RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 GPR146Q96CH1 333 aa16.93■□□□□ 0.3
SNX1-206ENST00000559389 NDUFA4L2Q9NRX3 87 aa16.93■□□□□ 0.3
SNX1-206ENST00000559389 TCRBV4S1A1TA0A5B7 111 aa16.92■□□□□ 0.3
SNX1-206ENST00000559389 ADARB2-AS1A8MUL3 147 aa16.92■□□□□ 0.3
SNX1-206ENST00000559389 H3BUA1 57 aa16.92■□□□□ 0.3
SNX1-206ENST00000559389 RPLP1P05386 114 aaKnown RBP16.92■□□□□ 0.3
SNX1-206ENST00000559389 TRAPPC2P0DI81 140 aa16.92■□□□□ 0.3
SNX1-206ENST00000559389 TRAPPC2BP0DI82 140 aa16.92■□□□□ 0.3
SNX1-206ENST00000559389 PF4V1P10720 104 aa16.92■□□□□ 0.3
SNX1-206ENST00000559389 AREGP15514 252 aa16.92■□□□□ 0.3
SNX1-206ENST00000559389 RAB25P57735 213 aa16.92■□□□□ 0.3
SNX1-206ENST00000559389 AARDQ4LEZ3 155 aa16.92■□□□□ 0.3
SNX1-206ENST00000559389 LCNL1Q6ZST4 164 aa16.92■□□□□ 0.3
SNX1-206ENST00000559389 NDUFA11Q86Y39 141 aa16.92■□□□□ 0.3
SNX1-206ENST00000559389 OR52B4Q8NGK2 314 aa16.92■□□□□ 0.3
SNX1-206ENST00000559389 COQ8AQ8NI60 647 aa16.92■□□□□ 0.3
SNX1-206ENST00000559389 CACNG5Q9UF02 275 aa16.92■□□□□ 0.3
SNX1-206ENST00000559389 TSSC4Q9Y5U2 329 aaPredicted RBP16.92■□□□□ 0.3
SNX1-206ENST00000559389 TET2Q6N021 2002 aaPredicted RBP16.91■□□□□ 0.3
SNX1-206ENST00000559389 NPIPB5A8MRT5 1133 aa16.91■□□□□ 0.3
SNX1-206ENST00000559389 RBMXL2O75526 392 aaKnown RBP16.91■□□□□ 0.3
SNX1-206ENST00000559389 KHDC1LQ5JSQ8 128 aa16.91■□□□□ 0.3
SNX1-206ENST00000559389 PLET1Q6UQ28 207 aa16.91■□□□□ 0.3
SNX1-206ENST00000559389 TTC9CQ8N5M4 171 aa16.91■□□□□ 0.3
SNX1-206ENST00000559389 OR5T1Q8NG75 326 aa16.91■□□□□ 0.3
SNX1-206ENST00000559389 KLK15Q9H2R5 256 aa16.91■□□□□ 0.3
SNX1-206ENST00000559389 TENM1Q9UKZ4 2725 aa16.9■□□□□ 0.3
SNX1-206ENST00000559389 ST8SIA3O43173 380 aa16.9■□□□□ 0.3
SNX1-206ENST00000559389 BRI3O95415 125 aa16.9■□□□□ 0.3
SNX1-206ENST00000559389 PTTG1O95997 202 aa16.9■□□□□ 0.3
SNX1-206ENST00000559389 RPL23AP62750 156 aaKnown RBP16.9■□□□□ 0.3
SNX1-206ENST00000559389 PRCDQ00LT1 54 aa16.9■□□□□ 0.3
SNX1-206ENST00000559389 DCTN2Q13561 401 aaKnown RBP16.9■□□□□ 0.3
SNX1-206ENST00000559389 HSD17B13Q7Z5P4 300 aaPredicted RBP16.9■□□□□ 0.3
SNX1-206ENST00000559389 OR10W1Q8NGF6 305 aa16.9■□□□□ 0.3
SNX1-206ENST00000559389 MITD1Q8WV92 249 aa16.9■□□□□ 0.3
SNX1-206ENST00000559389 SEC22CQ9BRL7 303 aa16.9■□□□□ 0.3
SNX1-206ENST00000559389 HINT2Q9BX68 163 aa16.9■□□□□ 0.3
SNX1-206ENST00000559389 COA4Q9NYJ1 87 aa16.9■□□□□ 0.3
SNX1-206ENST00000559389 CRYGCP07315 174 aa16.89■□□□□ 0.29
SNX1-206ENST00000559389 SULT1A3P0DMM9 295 aa16.89■□□□□ 0.29
SNX1-206ENST00000559389 SULT1A4P0DMN0 295 aa16.89■□□□□ 0.29
SNX1-206ENST00000559389 PSMB6P28072 239 aa16.89■□□□□ 0.29
SNX1-206ENST00000559389 RAB9AP51151 201 aa16.89■□□□□ 0.29
SNX1-206ENST00000559389 HSPE1P61604 102 aaKnown RBP16.89■□□□□ 0.29
SNX1-206ENST00000559389 WT1-ASQ06250 92 aa16.89■□□□□ 0.29
SNX1-206ENST00000559389 TMEM65Q6PI78 240 aa16.89■□□□□ 0.29
SNX1-206ENST00000559389 ZNF431Q8TF32 576 aaPredicted RBP16.89■□□□□ 0.29
SNX1-206ENST00000559389 MARVELD1Q9BSK0 173 aa16.89■□□□□ 0.29
SNX1-206ENST00000559389 SLA2Q9H6Q3 261 aa16.89■□□□□ 0.29
SNX1-206ENST00000559389 ZFP57Q9NU63 452 aa16.89■□□□□ 0.29
SNX1-206ENST00000559389 TMED3Q9Y3Q3 217 aa16.89■□□□□ 0.29
SNX1-206ENST00000559389 STAB1Q9NY15 2570 aa16.89■□□□□ 0.29
SNX1-206ENST00000559389 IL5P05113 134 aa16.88■□□□□ 0.29
SNX1-206ENST00000559389 REG1AP05451 166 aa16.88■□□□□ 0.29
SNX1-206ENST00000559389 SPNP16150 400 aa16.88■□□□□ 0.29
SNX1-206ENST00000559389 CTRB1P17538 263 aa16.88■□□□□ 0.29
SNX1-206ENST00000559389 TPPP2P59282 170 aa16.88■□□□□ 0.29
SNX1-206ENST00000559389 SMCO1Q147U7 214 aa16.88■□□□□ 0.29
SNX1-206ENST00000559389 CTRB2Q6GPI1 263 aa16.88■□□□□ 0.29
SNX1-206ENST00000559389 C19orf35Q6ZS72 473 aa16.88■□□□□ 0.29
SNX1-206ENST00000559389 PDCD10Q9BUL8 212 aa16.88■□□□□ 0.29
SNX1-206ENST00000559389 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.88■□□□□ 0.29
SNX1-206ENST00000559389 A0A1W2PRX2 142 aa16.87■□□□□ 0.29
SNX1-206ENST00000559389 TRGV3P03979 118 aa16.87■□□□□ 0.29
SNX1-206ENST00000559389 KIAA0141Q14154 515 aaPredicted RBP16.87■□□□□ 0.29
SNX1-206ENST00000559389 C2orf68Q2NKX9 166 aa16.87■□□□□ 0.29
SNX1-206ENST00000559389 PDLIM3Q53GG5 364 aaPredicted RBP16.87■□□□□ 0.29
SNX1-206ENST00000559389 OR52E5Q8NH55 327 aa16.87■□□□□ 0.29
SNX1-206ENST00000559389 MS4A10Q96PG2 267 aa16.87■□□□□ 0.29
SNX1-206ENST00000559389 PLEKHA3Q9HB20 300 aa16.87■□□□□ 0.29
SNX1-206ENST00000559389 ZNF355PQ9NSJ1 428 aa16.87■□□□□ 0.29
SNX1-206ENST00000559389 A0A1B0GU03 582 aa16.86■□□□□ 0.29
SNX1-206ENST00000559389 INMT-MINDY4F8WBC2 141 aa16.86■□□□□ 0.29
SNX1-206ENST00000559389 ADAP1O75689 374 aa16.86■□□□□ 0.29
SNX1-206ENST00000559389 HOXB5P09067 269 aa16.86■□□□□ 0.29
SNX1-206ENST00000559389 OR13C7P0DN81 318 aa16.86■□□□□ 0.29
SNX1-206ENST00000559389 SLC25A6P12236 298 aa16.86■□□□□ 0.29
SNX1-206ENST00000559389 CDX1P47902 265 aaPredicted RBP16.86■□□□□ 0.29
SNX1-206ENST00000559389 NSUN5P1Q3KNT7 163 aa16.86■□□□□ 0.29
SNX1-206ENST00000559389 SPINK9Q5DT21 86 aa16.86■□□□□ 0.29
SNX1-206ENST00000559389 GGNBP1Q5YKI7 109 aa16.86■□□□□ 0.29
SNX1-206ENST00000559389 C18orf65Q6ZTR6 163 aa16.86■□□□□ 0.29
SNX1-206ENST00000559389 MRPL41Q8IXM3 137 aaKnown RBP16.86■□□□□ 0.29
SNX1-206ENST00000559389 ZNF491Q8N8L2 437 aa16.86■□□□□ 0.29
SNX1-206ENST00000559389 UBE2E2Q96LR5 201 aa16.86■□□□□ 0.29
SNX1-206ENST00000559389 TRBV9A0A0B4J1U6 114 aa16.85■□□□□ 0.29
SNX1-206ENST00000559389 INS-IGF2F8WCM5 200 aa16.85■□□□□ 0.29
SNX1-206ENST00000559389 M0QZ24 198 aa16.85■□□□□ 0.29
SNX1-206ENST00000559389 PRAF2O60831 178 aa16.85■□□□□ 0.29
SNX1-206ENST00000559389 IFNA17P01571 189 aa16.85■□□□□ 0.29
SNX1-206ENST00000559389 PRH1P02810 166 aa16.85■□□□□ 0.29
SNX1-206ENST00000559389 SPCS3P61009 180 aa16.85■□□□□ 0.29
SNX1-206ENST00000559389 KLK9Q2XQG4 91 aa16.85■□□□□ 0.29
SNX1-206ENST00000559389 KLHL30-AS1Q8NEE0 82 aa16.85■□□□□ 0.29
SNX1-206ENST00000559389 KLK9Q9UKQ9 250 aa16.85■□□□□ 0.29
SNX1-206ENST00000559389 PITX3O75364 302 aa16.84■□□□□ 0.29
SNX1-206ENST00000559389 DHFRP00374 187 aa16.84■□□□□ 0.29
SNX1-206ENST00000559389 DEFA5Q01523 94 aa16.84■□□□□ 0.29
SNX1-206ENST00000559389 OR2C3Q8N628 320 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms