□□□□□ -0.86
TPM1-220ENST00000559556 MXD1Q05195 221 aa9.66□□□□□ -0.86
TPM1-220ENST00000559556 SCARB1Q8WTV0 552 aa9.66□□□□□ -0.86
TPM1-220ENST00000559556 LSM10Q969L4 123 aaKnown RBP9.66□□□□□ -0.86
TPM1-220ENST00000559556 ZNF414Q96IQ9 312 aa9.66□□□□□ -0.86
TPM1-220ENST00000559556 MAP6D1Q9H9H5 199 aa9.66□□□□□ -0.86
TPM1-220ENST00000559556 C21orf62Q9NYP8 219 aa9.66□□□□□ -0.86
TPM1-220ENST00000559556 IGHV3OR16-8A0A075B7F1 116 aa9.65□□□□□ -0.86
TPM1-220ENST00000559556 RLN1P04808 185 aa9.65□□□□□ -0.86
TPM1-220ENST00000559556 CTSDP07339 412 aaPredicted RBP9.65□□□□□ -0.86
TPM1-220ENST00000559556 CLEC2LP0C7M8 214 aa9.65□□□□□ -0.86
TPM1-220ENST00000559556 RPL35AP18077 110 aaKnown RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms