RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 HINT2Q9BX68 163 aa13.63□□□□□ -0.23
TPM1-214ENST00000558544 QTRT1Q9BXR0 403 aaKnown RBP13.63□□□□□ -0.23
TPM1-214ENST00000558544 A0A0B4J2A0 478 aa13.62□□□□□ -0.23
TPM1-214ENST00000558544 A0A1W2PRX2 142 aa13.62□□□□□ -0.23
TPM1-214ENST00000558544 RAB25P57735 213 aa13.62□□□□□ -0.23
TPM1-214ENST00000558544 FAM219AQ8IW50 185 aa13.62□□□□□ -0.23
TPM1-214ENST00000558544 RNF152Q8N8N0 203 aa13.62□□□□□ -0.23
TPM1-214ENST00000558544 OR52B4Q8NGK2 314 aa13.62□□□□□ -0.23
TPM1-214ENST00000558544 OR1L8Q8NGR8 309 aa13.62□□□□□ -0.23
TPM1-214ENST00000558544 FAM110DQ8TAY7 271 aaPredicted RBP13.62□□□□□ -0.23
TPM1-214ENST00000558544 LSM10Q969L4 123 aaKnown RBP13.62□□□□□ -0.23
TPM1-214ENST00000558544 GPR146Q96CH1 333 aa13.62□□□□□ -0.23
TPM1-214ENST00000558544 KLK15Q9H2R5 256 aa13.62□□□□□ -0.23
TPM1-214ENST00000558544 ZNF355PQ9NSJ1 428 aa13.62□□□□□ -0.23
TPM1-214ENST00000558544 COA4Q9NYJ1 87 aa13.62□□□□□ -0.23
TPM1-214ENST00000558544 FKBP11Q9NYL4 201 aa13.62□□□□□ -0.23
TPM1-214ENST00000558544 SHPKQ9UHJ6 478 aa13.62□□□□□ -0.23
TPM1-214ENST00000558544 TSSC4Q9Y5U2 329 aaPredicted RBP13.62□□□□□ -0.23
TPM1-214ENST00000558544 REG1AP05451 166 aa13.61□□□□□ -0.23
TPM1-214ENST00000558544 TRAPPC2P0DI81 140 aa13.61□□□□□ -0.23
TPM1-214ENST00000558544 TRAPPC2BP0DI82 140 aa13.61□□□□□ -0.23
TPM1-214ENST00000558544 AREGP15514 252 aa13.61□□□□□ -0.23
TPM1-214ENST00000558544 BCAP31P51572 246 aa13.61□□□□□ -0.23
TPM1-214ENST00000558544 TMEM65Q6PI78 240 aa13.61□□□□□ -0.23
TPM1-214ENST00000558544 Q6ZRM9 215 aa13.61□□□□□ -0.23
TPM1-214ENST00000558544 NDUFA11Q86Y39 141 aa13.61□□□□□ -0.23
TPM1-214ENST00000558544 LRTM2Q8N967 370 aa13.61□□□□□ -0.23
TPM1-214ENST00000558544 OR10W1Q8NGF6 305 aa13.61□□□□□ -0.23
TPM1-214ENST00000558544 OR5B3Q8NH48 314 aa13.61□□□□□ -0.23
TPM1-214ENST00000558544 MS4A10Q96PG2 267 aa13.61□□□□□ -0.23
TPM1-214ENST00000558544 NDUFA4L2Q9NRX3 87 aa13.61□□□□□ -0.23
TPM1-214ENST00000558544 CACNG5Q9UF02 275 aa13.61□□□□□ -0.23
TPM1-214ENST00000558544 CMYA5Q8N3K9 4069 aa13.61□□□□□ -0.23
TPM1-214ENST00000558544 ADARB2-AS1A8MUL3 147 aa13.6□□□□□ -0.23
TPM1-214ENST00000558544 INMT-MINDY4F8WBC2 141 aa13.6□□□□□ -0.23
TPM1-214ENST00000558544 ST8SIA3O43173 380 aa13.6□□□□□ -0.23
TPM1-214ENST00000558544 RAB9AP51151 201 aa13.6□□□□□ -0.23
TPM1-214ENST00000558544 RPL23AP62750 156 aaKnown RBP13.6□□□□□ -0.23
TPM1-214ENST00000558544 C19orf35Q6ZS72 473 aa13.6□□□□□ -0.23
TPM1-214ENST00000558544 C18orf65Q6ZTR6 163 aa13.6□□□□□ -0.23
TPM1-214ENST00000558544 TTC9CQ8N5M4 171 aa13.6□□□□□ -0.23
TPM1-214ENST00000558544 ALX4Q9H161 411 aaPredicted RBP13.6□□□□□ -0.23
TPM1-214ENST00000558544 DUXBA0A1W2PPF3 345 aa13.59□□□□□ -0.23
TPM1-214ENST00000558544 IGLC7A0M8Q6 106 aa13.59□□□□□ -0.23
TPM1-214ENST00000558544 DUS4LO95620 317 aaKnown RBP13.59□□□□□ -0.23
TPM1-214ENST00000558544 PRH1P02810 166 aa13.59□□□□□ -0.23
TPM1-214ENST00000558544 MECP2P51608 486 aaKnown RBP13.59□□□□□ -0.23
TPM1-214ENST00000558544 TPPP2P59282 170 aa13.59□□□□□ -0.23
TPM1-214ENST00000558544 SPINK9Q5DT21 86 aa13.59□□□□□ -0.23
TPM1-214ENST00000558544 NMSQ5H8A3 153 aa13.59□□□□□ -0.23
TPM1-214ENST00000558544 THOC7Q6I9Y2 204 aaKnown RBP13.59□□□□□ -0.23
TPM1-214ENST00000558544 ZNF429Q86V71 674 aa13.59□□□□□ -0.23
TPM1-214ENST00000558544 COQ8AQ8NI60 647 aa13.59□□□□□ -0.23
TPM1-214ENST00000558544 SEC22CQ9BRL7 303 aa13.59□□□□□ -0.23
TPM1-214ENST00000558544 ZNF257Q9Y2Q1 563 aa13.59□□□□□ -0.23
TPM1-214ENST00000558544 PIGBOS1A0A0B4J2F0 54 aa13.58□□□□□ -0.23
TPM1-214ENST00000558544 NPIPB5A8MRT5 1133 aa13.58□□□□□ -0.23
TPM1-214ENST00000558544 H3BUA1 57 aa13.58□□□□□ -0.23
TPM1-214ENST00000558544 TRGV3P03979 118 aa13.58□□□□□ -0.23
TPM1-214ENST00000558544 HOXB5P09067 269 aa13.58□□□□□ -0.23
TPM1-214ENST00000558544 SULT1A3P0DMM9 295 aa13.58□□□□□ -0.23
TPM1-214ENST00000558544 SULT1A4P0DMN0 295 aa13.58□□□□□ -0.23
TPM1-214ENST00000558544 PSMB6P28072 239 aa13.58□□□□□ -0.23
TPM1-214ENST00000558544 HSPE1P61604 102 aaKnown RBP13.58□□□□□ -0.23
TPM1-214ENST00000558544 PRCDQ00LT1 54 aa13.58□□□□□ -0.23
TPM1-214ENST00000558544 DEFA5Q01523 94 aa13.58□□□□□ -0.23
TPM1-214ENST00000558544 WT1-ASQ06250 92 aa13.58□□□□□ -0.23
TPM1-214ENST00000558544 TATDN3Q17R31 274 aa13.58□□□□□ -0.23
TPM1-214ENST00000558544 C2orf68Q2NKX9 166 aa13.58□□□□□ -0.23
TPM1-214ENST00000558544 KLHL30-AS1Q8NEE0 82 aa13.58□□□□□ -0.23
TPM1-214ENST00000558544 MYOZ3Q8TDC0 251 aa13.58□□□□□ -0.23
TPM1-214ENST00000558544 SRSF8Q9BRL6 282 aaKnown RBP13.58□□□□□ -0.23
TPM1-214ENST00000558544 PDCD10Q9BUL8 212 aa13.58□□□□□ -0.23
TPM1-214ENST00000558544 ZFP57Q9NU63 452 aa13.58□□□□□ -0.23
TPM1-214ENST00000558544 ALG5Q9Y673 324 aa13.58□□□□□ -0.23
TPM1-214ENST00000558544 VWFP04275 2813 aa13.58□□□□□ -0.24
TPM1-214ENST00000558544 NUDT19A8MXV4 375 aa13.58□□□□□ -0.24
TPM1-214ENST00000558544 NXPH3O95157 252 aa13.58□□□□□ -0.24
TPM1-214ENST00000558544 IFNA17P01571 189 aa13.58□□□□□ -0.24
TPM1-214ENST00000558544 OR13C7P0DN81 318 aa13.58□□□□□ -0.24
TPM1-214ENST00000558544 CTRB1P17538 263 aa13.58□□□□□ -0.24
TPM1-214ENST00000558544 CTRB2Q6GPI1 263 aa13.58□□□□□ -0.24
TPM1-214ENST00000558544 ZNF491Q8N8L2 437 aa13.58□□□□□ -0.24
TPM1-214ENST00000558544 SLA2Q9H6Q3 261 aa13.58□□□□□ -0.24
TPM1-214ENST00000558544 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.58□□□□□ -0.24
TPM1-214ENST00000558544 M0QZ24 198 aa13.57□□□□□ -0.24
TPM1-214ENST00000558544 ADAP1O75689 374 aa13.57□□□□□ -0.24
TPM1-214ENST00000558544 TSPAN15O95858 294 aa13.57□□□□□ -0.24
TPM1-214ENST00000558544 CRYGCP07315 174 aa13.57□□□□□ -0.24
TPM1-214ENST00000558544 KIAA0141Q14154 515 aaPredicted RBP13.57□□□□□ -0.24
TPM1-214ENST00000558544 SMCO1Q147U7 214 aa13.57□□□□□ -0.24
TPM1-214ENST00000558544 GGNBP1Q5YKI7 109 aa13.57□□□□□ -0.24
TPM1-214ENST00000558544 HSD17B13Q7Z5P4 300 aaPredicted RBP13.57□□□□□ -0.24
TPM1-214ENST00000558544 ZNF431Q8TF32 576 aaPredicted RBP13.57□□□□□ -0.24
TPM1-214ENST00000558544 MITD1Q8WV92 249 aa13.57□□□□□ -0.24
TPM1-214ENST00000558544 GNB4Q9HAV0 340 aa13.57□□□□□ -0.24
TPM1-214ENST00000558544 PLEKHA3Q9HB20 300 aa13.57□□□□□ -0.24
TPM1-214ENST00000558544 TMED3Q9Y3Q3 217 aa13.57□□□□□ -0.24
TPM1-214ENST00000558544 DEFA4P12838 97 aa13.56□□□□□ -0.24
TPM1-214ENST00000558544 AARDQ4LEZ3 155 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms