RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 A8MWP6 167 aa11.65□□□□□ -0.54
TPM1-211ENST00000558314 CYB5BO43169 146 aa11.65□□□□□ -0.54
TPM1-211ENST00000558314 XRCC3O43542 346 aa11.65□□□□□ -0.54
TPM1-211ENST00000558314 KRASP01116 189 aa11.65□□□□□ -0.54
TPM1-211ENST00000558314 GNRHRP30968 328 aa11.65□□□□□ -0.54
TPM1-211ENST00000558314 LPAR6P43657 344 aa11.65□□□□□ -0.54
TPM1-211ENST00000558314 TAS2R20P59543 309 aa11.65□□□□□ -0.54
TPM1-211ENST00000558314 UBE2NLQ5JXB2 153 aa11.65□□□□□ -0.54
TPM1-211ENST00000558314 OR1L6Q8NGR2 347 aa11.65□□□□□ -0.54
TPM1-211ENST00000558314 CD300LFQ8TDQ1 290 aa11.65□□□□□ -0.54
TPM1-211ENST00000558314 C20orf24Q9BUV8 137 aa11.65□□□□□ -0.54
TPM1-211ENST00000558314 GGTLC1Q9BX51 225 aa11.65□□□□□ -0.54
TPM1-211ENST00000558314 PLEKHA2Q9HB19 425 aa11.65□□□□□ -0.54
TPM1-211ENST00000558314 UFC1Q9Y3C8 167 aa11.65□□□□□ -0.54
TPM1-211ENST00000558314 LOC102724200A0A096LPH7 203 aaPredicted RBP11.64□□□□□ -0.55
TPM1-211ENST00000558314 TEX50A0A1B0GTY4 177 aa11.64□□□□□ -0.55
TPM1-211ENST00000558314 MARCH11A6NNE9 402 aa11.64□□□□□ -0.55
TPM1-211ENST00000558314 ZNF207O43670 478 aaKnown RBP11.64□□□□□ -0.55
TPM1-211ENST00000558314 PGLYRP1O75594 196 aaPredicted RBP11.64□□□□□ -0.55
TPM1-211ENST00000558314 SNAPC5O75971 98 aa11.64□□□□□ -0.55
TPM1-211ENST00000558314 G6PCP35575 357 aa11.64□□□□□ -0.55
TPM1-211ENST00000558314 ANKRD55Q3KP44 614 aa11.64□□□□□ -0.55
TPM1-211ENST00000558314 GDPD1Q8N9F7 314 aa11.64□□□□□ -0.55
TPM1-211ENST00000558314 OR1L8Q8NGR8 309 aa11.64□□□□□ -0.55
TPM1-211ENST00000558314 BORCS5Q969J3 196 aa11.64□□□□□ -0.55
TPM1-211ENST00000558314 COMMD9Q9P000 198 aa11.64□□□□□ -0.55
TPM1-211ENST00000558314 OR51B2Q9Y5P1 312 aa11.64□□□□□ -0.55
TPM1-211ENST00000558314 TGOLN2O43493 480 aa11.63□□□□□ -0.55
TPM1-211ENST00000558314 PTBP1P26599 531 aaKnown RBP eCLIP11.63□□□□□ -0.55
TPM1-211ENST00000558314 HLA-DMAP28067 261 aa11.63□□□□□ -0.55
TPM1-211ENST00000558314 RPS19P39019 145 aaKnown RBP11.63□□□□□ -0.55
TPM1-211ENST00000558314 WT1-ASQ06250 92 aa11.63□□□□□ -0.55
TPM1-211ENST00000558314 POU2AF1Q16633 256 aa11.63□□□□□ -0.55
TPM1-211ENST00000558314 PHLDA2Q53GA4 152 aa11.63□□□□□ -0.55
TPM1-211ENST00000558314 Q56UQ5 140 aa11.63□□□□□ -0.55
TPM1-211ENST00000558314 SLC38A6Q8IZM9 456 aa11.63□□□□□ -0.55
TPM1-211ENST00000558314 MRPL27Q9P0M9 148 aaKnown RBP11.63□□□□□ -0.55
TPM1-211ENST00000558314 SACSQ9NZJ4 4579 aa11.63□□□□□ -0.55
TPM1-211ENST00000558314 SERPINE2P07093 398 aa11.62□□□□□ -0.55
TPM1-211ENST00000558314 F2RP25116 425 aa11.62□□□□□ -0.55
TPM1-211ENST00000558314 PRSS3P35030 304 aa11.62□□□□□ -0.55
TPM1-211ENST00000558314 TAS2R46P59540 309 aa11.62□□□□□ -0.55
TPM1-211ENST00000558314 TSPAN5P62079 268 aa11.62□□□□□ -0.55
TPM1-211ENST00000558314 PMS2P11Q13670 270 aa11.62□□□□□ -0.55
TPM1-211ENST00000558314 KCTD21Q4G0X4 260 aa11.62□□□□□ -0.55
TPM1-211ENST00000558314 CROCCP3Q8IVE0 287 aa11.62□□□□□ -0.55
TPM1-211ENST00000558314 CMTM1Q8IZ96 169 aa11.62□□□□□ -0.55
TPM1-211ENST00000558314 OR6F1Q8NGZ6 308 aa11.62□□□□□ -0.55
TPM1-211ENST00000558314 FCAMRQ8WWV6 532 aa11.62□□□□□ -0.55
TPM1-211ENST00000558314 LSM10Q969L4 123 aaKnown RBP11.62□□□□□ -0.55
TPM1-211ENST00000558314 MARC2Q969Z3 335 aa11.62□□□□□ -0.55
TPM1-211ENST00000558314 MOB3AQ96BX8 217 aa11.62□□□□□ -0.55
TPM1-211ENST00000558314 DGCR14Q96DF8 476 aaKnown RBP11.62□□□□□ -0.55
TPM1-211ENST00000558314 SRSF8Q9BRL6 282 aaKnown RBP11.62□□□□□ -0.55
TPM1-211ENST00000558314 FXYD6Q9H0Q3 95 aa11.62□□□□□ -0.55
TPM1-211ENST00000558314 CSMD3Q7Z407 3707 aa11.61□□□□□ -0.55
TPM1-211ENST00000558314 GPR31O00270 319 aa11.61□□□□□ -0.55
TPM1-211ENST00000558314 HRH1P35367 487 aa11.61□□□□□ -0.55
TPM1-211ENST00000558314 SNX29P2Q8IUI4 249 aa11.61□□□□□ -0.55
TPM1-211ENST00000558314 OR2C3Q8N628 320 aa11.61□□□□□ -0.55
TPM1-211ENST00000558314 VN1R17PQ8TDU5 208 aa11.61□□□□□ -0.55
TPM1-211ENST00000558314 VCX3AQ9NNX9 186 aa11.61□□□□□ -0.55
TPM1-211ENST00000558314 C21orf62Q9NYP8 219 aa11.61□□□□□ -0.55
TPM1-211ENST00000558314 COMMD3Q9UBI1 195 aa11.61□□□□□ -0.55
TPM1-211ENST00000558314 TRAV25A0A0B4J276 109 aa11.6□□□□□ -0.55
TPM1-211ENST00000558314 YIF1AO95070 293 aa11.6□□□□□ -0.55
TPM1-211ENST00000558314 EIF4EP06730 217 aaKnown RBP11.6□□□□□ -0.55
TPM1-211ENST00000558314 MFAP2P55001 183 aa11.6□□□□□ -0.55
TPM1-211ENST00000558314 KLK9Q2XQG4 91 aa11.6□□□□□ -0.55
TPM1-211ENST00000558314 RNASE12Q5GAN4 147 aaKnown RBP11.6□□□□□ -0.55
TPM1-211ENST00000558314 THOC7Q6I9Y2 204 aaKnown RBP11.6□□□□□ -0.55
TPM1-211ENST00000558314 LAMTOR1Q6IAA8 161 aa11.6□□□□□ -0.55
TPM1-211ENST00000558314 DHRS11Q6UWP2 260 aa11.6□□□□□ -0.55
TPM1-211ENST00000558314 HSD17B13Q7Z5P4 300 aaPredicted RBP11.6□□□□□ -0.55
TPM1-211ENST00000558314 TMEM190Q8WZ59 177 aa11.6□□□□□ -0.55
TPM1-211ENST00000558314 MISP3Q96FF7 219 aa11.6□□□□□ -0.55
TPM1-211ENST00000558314 OVOL2Q9BRP0 275 aa11.6□□□□□ -0.55
TPM1-211ENST00000558314 CHRDL1Q9BU40 450 aa11.6□□□□□ -0.55
TPM1-211ENST00000558314 NDUFA4L2Q9NRX3 87 aa11.6□□□□□ -0.55
TPM1-211ENST00000558314 KLK9Q9UKQ9 250 aa11.6□□□□□ -0.55
TPM1-211ENST00000558314 F11RQ9Y624 299 aaKnown RBP11.6□□□□□ -0.55
TPM1-211ENST00000558314 IGKV3-7A0A075B6H7 116 aa11.59□□□□□ -0.55
TPM1-211ENST00000558314 IGHV3-49A0A0A0MS15 119 aa11.59□□□□□ -0.55
TPM1-211ENST00000558314 CXorf65A6NEN9 183 aa11.59□□□□□ -0.55
TPM1-211ENST00000558314 C8orf88P0DMB2 117 aa11.59□□□□□ -0.55
TPM1-211ENST00000558314 RPL35AP18077 110 aaKnown RBP11.59□□□□□ -0.55
TPM1-211ENST00000558314 S100GP29377 79 aa11.59□□□□□ -0.55
TPM1-211ENST00000558314 TFPI2P48307 235 aa11.59□□□□□ -0.55
TPM1-211ENST00000558314 ELLP55199 621 aaPredicted RBP11.59□□□□□ -0.55
TPM1-211ENST00000558314 SCARB1Q8WTV0 552 aa11.59□□□□□ -0.55
TPM1-211ENST00000558314 YIPF6Q96EC8 236 aa11.59□□□□□ -0.55
TPM1-211ENST00000558314 BSCL2Q96G97 398 aaPredicted RBP11.59□□□□□ -0.55
TPM1-211ENST00000558314 TMEM56Q96MV1 263 aa11.59□□□□□ -0.55
TPM1-211ENST00000558314 ZNF436Q9C0F3 470 aaPredicted RBP11.59□□□□□ -0.55
TPM1-211ENST00000558314 DAZ1Q9NQZ3 744 aaKnown RBP11.59□□□□□ -0.55
TPM1-211ENST00000558314 PRNDQ9UKY0 176 aa11.59□□□□□ -0.55
TPM1-211ENST00000558314 SMIM31A0A1B0GVY4 71 aa11.58□□□□□ -0.56
TPM1-211ENST00000558314 DBX1A6NMT0 343 aa11.58□□□□□ -0.56
TPM1-211ENST00000558314 TMEM127O75204 238 aa11.58□□□□□ -0.56
TPM1-211ENST00000558314 IGHV3-48P01763 117 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms