RNA–Protein interactions for RNA: ENST00000558989.1

SPG11-214, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 1,816 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-214ENST00000558989 IGLV2-23P01705 113 aa7.52□□□□□ -1.2
SPG11-214ENST00000558989 IGF1P05019 195 aa7.52□□□□□ -1.2
SPG11-214ENST00000558989 HLA-DMAP28067 261 aa7.52□□□□□ -1.2
SPG11-214ENST00000558989 PRSS3P35030 304 aa7.52□□□□□ -1.2
SPG11-214ENST00000558989 ALDH3B2P48448 385 aa7.52□□□□□ -1.2
SPG11-214ENST00000558989 RAB11AP62491 216 aa7.52□□□□□ -1.2
SPG11-214ENST00000558989 CFHR3Q02985 330 aa7.52□□□□□ -1.2
SPG11-214ENST00000558989 FOXE3Q13461 319 aa7.52□□□□□ -1.2
SPG11-214ENST00000558989 FXYD3Q14802 87 aa7.52□□□□□ -1.2
SPG11-214ENST00000558989 STHQ8IWL8 128 aa7.52□□□□□ -1.2
SPG11-214ENST00000558989 VKORC1L1Q8N0U8 176 aa7.52□□□□□ -1.2
SPG11-214ENST00000558989 OR5T1Q8NG75 326 aa7.52□□□□□ -1.2
SPG11-214ENST00000558989 ACOT12Q8WYK0 555 aa7.52□□□□□ -1.2
SPG11-214ENST00000558989 ALX4Q9H161 411 aaPredicted RBP7.52□□□□□ -1.2
SPG11-214ENST00000558989 GNB4Q9HAV0 340 aa7.52□□□□□ -1.2
SPG11-214ENST00000558989 RGS5O15539 181 aa7.52□□□□□ -1.21
SPG11-214ENST00000558989 SOX15O60248 233 aa7.52□□□□□ -1.21
SPG11-214ENST00000558989 PPYP01298 95 aa7.52□□□□□ -1.21
SPG11-214ENST00000558989 IGLV2-14P01704 120 aa7.52□□□□□ -1.21
SPG11-214ENST00000558989 IGHV3-11P01762 117 aa7.52□□□□□ -1.21
SPG11-214ENST00000558989 IGHG4P01861 327 aa7.52□□□□□ -1.21
SPG11-214ENST00000558989 ELANEP08246 267 aa7.52□□□□□ -1.21
SPG11-214ENST00000558989 EGR2P11161 476 aaPredicted RBP7.52□□□□□ -1.21
SPG11-214ENST00000558989 HOXD3P31249 432 aaPredicted RBP7.52□□□□□ -1.21
SPG11-214ENST00000558989 CBX5P45973 191 aa7.52□□□□□ -1.21
SPG11-214ENST00000558989 FGL1Q08830 312 aa7.52□□□□□ -1.21
SPG11-214ENST00000558989 CDK10Q15131 360 aa7.52□□□□□ -1.21
SPG11-214ENST00000558989 TNXAQ16473 311 aa7.52□□□□□ -1.21
SPG11-214ENST00000558989 ACTBL2Q562R1 376 aa7.52□□□□□ -1.21
SPG11-214ENST00000558989 ZNF660Q6AZW8 331 aaPredicted RBP7.52□□□□□ -1.21
SPG11-214ENST00000558989 PRR27Q6MZM9 219 aa7.52□□□□□ -1.21
SPG11-214ENST00000558989 SSX9Q7RTT3 188 aa7.52□□□□□ -1.21
SPG11-214ENST00000558989 OR5AP2Q8NGF4 316 aa7.52□□□□□ -1.21
SPG11-214ENST00000558989 OR5H2Q8NGV7 314 aa7.52□□□□□ -1.21
SPG11-214ENST00000558989 DDB2Q92466 427 aa7.52□□□□□ -1.21
SPG11-214ENST00000558989 ARPC1AQ92747 370 aa7.52□□□□□ -1.21
SPG11-214ENST00000558989 PHB2Q99623 299 aa7.52□□□□□ -1.21
SPG11-214ENST00000558989 RNF5Q99942 180 aa7.52□□□□□ -1.21
SPG11-214ENST00000558989 ZFP57Q9NU63 452 aa7.52□□□□□ -1.21
SPG11-214ENST00000558989 CCL24O00175 119 aa7.51□□□□□ -1.21
SPG11-214ENST00000558989 PSMB8P28062 276 aa7.51□□□□□ -1.21
SPG11-214ENST00000558989 HERV-K104P61576 105 aa7.51□□□□□ -1.21
SPG11-214ENST00000558989 BEAN1Q3B7T3 259 aa7.51□□□□□ -1.21
SPG11-214ENST00000558989 VMA21Q3ZAQ7 101 aa7.51□□□□□ -1.21
SPG11-214ENST00000558989 OR11H1Q8NG94 326 aa7.51□□□□□ -1.21
SPG11-214ENST00000558989 OR51H1Q8NH63 302 aa7.51□□□□□ -1.21
SPG11-214ENST00000558989 MOB3AQ96BX8 217 aa7.51□□□□□ -1.21
SPG11-214ENST00000558989 ADTRPQ96IZ2 230 aa7.51□□□□□ -1.21
SPG11-214ENST00000558989 ZNF2Q9BSG1 426 aaPredicted RBP7.51□□□□□ -1.21
SPG11-214ENST00000558989 PRELID3BQ9Y3B1 194 aa7.51□□□□□ -1.21
SPG11-214ENST00000558989 SULT1C2O00338 296 aa7.5□□□□□ -1.21
SPG11-214ENST00000558989 SAA1P0DJI8 122 aaPredicted RBP7.5□□□□□ -1.21
SPG11-214ENST00000558989 HRH1P35367 487 aa7.5□□□□□ -1.21
SPG11-214ENST00000558989 LGALS7P47929 136 aa7.5□□□□□ -1.21
SPG11-214ENST00000558989 TPPP2P59282 170 aa7.5□□□□□ -1.21
SPG11-214ENST00000558989 TMEM267Q0VDI3 215 aaPredicted RBP7.5□□□□□ -1.21
SPG11-214ENST00000558989 DYRK1AQ13627 763 aa7.5□□□□□ -1.21
SPG11-214ENST00000558989 ZNF562Q6V9R5 426 aa7.5□□□□□ -1.21
SPG11-214ENST00000558989 ZNF818PQ6ZRF7 136 aa7.5□□□□□ -1.21
SPG11-214ENST00000558989 LINC00482Q8N8I6 264 aa7.5□□□□□ -1.21
SPG11-214ENST00000558989 AP3S1Q92572 193 aa7.5□□□□□ -1.21
SPG11-214ENST00000558989 NUBP2Q9Y5Y2 271 aa7.5□□□□□ -1.21
SPG11-214ENST00000558989 CCDC160A6NGH7 325 aa7.5□□□□□ -1.21
SPG11-214ENST00000558989 MPPED1O15442 326 aa7.5□□□□□ -1.21
SPG11-214ENST00000558989 PRAF2O60831 178 aa7.5□□□□□ -1.21
SPG11-214ENST00000558989 CRYGBP07316 175 aa7.5□□□□□ -1.21
SPG11-214ENST00000558989 MYCNOSP40205 109 aa7.5□□□□□ -1.21
SPG11-214ENST00000558989 SSBP2P81877 361 aaPredicted RBP7.5□□□□□ -1.21
SPG11-214ENST00000558989 SAPCD1Q5SSQ6 148 aa7.5□□□□□ -1.21
SPG11-214ENST00000558989 C10orf55Q5SWW7 151 aa7.5□□□□□ -1.21
SPG11-214ENST00000558989 CD164L2Q6UWJ8 174 aa7.5□□□□□ -1.21
SPG11-214ENST00000558989 BTNL8Q6UX41 500 aa7.5□□□□□ -1.21
SPG11-214ENST00000558989 HAPLN4Q86UW8 402 aa7.5□□□□□ -1.21
SPG11-214ENST00000558989 ZNF491Q8N8L2 437 aa7.5□□□□□ -1.21
SPG11-214ENST00000558989 HSD17B10Q99714 261 aaKnown RBP7.5□□□□□ -1.21
SPG11-214ENST00000558989 SLC2A8Q9NY64 477 aa7.5□□□□□ -1.21
SPG11-214ENST00000558989 MSGN1A6NI15 193 aa7.49□□□□□ -1.21
SPG11-214ENST00000558989 SPRY2O43597 315 aa7.49□□□□□ -1.21
SPG11-214ENST00000558989 RAMP3O60896 148 aa7.49□□□□□ -1.21
SPG11-214ENST00000558989 SLC22A5O76082 557 aa7.49□□□□□ -1.21
SPG11-214ENST00000558989 IGLV1-40P01703 118 aa7.49□□□□□ -1.21
SPG11-214ENST00000558989 TRGV3P03979 118 aa7.49□□□□□ -1.21
SPG11-214ENST00000558989 CSN3P07498 182 aa7.49□□□□□ -1.21
SPG11-214ENST00000558989 MYOD1P15172 320 aa7.49□□□□□ -1.21
SPG11-214ENST00000558989 ADMP35318 185 aa7.49□□□□□ -1.21
SPG11-214ENST00000558989 SEC61GP60059 68 aa7.49□□□□□ -1.21
SPG11-214ENST00000558989 AADACL3Q5VUY0 350 aa7.49□□□□□ -1.21
SPG11-214ENST00000558989 SPAG16Q8N0X2 631 aa7.49□□□□□ -1.21
SPG11-214ENST00000558989 OSR1Q8TAX0 266 aaPredicted RBP7.49□□□□□ -1.21
SPG11-214ENST00000558989 C4orf3Q8WVX3 66 aa7.49□□□□□ -1.21
SPG11-214ENST00000558989 P2RX4Q99571 388 aa7.49□□□□□ -1.21
SPG11-214ENST00000558989 MFFQ9GZY8 342 aa7.49□□□□□ -1.21
SPG11-214ENST00000558989 ZNF430Q9H8G1 570 aaPredicted RBP7.49□□□□□ -1.21
SPG11-214ENST00000558989 COA4Q9NYJ1 87 aa7.49□□□□□ -1.21
SPG11-214ENST00000558989 VSIG4Q9Y279 399 aa7.49□□□□□ -1.21
SPG11-214ENST00000558989 PRH1P02810 166 aa7.48□□□□□ -1.21
SPG11-214ENST00000558989 CD40LGP29965 261 aa7.48□□□□□ -1.21
SPG11-214ENST00000558989 RPL5P46777 297 aaKnown RBP7.48□□□□□ -1.21
SPG11-214ENST00000558989 BRWD1-AS2P59051 145 aa7.48□□□□□ -1.21
SPG11-214ENST00000558989 TAS2R46P59540 309 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms