RNA–Protein interactions for RNA: ENST00000558890.5

LRRC28-211, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 978 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-211ENST00000558890 FAM201AQ5SY85 155 aa6.26□□□□□ -1.41
LRRC28-211ENST00000558890 LCN15Q6UWW0 184 aa6.26□□□□□ -1.41
LRRC28-211ENST00000558890 FAM216BQ8N7L0 139 aa6.26□□□□□ -1.41
LRRC28-211ENST00000558890 C8orf31Q8N9H6 132 aa6.26□□□□□ -1.41
LRRC28-211ENST00000558890 LINC01356Q8N9X3 169 aa6.26□□□□□ -1.41
LRRC28-211ENST00000558890 ZNRF1Q8ND25 227 aa6.26□□□□□ -1.41
LRRC28-211ENST00000558890 OR10G4Q8NGN3 311 aa6.26□□□□□ -1.41
LRRC28-211ENST00000558890 OR4A16Q8NH70 328 aa6.26□□□□□ -1.41
LRRC28-211ENST00000558890 MBD3L1Q8WWY6 194 aa6.26□□□□□ -1.41
LRRC28-211ENST00000558890 ADTRPQ96IZ2 230 aa6.26□□□□□ -1.41
LRRC28-211ENST00000558890 CCL13Q99616 98 aa6.26□□□□□ -1.41
LRRC28-211ENST00000558890 MAP1LC3BQ9GZQ8 125 aa6.26□□□□□ -1.41
LRRC28-211ENST00000558890 IFI27L2Q9H2X8 130 aa6.26□□□□□ -1.41
LRRC28-211ENST00000558890 SAV1Q9H4B6 383 aaPredicted RBP6.26□□□□□ -1.41
LRRC28-211ENST00000558890 TMEM160Q9NX00 188 aa6.26□□□□□ -1.41
LRRC28-211ENST00000558890 GFOD1Q9NXC2 390 aa6.26□□□□□ -1.41
LRRC28-211ENST00000558890 GNG13Q9P2W3 67 aa6.26□□□□□ -1.41
LRRC28-211ENST00000558890 RPUSD1Q9UJJ7 312 aaKnown RBP6.26□□□□□ -1.41
LRRC28-211ENST00000558890 GAB2Q9UQC2 676 aa6.26□□□□□ -1.41
LRRC28-211ENST00000558890 PUS1Q9Y606 427 aaKnown RBP eCLIP6.26□□□□□ -1.41
LRRC28-211ENST00000558890 RFNGQ9Y644 331 aa6.26□□□□□ -1.41
LRRC28-211ENST00000558890 LOC105371242A0A075B767 164 aa6.25□□□□□ -1.41
LRRC28-211ENST00000558890 A0A087X0M5 115 aa6.25□□□□□ -1.41
LRRC28-211ENST00000558890 IGHV2-70DA0A0C4DH43 119 aa6.25□□□□□ -1.41
LRRC28-211ENST00000558890 KBTBD11-OT1A0A1B0GTJ5 212 aa6.25□□□□□ -1.41
LRRC28-211ENST00000558890 A0A1B0GX30 115 aa6.25□□□□□ -1.41
LRRC28-211ENST00000558890 ZFP92A6NM28 416 aa6.25□□□□□ -1.41
LRRC28-211ENST00000558890 LINC00473A8K010 186 aa6.25□□□□□ -1.41
LRRC28-211ENST00000558890 H3BQ15 152 aa6.25□□□□□ -1.41
LRRC28-211ENST00000558890 CD5LO43866 347 aa6.25□□□□□ -1.41
LRRC28-211ENST00000558890 FCN3O75636 299 aa6.25□□□□□ -1.41
LRRC28-211ENST00000558890 IFNA17P01571 189 aa6.25□□□□□ -1.41
LRRC28-211ENST00000558890 CRYBA1P05813 215 aa6.25□□□□□ -1.41
LRRC28-211ENST00000558890 CGB3P0DN86 165 aa6.25□□□□□ -1.41
LRRC28-211ENST00000558890 CGB7P0DN87 165 aa6.25□□□□□ -1.41
LRRC28-211ENST00000558890 NQO2P16083 231 aa6.25□□□□□ -1.41
LRRC28-211ENST00000558890 AKR1C3P42330 323 aa6.25□□□□□ -1.41
LRRC28-211ENST00000558890 RAB13P51153 203 aa6.25□□□□□ -1.41
LRRC28-211ENST00000558890 SPCS3P61009 180 aa6.25□□□□□ -1.41
LRRC28-211ENST00000558890 CCL20P78556 96 aa6.25□□□□□ -1.41
LRRC28-211ENST00000558890 RNF212Q495C1 297 aa6.25□□□□□ -1.41
LRRC28-211ENST00000558890 NCR3LG1Q68D85 454 aa6.25□□□□□ -1.41
LRRC28-211ENST00000558890 FAM53AQ6NSI3 398 aaPredicted RBP6.25□□□□□ -1.41
LRRC28-211ENST00000558890 LYPD2Q6UXB3 125 aa6.25□□□□□ -1.41
LRRC28-211ENST00000558890 RBMS3Q6XE24 437 aaKnown RBP6.25□□□□□ -1.41
LRRC28-211ENST00000558890 DEFB108BQ8NET1 73 aa6.25□□□□□ -1.41
LRRC28-211ENST00000558890 TNFRSF14Q92956 283 aa6.25□□□□□ -1.41
LRRC28-211ENST00000558890 TVP23CQ96ET8 276 aa6.25□□□□□ -1.41
LRRC28-211ENST00000558890 RCC1LQ96I51 464 aaKnown RBP6.25□□□□□ -1.41
LRRC28-211ENST00000558890 P2RX4Q99571 388 aa6.25□□□□□ -1.41
LRRC28-211ENST00000558890 RARRES2Q99969 163 aa6.25□□□□□ -1.41
LRRC28-211ENST00000558890 NIPSNAP3BQ9BS92 247 aa6.25□□□□□ -1.41
LRRC28-211ENST00000558890 C20orf24Q9BUV8 137 aa6.25□□□□□ -1.41
LRRC28-211ENST00000558890 QTRT1Q9BXR0 403 aaKnown RBP6.25□□□□□ -1.41
LRRC28-211ENST00000558890 ACTR3CQ9C0K3 210 aaPredicted RBP6.25□□□□□ -1.41
LRRC28-211ENST00000558890 ENY2Q9NPA8 101 aa6.25□□□□□ -1.41
LRRC28-211ENST00000558890 KCNIP2Q9NS61 270 aa6.25□□□□□ -1.41
LRRC28-211ENST00000558890 RPRMQ9NS64 109 aa6.25□□□□□ -1.41
LRRC28-211ENST00000558890 IDI2-AS1Q9NZ38 188 aa6.25□□□□□ -1.41
LRRC28-211ENST00000558890 PRELID1Q9Y255 219 aa6.25□□□□□ -1.41
LRRC28-211ENST00000558890 DNHD1Q96M86 4753 aa6.24□□□□□ -1.41
LRRC28-211ENST00000558890 CTXND1A0A1B0GTU2 59 aa6.24□□□□□ -1.41
LRRC28-211ENST00000558890 MEX3AA1L020 520 aaKnown RBP6.24□□□□□ -1.41
LRRC28-211ENST00000558890 COLCA2A8K830 154 aa6.24□□□□□ -1.41
LRRC28-211ENST00000558890 IFNA4P05014 189 aa6.24□□□□□ -1.41
LRRC28-211ENST00000558890 HOXB4P17483 251 aaPredicted RBP6.24□□□□□ -1.41
LRRC28-211ENST00000558890 HOXA1P49639 335 aaPredicted RBP6.24□□□□□ -1.41
LRRC28-211ENST00000558890 OR2B8PP59922 312 aa6.24□□□□□ -1.41
LRRC28-211ENST00000558890 PNRC1Q12796 327 aaPredicted RBP6.24□□□□□ -1.41
LRRC28-211ENST00000558890 C17orf58Q2M2W7 97 aa6.24□□□□□ -1.41
LRRC28-211ENST00000558890 VWC2Q2TAL6 325 aa6.24□□□□□ -1.41
LRRC28-211ENST00000558890 ACOT6Q3I5F7 207 aaPredicted RBP6.24□□□□□ -1.41
LRRC28-211ENST00000558890 AARDQ4LEZ3 155 aa6.24□□□□□ -1.41
LRRC28-211ENST00000558890 FFAR4Q5NUL3 377 aa6.24□□□□□ -1.41
LRRC28-211ENST00000558890 HEPN1Q6WQI6 88 aa6.24□□□□□ -1.41
LRRC28-211ENST00000558890 SLC35E3Q7Z769 313 aa6.24□□□□□ -1.41
LRRC28-211ENST00000558890 CENPVQ7Z7K6 275 aaPredicted RBP6.24□□□□□ -1.41
LRRC28-211ENST00000558890 ZNF429Q86V71 674 aa6.24□□□□□ -1.41
LRRC28-211ENST00000558890 CYB561D1Q8N8Q1 229 aa6.24□□□□□ -1.41
LRRC28-211ENST00000558890 OR52E5Q8NH55 327 aa6.24□□□□□ -1.41
LRRC28-211ENST00000558890 LHX4Q969G2 390 aa6.24□□□□□ -1.41
LRRC28-211ENST00000558890 HIST1H2BAQ96A08 127 aa6.24□□□□□ -1.41
LRRC28-211ENST00000558890 ZNF714Q96N38 554 aa6.24□□□□□ -1.41
LRRC28-211ENST00000558890 AGMATQ9BSE5 352 aa6.24□□□□□ -1.41
LRRC28-211ENST00000558890 MANBALQ9NQG1 85 aa6.24□□□□□ -1.41
LRRC28-211ENST00000558890 SLC39A9Q9NUM3 307 aa6.24□□□□□ -1.41
LRRC28-211ENST00000558890 VAX2Q9UIW0 290 aa6.24□□□□□ -1.41
LRRC28-211ENST00000558890 INSIG2Q9Y5U4 225 aa6.24□□□□□ -1.41
LRRC28-211ENST00000558890 FBN1P35555 2871 aaKnown RBP6.24□□□□□ -1.41
LRRC28-211ENST00000558890 A0A087WWC5 75 aa6.23□□□□□ -1.41
LRRC28-211ENST00000558890 B4DEV8 164 aa6.23□□□□□ -1.41
LRRC28-211ENST00000558890 MPDU1O75352 247 aa6.23□□□□□ -1.41
LRRC28-211ENST00000558890 OR2C1O95371 312 aa6.23□□□□□ -1.41
LRRC28-211ENST00000558890 HRASP01112 189 aa6.23□□□□□ -1.41
LRRC28-211ENST00000558890 IFNA10P01566 189 aa6.23□□□□□ -1.41
LRRC28-211ENST00000558890 S100A6P06703 90 aa6.23□□□□□ -1.41
LRRC28-211ENST00000558890 NDUFB7P17568 137 aa6.23□□□□□ -1.41
LRRC28-211ENST00000558890 RAB5AP20339 215 aa6.23□□□□□ -1.41
LRRC28-211ENST00000558890 ZFP36P26651 326 aaKnown RBP6.23□□□□□ -1.41
LRRC28-211ENST00000558890 PSMB3P49720 205 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms