RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 GNRHRP30968 328 aa11.19□□□□□ -0.62
LRRC28-213ENST00000559399 UBE2NLQ5JXB2 153 aa11.19□□□□□ -0.62
LRRC28-213ENST00000559399 TMEM69Q5SWH9 247 aa11.19□□□□□ -0.62
LRRC28-213ENST00000559399 GDPD1Q8N9F7 314 aa11.19□□□□□ -0.62
LRRC28-213ENST00000559399 MOB3AQ96BX8 217 aa11.19□□□□□ -0.62
LRRC28-213ENST00000559399 MRPL27Q9P0M9 148 aaKnown RBP11.19□□□□□ -0.62
LRRC28-213ENST00000559399 IGHV3-35A0A0C4DH35 117 aa11.18□□□□□ -0.62
LRRC28-213ENST00000559399 TGOLN2O43493 480 aa11.18□□□□□ -0.62
LRRC28-213ENST00000559399 TRAPPC2P0DI81 140 aa11.18□□□□□ -0.62
LRRC28-213ENST00000559399 TRAPPC2BP0DI82 140 aa11.18□□□□□ -0.62
LRRC28-213ENST00000559399 C8orf88P0DMB2 117 aa11.18□□□□□ -0.62
LRRC28-213ENST00000559399 ELLP55199 621 aaPredicted RBP11.18□□□□□ -0.62
LRRC28-213ENST00000559399 TAS2R46P59540 309 aa11.18□□□□□ -0.62
LRRC28-213ENST00000559399 ZNF585BQ52M93 769 aa11.18□□□□□ -0.62
LRRC28-213ENST00000559399 RBPMS2Q6ZRY4 209 aaKnown RBP11.18□□□□□ -0.62
LRRC28-213ENST00000559399 OR10W1Q8NGF6 305 aa11.18□□□□□ -0.62
LRRC28-213ENST00000559399 OR1L6Q8NGR2 347 aa11.18□□□□□ -0.62
LRRC28-213ENST00000559399 VN1R17PQ8TDU5 208 aa11.18□□□□□ -0.62
LRRC28-213ENST00000559399 ZNF2Q9BSG1 426 aaPredicted RBP11.18□□□□□ -0.62
LRRC28-213ENST00000559399 ANAPC10Q9UM13 185 aa11.18□□□□□ -0.62
LRRC28-213ENST00000559399 LOC102724200A0A096LPH7 203 aaPredicted RBP11.17□□□□□ -0.62
LRRC28-213ENST00000559399 PGLYRP1O75594 196 aaPredicted RBP11.17□□□□□ -0.62
LRRC28-213ENST00000559399 OR13C7P0DN81 318 aa11.17□□□□□ -0.62
LRRC28-213ENST00000559399 F2RP25116 425 aa11.17□□□□□ -0.62
LRRC28-213ENST00000559399 RFX2P48378 723 aa11.17□□□□□ -0.62
LRRC28-213ENST00000559399 TAS2R20P59543 309 aa11.17□□□□□ -0.62
LRRC28-213ENST00000559399 WT1-ASQ06250 92 aa11.17□□□□□ -0.62
LRRC28-213ENST00000559399 DHRS11Q6UWP2 260 aa11.17□□□□□ -0.62
LRRC28-213ENST00000559399 CMTM1Q8IZ96 169 aa11.17□□□□□ -0.62
LRRC28-213ENST00000559399 SAMD12Q8N8I0 201 aa11.17□□□□□ -0.62
LRRC28-213ENST00000559399 OR1L8Q8NGR8 309 aa11.17□□□□□ -0.62
LRRC28-213ENST00000559399 OR5H2Q8NGV7 314 aa11.17□□□□□ -0.62
LRRC28-213ENST00000559399 TMEM190Q8WZ59 177 aa11.17□□□□□ -0.62
LRRC28-213ENST00000559399 LSM10Q969L4 123 aaKnown RBP11.17□□□□□ -0.62
LRRC28-213ENST00000559399 ZNF436Q9C0F3 470 aaPredicted RBP11.17□□□□□ -0.62
LRRC28-213ENST00000559399 TNCP24821 2201 aa11.17□□□□□ -0.62
LRRC28-213ENST00000559399 TEX50A0A1B0GTY4 177 aa11.16□□□□□ -0.62
LRRC28-213ENST00000559399 PMP2P02689 132 aa11.16□□□□□ -0.62
LRRC28-213ENST00000559399 SERPINE2P07093 398 aa11.16□□□□□ -0.62
LRRC28-213ENST00000559399 TGFBR1P36897 503 aa11.16□□□□□ -0.62
LRRC28-213ENST00000559399 TSPAN14Q8NG11 270 aa11.16□□□□□ -0.62
LRRC28-213ENST00000559399 FCAMRQ8WWV6 532 aa11.16□□□□□ -0.62
LRRC28-213ENST00000559399 DGCR14Q96DF8 476 aaKnown RBP11.16□□□□□ -0.62
LRRC28-213ENST00000559399 BSCL2Q96G97 398 aaPredicted RBP11.16□□□□□ -0.62
LRRC28-213ENST00000559399 SPAG8Q99932 426 aaPredicted RBP11.16□□□□□ -0.62
LRRC28-213ENST00000559399 HINT2Q9BX68 163 aa11.16□□□□□ -0.62
LRRC28-213ENST00000559399 C5orf66Q9H5L9 145 aa11.16□□□□□ -0.62
LRRC28-213ENST00000559399 NDUFA4L2Q9NRX3 87 aa11.16□□□□□ -0.62
LRRC28-213ENST00000559399 CSMD3Q7Z407 3707 aa11.16□□□□□ -0.62
LRRC28-213ENST00000559399 OR2T8A6NH00 312 aa11.15□□□□□ -0.62
LRRC28-213ENST00000559399 SNAPC5O75971 98 aa11.15□□□□□ -0.62
LRRC28-213ENST00000559399 KRASP01116 189 aa11.15□□□□□ -0.62
LRRC28-213ENST00000559399 LPAR6P43657 344 aa11.15□□□□□ -0.62
LRRC28-213ENST00000559399 SLC25A24Q6NUK1 477 aa11.15□□□□□ -0.62
LRRC28-213ENST00000559399 SLC38A6Q8IZM9 456 aa11.15□□□□□ -0.62
LRRC28-213ENST00000559399 CADM3Q8N126 398 aa11.15□□□□□ -0.62
LRRC28-213ENST00000559399 OR2C3Q8N628 320 aa11.15□□□□□ -0.62
LRRC28-213ENST00000559399 OR6F1Q8NGZ6 308 aa11.15□□□□□ -0.62
LRRC28-213ENST00000559399 ATP6V0BQ99437 205 aa11.15□□□□□ -0.62
LRRC28-213ENST00000559399 FXYD6Q9H0Q3 95 aa11.15□□□□□ -0.62
LRRC28-213ENST00000559399 DAZ1Q9NQZ3 744 aaKnown RBP11.15□□□□□ -0.62
LRRC28-213ENST00000559399 C21orf62Q9NYP8 219 aa11.15□□□□□ -0.62
LRRC28-213ENST00000559399 OR51B2Q9Y5P1 312 aa11.15□□□□□ -0.62
LRRC28-213ENST00000559399 F11RQ9Y624 299 aaKnown RBP11.15□□□□□ -0.62
LRRC28-213ENST00000559399 DNAH1Q9P2D7 4330 aa11.15□□□□□ -0.63
LRRC28-213ENST00000559399 EPPK1P58107 5090 aaKnown RBP11.14□□□□□ -0.63
LRRC28-213ENST00000559399 GPR31O00270 319 aa11.14□□□□□ -0.63
LRRC28-213ENST00000559399 NAT1P18440 290 aa11.14□□□□□ -0.63
LRRC28-213ENST00000559399 PRSS3P35030 304 aa11.14□□□□□ -0.63
LRRC28-213ENST00000559399 G6PCP35575 357 aa11.14□□□□□ -0.63
LRRC28-213ENST00000559399 RPS19P39019 145 aaKnown RBP11.14□□□□□ -0.63
LRRC28-213ENST00000559399 SPSB3Q6PJ21 355 aa11.14□□□□□ -0.63
LRRC28-213ENST00000559399 OR5B3Q8NH48 314 aa11.14□□□□□ -0.63
LRRC28-213ENST00000559399 OVOL2Q9BRP0 275 aa11.14□□□□□ -0.63
LRRC28-213ENST00000559399 VCX3AQ9NNX9 186 aa11.14□□□□□ -0.63
LRRC28-213ENST00000559399 PRNDQ9UKY0 176 aa11.14□□□□□ -0.63
LRRC28-213ENST00000559399 NSG2Q9Y328 171 aa11.14□□□□□ -0.63
LRRC28-213ENST00000559399 NDUFA4O00483 81 aa11.13□□□□□ -0.63
LRRC28-213ENST00000559399 TSPAN4O14817 238 aa11.13□□□□□ -0.63
LRRC28-213ENST00000559399 S100GP29377 79 aa11.13□□□□□ -0.63
LRRC28-213ENST00000559399 HRH1P35367 487 aa11.13□□□□□ -0.63
LRRC28-213ENST00000559399 MFAP2P55001 183 aa11.13□□□□□ -0.63
LRRC28-213ENST00000559399 APOC4P55056 127 aa11.13□□□□□ -0.63
LRRC28-213ENST00000559399 LSM3P62310 102 aaKnown RBP11.13□□□□□ -0.63
LRRC28-213ENST00000559399 LAMTOR1Q6IAA8 161 aa11.13□□□□□ -0.63
LRRC28-213ENST00000559399 UBAC2Q8NBM4 344 aa11.13□□□□□ -0.63
LRRC28-213ENST00000559399 SCARB1Q8WTV0 552 aa11.13□□□□□ -0.63
LRRC28-213ENST00000559399 YIPF6Q96EC8 236 aa11.13□□□□□ -0.63
LRRC28-213ENST00000559399 TMEM56Q96MV1 263 aa11.13□□□□□ -0.63
LRRC28-213ENST00000559399 TSC22D3Q99576 134 aa11.13□□□□□ -0.63
LRRC28-213ENST00000559399 C20orf24Q9BUV8 137 aa11.13□□□□□ -0.63
LRRC28-213ENST00000559399 FKBP11Q9NYL4 201 aa11.13□□□□□ -0.63
LRRC28-213ENST00000559399 LYSTQ99698 3801 aa11.12□□□□□ -0.63
LRRC28-213ENST00000559399 BIRC6Q9NR09 4857 aa11.12□□□□□ -0.63
LRRC28-213ENST00000559399 IGHV3-21A0A0B4J1V1 117 aa11.12□□□□□ -0.63
LRRC28-213ENST00000559399 K7EIM0 57 aa11.12□□□□□ -0.63
LRRC28-213ENST00000559399 HLA-DMAP28067 261 aa11.12□□□□□ -0.63
LRRC28-213ENST00000559399 PHLDA2Q53GA4 152 aa11.12□□□□□ -0.63
LRRC28-213ENST00000559399 Q56UQ5 140 aa11.12□□□□□ -0.63
LRRC28-213ENST00000559399 SLC25A46Q96AG3 418 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms