RNA–Protein interactions for RNA: ENST00000559245.1

CDC42BPB-205, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-205ENST00000559245 SRSF8Q9BRL6 282 aaKnown RBP11.96□□□□□ -0.49
CDC42BPB-205ENST00000559245 C20orf24Q9BUV8 137 aa11.96□□□□□ -0.49
CDC42BPB-205ENST00000559245 C6orf62Q9GZU0 229 aaPredicted RBP11.96□□□□□ -0.49
CDC42BPB-205ENST00000559245 CCL28Q9NRJ3 127 aa11.96□□□□□ -0.49
CDC42BPB-205ENST00000559245 FBXL17Q9UF56 701 aa11.96□□□□□ -0.49
CDC42BPB-205ENST00000559245 PCLOQ9Y6V0 5065 aa11.95□□□□□ -0.5
CDC42BPB-205ENST00000559245 NDUFA4O00483 81 aa11.95□□□□□ -0.5
CDC42BPB-205ENST00000559245 CYB5BO43169 146 aa11.95□□□□□ -0.5
CDC42BPB-205ENST00000559245 RBFOX2O43251 390 aaKnown RBP eCLIP11.95□□□□□ -0.58e-8■□□□□ 8.6
CDC42BPB-205ENST00000559245 SSX5O60225 188 aa11.95□□□□□ -0.5
CDC42BPB-205ENST00000559245 IFNA4P05014 189 aa11.95□□□□□ -0.5
CDC42BPB-205ENST00000559245 TAS2R31P59538 309 aa11.95□□□□□ -0.5
CDC42BPB-205ENST00000559245 GNG2P59768 71 aa11.95□□□□□ -0.5
CDC42BPB-205ENST00000559245 RBMS2Q15434 407 aaKnown RBP11.95□□□□□ -0.5
CDC42BPB-205ENST00000559245 NR2C2APQ86WQ0 139 aa11.95□□□□□ -0.5
CDC42BPB-205ENST00000559245 GDPD1Q8N9F7 314 aa11.95□□□□□ -0.5
CDC42BPB-205ENST00000559245 C11orf45Q8TAV5 145 aa11.95□□□□□ -0.5
CDC42BPB-205ENST00000559245 GATAD1Q8WUU5 269 aa11.95□□□□□ -0.5
CDC42BPB-205ENST00000559245 BSCL2Q96G97 398 aaPredicted RBP11.95□□□□□ -0.5
CDC42BPB-205ENST00000559245 RARRES2Q99969 163 aa11.95□□□□□ -0.5
CDC42BPB-205ENST00000559245 CHRDL1Q9BU40 450 aa11.95□□□□□ -0.5
CDC42BPB-205ENST00000559245 MFFQ9GZY8 342 aa11.95□□□□□ -0.5
CDC42BPB-205ENST00000559245 CSTL1Q9H114 145 aa11.95□□□□□ -0.5
CDC42BPB-205ENST00000559245 IGHV3OR16-8A0A075B7F1 116 aa11.94□□□□□ -0.5
CDC42BPB-205ENST00000559245 SMIM30A4D0T7 59 aa11.94□□□□□ -0.5
CDC42BPB-205ENST00000559245 SULT1C2O00338 296 aa11.94□□□□□ -0.5
CDC42BPB-205ENST00000559245 ZNF207O43670 478 aaKnown RBP11.94□□□□□ -0.5
CDC42BPB-205ENST00000559245 HPRT1P00492 218 aa11.94□□□□□ -0.5
CDC42BPB-205ENST00000559245 NQO2P16083 231 aa11.94□□□□□ -0.5
CDC42BPB-205ENST00000559245 MSMO1Q15800 293 aa11.94□□□□□ -0.5
CDC42BPB-205ENST00000559245 ZNF124Q15973 351 aa11.94□□□□□ -0.5
CDC42BPB-205ENST00000559245 POU2AF1Q16633 256 aa11.94□□□□□ -0.5
CDC42BPB-205ENST00000559245 SLC25A24Q6NUK1 477 aa11.94□□□□□ -0.5
CDC42BPB-205ENST00000559245 SPSB3Q6PJ21 355 aa11.94□□□□□ -0.5
CDC42BPB-205ENST00000559245 QTRT1Q9BXR0 403 aaKnown RBP11.94□□□□□ -0.5
CDC42BPB-205ENST00000559245 C11orf68Q9H3H3 251 aaKnown RBP11.94□□□□□ -0.5
CDC42BPB-205ENST00000559245 KIAA1109Q2LD37 5005 aa11.94□□□□□ -0.5
CDC42BPB-205ENST00000559245 A0A087WXM4 84 aa11.93□□□□□ -0.5
CDC42BPB-205ENST00000559245 IGHV3-21A0A0B4J1V1 117 aa11.93□□□□□ -0.5
CDC42BPB-205ENST00000559245 TRDV1A0A1B0GX56 115 aa11.93□□□□□ -0.5
CDC42BPB-205ENST00000559245 MPTX1A8MV57 137 aa11.93□□□□□ -0.5
CDC42BPB-205ENST00000559245 K7EMT4 169 aa11.93□□□□□ -0.5
CDC42BPB-205ENST00000559245 SERPINE2P07093 398 aa11.93□□□□□ -0.5
CDC42BPB-205ENST00000559245 OR13C7P0DN81 318 aa11.93□□□□□ -0.5
CDC42BPB-205ENST00000559245 FCGR2CP31995 323 aa11.93□□□□□ -0.5
CDC42BPB-205ENST00000559245 SPARTQ8N0X7 666 aa11.93□□□□□ -0.5
CDC42BPB-205ENST00000559245 ZBTB34Q8NCN2 500 aa11.93□□□□□ -0.5
CDC42BPB-205ENST00000559245 TSPAN14Q8NG11 270 aa11.93□□□□□ -0.5
CDC42BPB-205ENST00000559245 OR13F1Q8NGS4 319 aa11.93□□□□□ -0.5
CDC42BPB-205ENST00000559245 C2CD4CQ8TF44 421 aa11.93□□□□□ -0.5
CDC42BPB-205ENST00000559245 TMEM140Q9NV12 185 aa11.93□□□□□ -0.5
CDC42BPB-205ENST00000559245 NDUFB11Q9NX14 153 aa11.93□□□□□ -0.5
CDC42BPB-205ENST00000559245 FGF2P09038 288 aa11.92□□□□□ -0.5
CDC42BPB-205ENST00000559245 TRAPPC2P0DI81 140 aa11.92□□□□□ -0.5
CDC42BPB-205ENST00000559245 TRAPPC2BP0DI82 140 aa11.92□□□□□ -0.5
CDC42BPB-205ENST00000559245 PTHLHP12272 177 aa11.92□□□□□ -0.5
CDC42BPB-205ENST00000559245 ADMP35318 185 aa11.92□□□□□ -0.5
CDC42BPB-205ENST00000559245 ARPC4P59998 168 aa11.92□□□□□ -0.5
CDC42BPB-205ENST00000559245 WT1-ASQ06250 92 aa11.92□□□□□ -0.5
CDC42BPB-205ENST00000559245 CATR1Q13166 79 aa11.92□□□□□ -0.5
CDC42BPB-205ENST00000559245 THOC7Q6I9Y2 204 aaKnown RBP11.92□□□□□ -0.5
CDC42BPB-205ENST00000559245 C22orf42Q6IC83 251 aa11.92□□□□□ -0.5
CDC42BPB-205ENST00000559245 ZNF367Q7RTV3 350 aa11.92□□□□□ -0.5
CDC42BPB-205ENST00000559245 DMBX1Q8NFW5 382 aa11.92□□□□□ -0.5
CDC42BPB-205ENST00000559245 OR11H2Q8NH07 326 aa11.92□□□□□ -0.5
CDC42BPB-205ENST00000559245 ATP6V0BQ99437 205 aa11.92□□□□□ -0.5
CDC42BPB-205ENST00000559245 MRPS26Q9BYN8 205 aaKnown RBP11.92□□□□□ -0.5
CDC42BPB-205ENST00000559245 C21orf62Q9NYP8 219 aa11.92□□□□□ -0.5
CDC42BPB-205ENST00000559245 TEX50A0A1B0GTY4 177 aa11.91□□□□□ -0.5
CDC42BPB-205ENST00000559245 C15orf62A8K5M9 175 aa11.91□□□□□ -0.5
CDC42BPB-205ENST00000559245 F8W735 103 aaPredicted RBP11.91□□□□□ -0.5
CDC42BPB-205ENST00000559245 SCGNO76038 276 aa11.91□□□□□ -0.5
CDC42BPB-205ENST00000559245 PPYP01298 95 aa11.91□□□□□ -0.5
CDC42BPB-205ENST00000559245 MFAP2P55001 183 aa11.91□□□□□ -0.5
CDC42BPB-205ENST00000559245 CMC4P56277 68 aaPredicted RBP11.91□□□□□ -0.5
CDC42BPB-205ENST00000559245 TCTAP57738 103 aa11.91□□□□□ -0.5
CDC42BPB-205ENST00000559245 UBE2UQ5VVX9 321 aa11.91□□□□□ -0.5
CDC42BPB-205ENST00000559245 HSD17B13Q7Z5P4 300 aaPredicted RBP11.91□□□□□ -0.5
CDC42BPB-205ENST00000559245 UBAC2Q8NBM4 344 aa11.91□□□□□ -0.5
CDC42BPB-205ENST00000559245 BEST4Q8NFU0 473 aa11.91□□□□□ -0.5
CDC42BPB-205ENST00000559245 SCARB1Q8WTV0 552 aa11.91□□□□□ -0.5
CDC42BPB-205ENST00000559245 RNF2Q99496 336 aa11.91□□□□□ -0.5
CDC42BPB-205ENST00000559245 SLC5A7Q9GZV3 580 aa11.91□□□□□ -0.5
CDC42BPB-205ENST00000559245 SMPXQ9UHP9 88 aa11.91□□□□□ -0.5
CDC42BPB-205ENST00000559245 ETV7Q9Y603 341 aa11.91□□□□□ -0.5
CDC42BPB-205ENST00000559245 F11RQ9Y624 299 aaKnown RBP11.91□□□□□ -0.5
CDC42BPB-205ENST00000559245 AGRNO00468 2067 aa11.91□□□□□ -0.5
CDC42BPB-205ENST00000559245 MUC4Q99102 2169 aa11.91□□□□□ -0.5
CDC42BPB-205ENST00000559245 NOTOA8MTQ0 251 aa11.9□□□□□ -0.5
CDC42BPB-205ENST00000559245 TFPI2P48307 235 aa11.9□□□□□ -0.5
CDC42BPB-205ENST00000559245 Q56UQ5 140 aa11.9□□□□□ -0.5
CDC42BPB-205ENST00000559245 GVQW1Q8N7I0 195 aa11.9□□□□□ -0.5
CDC42BPB-205ENST00000559245 OR1L8Q8NGR8 309 aa11.9□□□□□ -0.5
CDC42BPB-205ENST00000559245 OR51H1Q8NH63 302 aa11.9□□□□□ -0.5
CDC42BPB-205ENST00000559245 FCGR1BQ92637 280 aa11.9□□□□□ -0.5
CDC42BPB-205ENST00000559245 RHPN1-AS1Q9BWJ2 59 aa11.9□□□□□ -0.5
CDC42BPB-205ENST00000559245 PLEKHA2Q9HB19 425 aa11.9□□□□□ -0.5
CDC42BPB-205ENST00000559245 IGKV3-7A0A075B6H7 116 aa11.89□□□□□ -0.51
CDC42BPB-205ENST00000559245 IGHV7-4-1A0A0J9YVY3 117 aa11.89□□□□□ -0.51
CDC42BPB-205ENST00000559245 K7EIM0 57 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms