RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 UFD1Q92890 307 aa7.14□□□□□ -1.27
SPG11-212ENST00000558790 EEF1AKMT3Q96AZ1 226 aa7.14□□□□□ -1.27
SPG11-212ENST00000558790 FYTTD1Q96QD9 318 aaKnown RBP7.14□□□□□ -1.27
SPG11-212ENST00000558790 DCUN1D5Q9BTE7 237 aa7.14□□□□□ -1.27
SPG11-212ENST00000558790 UBQLN2Q9UHD9 624 aa7.14□□□□□ -1.27
SPG11-212ENST00000558790 KLK5Q9Y337 293 aaPredicted RBP7.14□□□□□ -1.27
SPG11-212ENST00000558790 J3QRK9 145 aa7.13□□□□□ -1.27
SPG11-212ENST00000558790 S1PR2O95136 353 aa7.13□□□□□ -1.27
SPG11-212ENST00000558790 TNFRSF6BO95407 300 aa7.13□□□□□ -1.27
SPG11-212ENST00000558790 IGLV2-14P01704 120 aa7.13□□□□□ -1.27
SPG11-212ENST00000558790 REG1AP05451 166 aa7.13□□□□□ -1.27
SPG11-212ENST00000558790 ZNF735P0CB33 412 aa7.13□□□□□ -1.27
SPG11-212ENST00000558790 MYOD1P15172 320 aa7.13□□□□□ -1.27
SPG11-212ENST00000558790 HIST1H1DP16402 221 aaKnown RBP7.13□□□□□ -1.27
SPG11-212ENST00000558790 PSMB6P28072 239 aa7.13□□□□□ -1.27
SPG11-212ENST00000558790 MAP2K4P45985 399 aa7.13□□□□□ -1.27
SPG11-212ENST00000558790 RPL30P62888 115 aaKnown RBP7.13□□□□□ -1.27
SPG11-212ENST00000558790 ARFRP1Q13795 201 aa7.13□□□□□ -1.27
SPG11-212ENST00000558790 ODF3L2Q3SX64 289 aa7.13□□□□□ -1.27
SPG11-212ENST00000558790 FAM106AQ4KMX7 169 aa7.13□□□□□ -1.27
SPG11-212ENST00000558790 RNASE12Q5GAN4 147 aaKnown RBP7.13□□□□□ -1.27
SPG11-212ENST00000558790 OR4A47Q6IF82 309 aa7.13□□□□□ -1.27
SPG11-212ENST00000558790 OR10R2Q8NGX6 335 aa7.13□□□□□ -1.27
SPG11-212ENST00000558790 TMEM167AQ8TBQ9 72 aa7.13□□□□□ -1.27
SPG11-212ENST00000558790 PHLDA1Q8WV24 401 aaPredicted RBP7.13□□□□□ -1.27
SPG11-212ENST00000558790 OR51E2Q9H255 320 aa7.13□□□□□ -1.27
SPG11-212ENST00000558790 C8orf4Q9NR00 106 aa7.13□□□□□ -1.27
SPG11-212ENST00000558790 SLC2A9Q9NRM0 540 aa7.13□□□□□ -1.27
SPG11-212ENST00000558790 MRPS7Q9Y2R9 242 aaKnown RBP7.13□□□□□ -1.27
SPG11-212ENST00000558790 AGRNO00468 2067 aa7.13□□□□□ -1.27
SPG11-212ENST00000558790 IGLV11-55A0A075B6I3 123 aa7.12□□□□□ -1.27
SPG11-212ENST00000558790 TRAV25A0A0B4J276 109 aa7.12□□□□□ -1.27
SPG11-212ENST00000558790 IGKV1D-13A0A0B4J2D9 117 aa7.12□□□□□ -1.27
SPG11-212ENST00000558790 IGHV3-35A0A0C4DH35 117 aa7.12□□□□□ -1.27
SPG11-212ENST00000558790 CGB1A6NKQ9 187 aa7.12□□□□□ -1.27
SPG11-212ENST00000558790 PTGES3LE9PB15 166 aa7.12□□□□□ -1.27
SPG11-212ENST00000558790 ARL6IP5O75915 188 aa7.12□□□□□ -1.27
SPG11-212ENST00000558790 NUDT3O95989 172 aa7.12□□□□□ -1.27
SPG11-212ENST00000558790 CRYGCP07315 174 aa7.12□□□□□ -1.27
SPG11-212ENST00000558790 HSMCR30P0CW71 290 aa7.12□□□□□ -1.27
SPG11-212ENST00000558790 C8orf88P0DMB2 117 aa7.12□□□□□ -1.27
SPG11-212ENST00000558790 IGKV1-13P0DP09 117 aa7.12□□□□□ -1.27
SPG11-212ENST00000558790 CD36P16671 472 aa7.12□□□□□ -1.27
SPG11-212ENST00000558790 CTRB1P17538 263 aa7.12□□□□□ -1.27
SPG11-212ENST00000558790 NFYAP23511 347 aaPredicted RBP7.12□□□□□ -1.27
SPG11-212ENST00000558790 GADD45AP24522 165 aa7.12□□□□□ -1.27
SPG11-212ENST00000558790 GPR183P32249 361 aa7.12□□□□□ -1.27
SPG11-212ENST00000558790 OR10A3P58181 314 aa7.12□□□□□ -1.27
SPG11-212ENST00000558790 FABP5Q01469 135 aa7.12□□□□□ -1.27
SPG11-212ENST00000558790 IRF3Q14653 427 aa7.12□□□□□ -1.27
SPG11-212ENST00000558790 KLK9Q2XQG4 91 aa7.12□□□□□ -1.27
SPG11-212ENST00000558790 ZNF585BQ52M93 769 aa7.12□□□□□ -1.27
SPG11-212ENST00000558790 LGALS9CQ6DKI2 356 aa7.12□□□□□ -1.27
SPG11-212ENST00000558790 CTRB2Q6GPI1 263 aa7.12□□□□□ -1.27
SPG11-212ENST00000558790 RBPMS2Q6ZRY4 209 aaKnown RBP7.12□□□□□ -1.27
SPG11-212ENST00000558790 Q6ZS49 121 aa7.12□□□□□ -1.27
SPG11-212ENST00000558790 PUSL1Q8N0Z8 303 aaKnown RBP7.12□□□□□ -1.27
SPG11-212ENST00000558790 OR4S2Q8NH73 311 aa7.12□□□□□ -1.27
SPG11-212ENST00000558790 VSTM2AQ8TAG5 236 aa7.12□□□□□ -1.27
SPG11-212ENST00000558790 RNF183Q96D59 192 aa7.12□□□□□ -1.27
SPG11-212ENST00000558790 OR2A7Q96R45 310 aa7.12□□□□□ -1.27
SPG11-212ENST00000558790 KLK9Q9UKQ9 250 aa7.12□□□□□ -1.27
SPG11-212ENST00000558790 ELF5Q9UKW6 265 aaPredicted RBP7.12□□□□□ -1.27
SPG11-212ENST00000558790 RAB22AQ9UL26 194 aa7.12□□□□□ -1.27
SPG11-212ENST00000558790 RBMX2Q9Y388 322 aaKnown RBP7.12□□□□□ -1.27
SPG11-212ENST00000558790 PRELID3BQ9Y3B1 194 aa7.12□□□□□ -1.27
SPG11-212ENST00000558790 V9GY05 133 aa7.12□□□□□ -1.27
SPG11-212ENST00000558790 TRBV7-1A0A0A6YYK4 115 aa7.11□□□□□ -1.27
SPG11-212ENST00000558790 UBE2CO00762 179 aa7.11□□□□□ -1.27
SPG11-212ENST00000558790 DHFRP00374 187 aa7.11□□□□□ -1.27
SPG11-212ENST00000558790 CLEC3BP05452 202 aa7.11□□□□□ -1.27
SPG11-212ENST00000558790 RPL35AP18077 110 aaKnown RBP7.11□□□□□ -1.27
SPG11-212ENST00000558790 FCGR2BP31994 310 aaPredicted RBP7.11□□□□□ -1.27
SPG11-212ENST00000558790 MAS1LP35410 378 aa7.11□□□□□ -1.27
SPG11-212ENST00000558790 BRWD1-AS2P59051 145 aa7.11□□□□□ -1.27
SPG11-212ENST00000558790 EIF4EBP1Q13541 118 aaPredicted RBP7.11□□□□□ -1.27
SPG11-212ENST00000558790 RCN1Q15293 331 aa7.11□□□□□ -1.27
SPG11-212ENST00000558790 TRAM1Q15629 374 aa7.11□□□□□ -1.27
SPG11-212ENST00000558790 KRTAP15-1Q3LI76 137 aa7.11□□□□□ -1.27
SPG11-212ENST00000558790 SSX9Q7RTT3 188 aa7.11□□□□□ -1.27
SPG11-212ENST00000558790 TMEM217Q8N7C4 229 aa7.11□□□□□ -1.27
SPG11-212ENST00000558790 TCTEX1D2Q8WW35 142 aa7.11□□□□□ -1.27
SPG11-212ENST00000558790 TMEM190Q8WZ59 177 aa7.11□□□□□ -1.27
SPG11-212ENST00000558790 MARC2Q969Z3 335 aa7.11□□□□□ -1.27
SPG11-212ENST00000558790 SPAG8Q99932 426 aaPredicted RBP7.11□□□□□ -1.27
SPG11-212ENST00000558790 MGAT4CQ9UBM8 478 aa7.11□□□□□ -1.27
SPG11-212ENST00000558790 SPATA2Q9UM82 520 aa7.11□□□□□ -1.27
SPG11-212ENST00000558790 OR2W1Q9Y3N9 320 aa7.11□□□□□ -1.27
SPG11-212ENST00000558790 KIR2DL5BA0A0G2JN68 375 aa7.1□□□□□ -1.27
SPG11-212ENST00000558790 KIR2DL5BA0A0G2JPC4 375 aa7.1□□□□□ -1.27
SPG11-212ENST00000558790 TSPAN4O14817 238 aa7.1□□□□□ -1.27
SPG11-212ENST00000558790 HLA-DQB1P01920 261 aa7.1□□□□□ -1.27
SPG11-212ENST00000558790 DEFA4P12838 97 aa7.1□□□□□ -1.27
SPG11-212ENST00000558790 HIST1H1BP16401 226 aaKnown RBP7.1□□□□□ -1.27
SPG11-212ENST00000558790 GALP22466 123 aa7.1□□□□□ -1.27
SPG11-212ENST00000558790 DTYMKP23919 212 aa7.1□□□□□ -1.27
SPG11-212ENST00000558790 CRHBPP24387 322 aa7.1□□□□□ -1.27
SPG11-212ENST00000558790 PSMA1P25786 263 aaKnown RBP7.1□□□□□ -1.27
SPG11-212ENST00000558790 TALDO1P37837 337 aa7.1□□□□□ -1.27
SPG11-212ENST00000558790 PSMD7P51665 324 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms