RNA–Protein interactions for RNA: ENST00000558248.5

LRRC28-205, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-205ENST00000558248 CASC10Q5T4H9 136 aa3.02□□□□□ -1.93
LRRC28-205ENST00000558248 LEMD1Q68G75 181 aa3.02□□□□□ -1.93
LRRC28-205ENST00000558248 FAAP20Q6NZ36 180 aa3.02□□□□□ -1.93
LRRC28-205ENST00000558248 TOMM20LQ6UXN7 152 aa3.02□□□□□ -1.93
LRRC28-205ENST00000558248 ZNF497Q6ZNH5 498 aa3.02□□□□□ -1.93
LRRC28-205ENST00000558248 TMEM179BQ7Z7N9 219 aa3.02□□□□□ -1.93
LRRC28-205ENST00000558248 SLC35F6Q8N357 371 aa3.02□□□□□ -1.93
LRRC28-205ENST00000558248 NATD1Q8N6N6 113 aa3.02□□□□□ -1.93
LRRC28-205ENST00000558248 UBL4BQ8N7F7 174 aa3.02□□□□□ -1.93
LRRC28-205ENST00000558248 Q8NBF4 154 aa3.02□□□□□ -1.93
LRRC28-205ENST00000558248 OR11H6Q8NGC7 330 aa3.02□□□□□ -1.93
LRRC28-205ENST00000558248 OR51A2Q8NGJ7 313 aa3.02□□□□□ -1.93
LRRC28-205ENST00000558248 GRPEL2Q8TAA5 225 aa3.02□□□□□ -1.93
LRRC28-205ENST00000558248 DCAKDQ8WVC6 231 aa3.02□□□□□ -1.93
LRRC28-205ENST00000558248 COX14Q96I36 57 aa3.02□□□□□ -1.93
LRRC28-205ENST00000558248 SLC35E1Q96K37 410 aa3.02□□□□□ -1.93
LRRC28-205ENST00000558248 RNF157Q96PX1 679 aa3.02□□□□□ -1.93
LRRC28-205ENST00000558248 OR52B2Q96RD2 323 aa3.02□□□□□ -1.93
LRRC28-205ENST00000558248 PFDN5Q99471 154 aa3.02□□□□□ -1.93
LRRC28-205ENST00000558248 TBX5Q99593 518 aa3.02□□□□□ -1.93
LRRC28-205ENST00000558248 ZNF649Q9BS31 505 aa3.02□□□□□ -1.93
LRRC28-205ENST00000558248 GNB1LQ9BYB4 327 aa3.02□□□□□ -1.93
LRRC28-205ENST00000558248 MAP1LC3BQ9GZQ8 125 aa3.02□□□□□ -1.93
LRRC28-205ENST00000558248 SPNS1Q9H2V7 528 aa3.02□□□□□ -1.93
LRRC28-205ENST00000558248 LRTM1Q9HBL6 345 aa3.02□□□□□ -1.93
LRRC28-205ENST00000558248 SLCO1B3Q9NPD5 702 aa3.02□□□□□ -1.93
LRRC28-205ENST00000558248 CTSZQ9UBR2 303 aa3.02□□□□□ -1.93
LRRC28-205ENST00000558248 SLC23A2Q9UGH3 650 aa3.02□□□□□ -1.93
LRRC28-205ENST00000558248 HDGFL3Q9Y3E1 203 aa3.02□□□□□ -1.93
LRRC28-205ENST00000558248 PRSS21Q9Y6M0 314 aa3.02□□□□□ -1.93
LRRC28-205ENST00000558248 ZNF780BQ9Y6R6 833 aa3.02□□□□□ -1.93
LRRC28-205ENST00000558248 VPS13CQ709C8 3753 aa3.02□□□□□ -1.93
LRRC28-205ENST00000558248 DYSFO75923 2080 aa3.02□□□□□ -1.93
LRRC28-205ENST00000558248 PCM1Q15154 2024 aa3.02□□□□□ -1.93
LRRC28-205ENST00000558248 NUP210LQ5VU65 1888 aa3.01□□□□□ -1.93
LRRC28-205ENST00000558248 A0A0G2JN53 185 aa3.01□□□□□ -1.93
LRRC28-205ENST00000558248 LOC389332A0A1B0GUA5 103 aa3.01□□□□□ -1.93
LRRC28-205ENST00000558248 PLAC8L1A1L4L8 177 aa3.01□□□□□ -1.93
LRRC28-205ENST00000558248 FFAR1O14842 300 aa3.01□□□□□ -1.93
LRRC28-205ENST00000558248 ZNF253O75346 499 aa3.01□□□□□ -1.93
LRRC28-205ENST00000558248 CCNKO75909 580 aa3.01□□□□□ -1.93
LRRC28-205ENST00000558248 KCNK2O95069 426 aa3.01□□□□□ -1.93
LRRC28-205ENST00000558248 GPR75O95800 540 aa3.01□□□□□ -1.93
LRRC28-205ENST00000558248 CRYBA1P05813 215 aa3.01□□□□□ -1.93
LRRC28-205ENST00000558248 PFN1P07737 140 aaKnown RBP3.01□□□□□ -1.93
LRRC28-205ENST00000558248 CDKN2BP42772 138 aa3.01□□□□□ -1.93
LRRC28-205ENST00000558248 KRTAP10-5P60370 271 aa3.01□□□□□ -1.93
LRRC28-205ENST00000558248 GRB2P62993 217 aaKnown RBP3.01□□□□□ -1.93
LRRC28-205ENST00000558248 CXCL6P80162 114 aa3.01□□□□□ -1.93
LRRC28-205ENST00000558248 DCDP81605 110 aaKnown RBP3.01□□□□□ -1.93
LRRC28-205ENST00000558248 FABP5Q01469 135 aa3.01□□□□□ -1.93
LRRC28-205ENST00000558248 DEFA6Q01524 100 aa3.01□□□□□ -1.93
LRRC28-205ENST00000558248 REG3AQ06141 175 aa3.01□□□□□ -1.93
LRRC28-205ENST00000558248 UBE2NLQ5JXB2 153 aa3.01□□□□□ -1.93
LRRC28-205ENST00000558248 TMEM78Q5T7P6 136 aa3.01□□□□□ -1.93
LRRC28-205ENST00000558248 HENMT1Q5T8I9 393 aaKnown RBP3.01□□□□□ -1.93
LRRC28-205ENST00000558248 LPCAT3Q6P1A2 487 aa3.01□□□□□ -1.93
LRRC28-205ENST00000558248 ARL9Q6T311 187 aa3.01□□□□□ -1.93
LRRC28-205ENST00000558248 PLET1Q6UQ28 207 aa3.01□□□□□ -1.93
LRRC28-205ENST00000558248 TMEM205Q6UW68 189 aa3.01□□□□□ -1.93
LRRC28-205ENST00000558248 C5orf46Q6UWT4 87 aa3.01□□□□□ -1.93
LRRC28-205ENST00000558248 SHISA6Q6ZSJ9 500 aa3.01□□□□□ -1.93
LRRC28-205ENST00000558248 RPRMLQ8N4K4 120 aa3.01□□□□□ -1.93
LRRC28-205ENST00000558248 ZNF614Q8N883 585 aa3.01□□□□□ -1.93
LRRC28-205ENST00000558248 MAPK1IP1LQ8NDC0 245 aa3.01□□□□□ -1.93
LRRC28-205ENST00000558248 OR11G2Q8NGC1 345 aa3.01□□□□□ -1.93
LRRC28-205ENST00000558248 OR51H1Q8NH63 302 aa3.01□□□□□ -1.93
LRRC28-205ENST00000558248 ZNRF2Q8NHG8 242 aa3.01□□□□□ -1.93
LRRC28-205ENST00000558248 CD200R1Q8TD46 325 aa3.01□□□□□ -1.93
LRRC28-205ENST00000558248 GNPDA2Q8TDQ7 276 aa3.01□□□□□ -1.93
LRRC28-205ENST00000558248 NEURL3Q96EH8 262 aa3.01□□□□□ -1.93
LRRC28-205ENST00000558248 LINC00479Q96M42 142 aa3.01□□□□□ -1.93
LRRC28-205ENST00000558248 OR4K3Q96R72 315 aa3.01□□□□□ -1.93
LRRC28-205ENST00000558248 ANAPC13Q9BS18 74 aa3.01□□□□□ -1.93
LRRC28-205ENST00000558248 TMEM243Q9BU79 118 aa3.01□□□□□ -1.93
LRRC28-205ENST00000558248 MS4A8Q9BY19 250 aa3.01□□□□□ -1.93
LRRC28-205ENST00000558248 SH3BGRL3Q9H299 93 aa3.01□□□□□ -1.93
LRRC28-205ENST00000558248 FAM96AQ9H5X1 160 aa3.01□□□□□ -1.93
LRRC28-205ENST00000558248 DHCR7Q9UBM7 475 aaKnown RBP3.01□□□□□ -1.93
LRRC28-205ENST00000558248 HRNRQ86YZ3 2850 aaPredicted RBP3.01□□□□□ -1.93
LRRC28-205ENST00000558248 ABCA1O95477 2261 aa3□□□□□ -1.93
LRRC28-205ENST00000558248 IGLV7-46A0A075B6I9 117 aa3□□□□□ -1.93
LRRC28-205ENST00000558248 A0A1W2PPR1 153 aa3□□□□□ -1.93
LRRC28-205ENST00000558248 WI2-2373I1.2A0A1W2PRP0 233 aa3□□□□□ -1.93
LRRC28-205ENST00000558248 GMNCA6NCL1 334 aa3□□□□□ -1.93
LRRC28-205ENST00000558248 ZNF705GA8MUZ8 300 aaPredicted RBP3□□□□□ -1.93
LRRC28-205ENST00000558248 E7EQ34 232 aa3□□□□□ -1.93
LRRC28-205ENST00000558248 DNASE2O00115 360 aaPredicted RBP3□□□□□ -1.93
LRRC28-205ENST00000558248 TCF21O43680 179 aa3□□□□□ -1.93
LRRC28-205ENST00000558248 GCM2O75603 506 aaPredicted RBP3□□□□□ -1.93
LRRC28-205ENST00000558248 SULT1C4O75897 302 aa3□□□□□ -1.93
LRRC28-205ENST00000558248 DUS4LO95620 317 aaKnown RBP3□□□□□ -1.93
LRRC28-205ENST00000558248 HLA-DPB1P04440 258 aa3□□□□□ -1.93
LRRC28-205ENST00000558248 GZMHP20718 246 aa3□□□□□ -1.93
LRRC28-205ENST00000558248 GADD45AP24522 165 aa3□□□□□ -1.93
LRRC28-205ENST00000558248 ERP29P30040 261 aaKnown RBP3□□□□□ -1.93
LRRC28-205ENST00000558248 PHBP35232 272 aa3□□□□□ -1.93
LRRC28-205ENST00000558248 AKR1C3P42330 323 aa3□□□□□ -1.93
LRRC28-205ENST00000558248 TPI1P60174 286 aa3□□□□□ -1.93
LRRC28-205ENST00000558248 RPL23P62829 140 aaKnown RBP3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms