RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 VCX3AQ9NNX9 186 aa6.1□□□□□ -1.43
TRAF3-205ENST00000558700 ZC4H2Q9NQZ6 224 aa6.1□□□□□ -1.43
TRAF3-205ENST00000558700 CCL28Q9NRJ3 127 aa6.1□□□□□ -1.43
TRAF3-205ENST00000558700 TECRQ9NZ01 308 aaKnown RBP6.1□□□□□ -1.43
TRAF3-205ENST00000558700 CEPT1Q9Y6K0 416 aa6.1□□□□□ -1.43
TRAF3-205ENST00000558700 IGLV11-55A0A075B6I3 123 aa6.09□□□□□ -1.43
TRAF3-205ENST00000558700 CYB5BO43169 146 aa6.09□□□□□ -1.43
TRAF3-205ENST00000558700 HPRT1P00492 218 aa6.09□□□□□ -1.43
TRAF3-205ENST00000558700 CRYGCP07315 174 aa6.09□□□□□ -1.43
TRAF3-205ENST00000558700 FGF2P09038 288 aa6.09□□□□□ -1.43
TRAF3-205ENST00000558700 FOLR2P14207 255 aa6.09□□□□□ -1.43
TRAF3-205ENST00000558700 AREGP15514 252 aa6.09□□□□□ -1.43
TRAF3-205ENST00000558700 NQO2P16083 231 aa6.09□□□□□ -1.43
TRAF3-205ENST00000558700 CTRB1P17538 263 aa6.09□□□□□ -1.43
TRAF3-205ENST00000558700 GCSHP23434 173 aa6.09□□□□□ -1.43
TRAF3-205ENST00000558700 RPS19P39019 145 aaKnown RBP6.09□□□□□ -1.43
TRAF3-205ENST00000558700 ERVK-16P61578 105 aa6.09□□□□□ -1.43
TRAF3-205ENST00000558700 POU2AF1Q16633 256 aa6.09□□□□□ -1.43
TRAF3-205ENST00000558700 GUCA2BQ16661 112 aa6.09□□□□□ -1.43
TRAF3-205ENST00000558700 CD300EQ496F6 205 aaPredicted RBP6.09□□□□□ -1.43
TRAF3-205ENST00000558700 FAM106AQ4KMX7 169 aa6.09□□□□□ -1.43
TRAF3-205ENST00000558700 UBE2NLQ5JXB2 153 aa6.09□□□□□ -1.43
TRAF3-205ENST00000558700 AADACL3Q5VUY0 350 aa6.09□□□□□ -1.43
TRAF3-205ENST00000558700 ZFAND6Q6FIF0 208 aa6.09□□□□□ -1.43
TRAF3-205ENST00000558700 CTRB2Q6GPI1 263 aa6.09□□□□□ -1.43
TRAF3-205ENST00000558700 CLEC19AQ6UXS0 136 aa6.09□□□□□ -1.43
TRAF3-205ENST00000558700 C19orf35Q6ZS72 473 aa6.09□□□□□ -1.43
TRAF3-205ENST00000558700 OR5AP2Q8NGF4 316 aa6.09□□□□□ -1.43
TRAF3-205ENST00000558700 OR51H1Q8NH63 302 aa6.09□□□□□ -1.43
TRAF3-205ENST00000558700 CD300LFQ8TDQ1 290 aa6.09□□□□□ -1.43
TRAF3-205ENST00000558700 CXorf58Q96LI9 332 aa6.09□□□□□ -1.43
TRAF3-205ENST00000558700 NEURL2Q9BR09 285 aa6.09□□□□□ -1.43
TRAF3-205ENST00000558700 SRSF8Q9BRL6 282 aaKnown RBP6.09□□□□□ -1.43
TRAF3-205ENST00000558700 COMMD5Q9GZQ3 224 aa6.09□□□□□ -1.43
TRAF3-205ENST00000558700 RNF167Q9H6Y7 350 aa6.09□□□□□ -1.43
TRAF3-205ENST00000558700 PLEKHA2Q9HB19 425 aa6.09□□□□□ -1.43
TRAF3-205ENST00000558700 EHFQ9NZC4 300 aa6.09□□□□□ -1.43
TRAF3-205ENST00000558700 COMMD9Q9P000 198 aa6.09□□□□□ -1.43
TRAF3-205ENST00000558700 THYN1Q9P016 225 aa6.09□□□□□ -1.43
TRAF3-205ENST00000558700 TRBV7-1A0A0A6YYK4 115 aa6.08□□□□□ -1.44
TRAF3-205ENST00000558700 LCE6AA0A183 80 aa6.08□□□□□ -1.44
TRAF3-205ENST00000558700 A0A1B0GW64 132 aa6.08□□□□□ -1.44
TRAF3-205ENST00000558700 TMEM213A2RRL7 107 aa6.08□□□□□ -1.44
TRAF3-205ENST00000558700 MEIS3P1A6NDR6 274 aa6.08□□□□□ -1.44
TRAF3-205ENST00000558700 MFSD2BA6NFX1 497 aa6.08□□□□□ -1.44
TRAF3-205ENST00000558700 E7EUB6 86 aa6.08□□□□□ -1.44
TRAF3-205ENST00000558700 SULT1C2O00338 296 aa6.08□□□□□ -1.44
TRAF3-205ENST00000558700 XRCC3O43542 346 aa6.08□□□□□ -1.44
TRAF3-205ENST00000558700 S1PR2O95136 353 aa6.08□□□□□ -1.44
TRAF3-205ENST00000558700 OR2C1O95371 312 aa6.08□□□□□ -1.44
TRAF3-205ENST00000558700 IGHV3-23P01764 117 aa6.08□□□□□ -1.44
TRAF3-205ENST00000558700 HLA-AP01891 365 aaKnown RBP6.08□□□□□ -1.44
TRAF3-205ENST00000558700 REG1AP05451 166 aa6.08□□□□□ -1.44
TRAF3-205ENST00000558700 PTHLHP12272 177 aa6.08□□□□□ -1.44
TRAF3-205ENST00000558700 BRWD1-AS2P59051 145 aa6.08□□□□□ -1.44
TRAF3-205ENST00000558700 TAS2R46P59540 309 aa6.08□□□□□ -1.44
TRAF3-205ENST00000558700 OR2B8PP59922 312 aa6.08□□□□□ -1.44
TRAF3-205ENST00000558700 KLK9Q2XQG4 91 aa6.08□□□□□ -1.44
TRAF3-205ENST00000558700 DEFB114Q30KQ6 69 aa6.08□□□□□ -1.44
TRAF3-205ENST00000558700 TMEM69Q5SWH9 247 aa6.08□□□□□ -1.44
TRAF3-205ENST00000558700 ADAMTSL5Q6ZMM2 481 aa6.08□□□□□ -1.44
TRAF3-205ENST00000558700 ZNF818PQ6ZRF7 136 aa6.08□□□□□ -1.44
TRAF3-205ENST00000558700 SLC16A13Q7RTY0 426 aa6.08□□□□□ -1.44
TRAF3-205ENST00000558700 HSD17B13Q7Z5P4 300 aaPredicted RBP6.08□□□□□ -1.44
TRAF3-205ENST00000558700 GPHB5Q86YW7 130 aa6.08□□□□□ -1.44
TRAF3-205ENST00000558700 DMBX1Q8NFW5 382 aa6.08□□□□□ -1.44
TRAF3-205ENST00000558700 IL17DQ8TAD2 202 aa6.08□□□□□ -1.44
TRAF3-205ENST00000558700 GIMAP1Q8WWP7 306 aa6.08□□□□□ -1.44
TRAF3-205ENST00000558700 MARC2Q969Z3 335 aa6.08□□□□□ -1.44
TRAF3-205ENST00000558700 QTRT1Q9BXR0 403 aaKnown RBP6.08□□□□□ -1.44
TRAF3-205ENST00000558700 SRD5A3Q9H8P0 318 aa6.08□□□□□ -1.44
TRAF3-205ENST00000558700 KLK9Q9UKQ9 250 aa6.08□□□□□ -1.44
TRAF3-205ENST00000558700 IGLC7A0M8Q6 106 aa6.07□□□□□ -1.44
TRAF3-205ENST00000558700 MARCH11A6NNE9 402 aa6.07□□□□□ -1.44
TRAF3-205ENST00000558700 UPK2O00526 184 aa6.07□□□□□ -1.44
TRAF3-205ENST00000558700 NDUFB8O95169 186 aa6.07□□□□□ -1.44
TRAF3-205ENST00000558700 RLN1P04808 185 aa6.07□□□□□ -1.44
TRAF3-205ENST00000558700 FCER2P06734 321 aa6.07□□□□□ -1.44
TRAF3-205ENST00000558700 CD7P09564 240 aa6.07□□□□□ -1.44
TRAF3-205ENST00000558700 MYOD1P15172 320 aa6.07□□□□□ -1.44
TRAF3-205ENST00000558700 GPR183P32249 361 aa6.07□□□□□ -1.44
TRAF3-205ENST00000558700 TAS2R20P59543 309 aa6.07□□□□□ -1.44
TRAF3-205ENST00000558700 ANKRD55Q3KP44 614 aa6.07□□□□□ -1.44
TRAF3-205ENST00000558700 ZNF57Q68EA5 555 aaPredicted RBP6.07□□□□□ -1.44
TRAF3-205ENST00000558700 CMTM1Q8IZ96 169 aa6.07□□□□□ -1.44
TRAF3-205ENST00000558700 TMEM61Q8N0U2 210 aa6.07□□□□□ -1.44
TRAF3-205ENST00000558700 SAMD12Q8N8I0 201 aa6.07□□□□□ -1.44
TRAF3-205ENST00000558700 GDPD1Q8N9F7 314 aa6.07□□□□□ -1.44
TRAF3-205ENST00000558700 OR5H2Q8NGV7 314 aa6.07□□□□□ -1.44
TRAF3-205ENST00000558700 CACNG8Q8WXS5 425 aa6.07□□□□□ -1.44
TRAF3-205ENST00000558700 MOB3AQ96BX8 217 aa6.07□□□□□ -1.44
TRAF3-205ENST00000558700 S100A16Q96FQ6 103 aaKnown RBP6.07□□□□□ -1.44
TRAF3-205ENST00000558700 FXYD6Q9H0Q3 95 aa6.07□□□□□ -1.44
TRAF3-205ENST00000558700 WFDC10AQ9H1F0 79 aa6.07□□□□□ -1.44
TRAF3-205ENST00000558700 HIPK2Q9H2X6 1198 aa6.07□□□□□ -1.44
TRAF3-205ENST00000558700 RETNQ9HD89 108 aa6.07□□□□□ -1.44
TRAF3-205ENST00000558700 ANAPC10Q9UM13 185 aa6.07□□□□□ -1.44
TRAF3-205ENST00000558700 UFC1Q9Y3C8 167 aa6.07□□□□□ -1.44
TRAF3-205ENST00000558700 DMRT1Q9Y5R6 373 aa6.07□□□□□ -1.44
TRAF3-205ENST00000558700 S4R3C0 116 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms