RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 TSPAN5P62079 268 aa7.68□□□□□ -1.18
USP3-207ENST00000558218 CTF1Q16619 201 aa7.68□□□□□ -1.18
USP3-207ENST00000558218 FAM106AQ4KMX7 169 aa7.68□□□□□ -1.18
USP3-207ENST00000558218 GTSCR1Q86UQ5 136 aa7.68□□□□□ -1.18
USP3-207ENST00000558218 KRTAP19-1Q8IUB9 90 aa7.68□□□□□ -1.18
USP3-207ENST00000558218 OR1L6Q8NGR2 347 aa7.68□□□□□ -1.18
USP3-207ENST00000558218 OR1L8Q8NGR8 309 aa7.68□□□□□ -1.18
USP3-207ENST00000558218 OR51H1Q8NH63 302 aa7.68□□□□□ -1.18
USP3-207ENST00000558218 TSC22D3Q99576 134 aa7.68□□□□□ -1.18
USP3-207ENST00000558218 ASCL2Q99929 193 aa7.68□□□□□ -1.18
USP3-207ENST00000558218 THAP7Q9BT49 309 aaPredicted RBP7.68□□□□□ -1.18
USP3-207ENST00000558218 QTRT1Q9BXR0 403 aaKnown RBP7.68□□□□□ -1.18
USP3-207ENST00000558218 TMEM140Q9NV12 185 aa7.68□□□□□ -1.18
USP3-207ENST00000558218 IGLC7A0M8Q6 106 aa7.67□□□□□ -1.18
USP3-207ENST00000558218 CGB1A6NKQ9 187 aa7.67□□□□□ -1.18
USP3-207ENST00000558218 MARCH11A6NNE9 402 aa7.67□□□□□ -1.18
USP3-207ENST00000558218 SNAPC5O75971 98 aa7.67□□□□□ -1.18
USP3-207ENST00000558218 S1PR2O95136 353 aa7.67□□□□□ -1.18
USP3-207ENST00000558218 GABARAPO95166 117 aa7.67□□□□□ -1.18
USP3-207ENST00000558218 NDUFB8O95169 186 aa7.67□□□□□ -1.18
USP3-207ENST00000558218 TRAPPC2P0DI81 140 aa7.67□□□□□ -1.18
USP3-207ENST00000558218 TRAPPC2BP0DI82 140 aa7.67□□□□□ -1.18
USP3-207ENST00000558218 IGHV4-30-4P0DP06 118 aa7.67□□□□□ -1.18
USP3-207ENST00000558218 ELK1P19419 428 aa7.67□□□□□ -1.18
USP3-207ENST00000558218 TBPP20226 339 aa7.67□□□□□ -1.18
USP3-207ENST00000558218 PTBP1P26599 531 aaKnown RBP eCLIP7.67□□□□□ -1.18
USP3-207ENST00000558218 HLA-DMAP28067 261 aa7.67□□□□□ -1.18
USP3-207ENST00000558218 LPAR6P43657 344 aa7.67□□□□□ -1.18
USP3-207ENST00000558218 ZNF585BQ52M93 769 aa7.67□□□□□ -1.18
USP3-207ENST00000558218 SLC38A6Q8IZM9 456 aa7.67□□□□□ -1.18
USP3-207ENST00000558218 OR5B3Q8NH48 314 aa7.67□□□□□ -1.18
USP3-207ENST00000558218 VN1R17PQ8TDU5 208 aa7.67□□□□□ -1.18
USP3-207ENST00000558218 FCAMRQ8WWV6 532 aa7.67□□□□□ -1.18
USP3-207ENST00000558218 TM2D3Q9BRN9 247 aa7.67□□□□□ -1.18
USP3-207ENST00000558218 PRNDQ9UKY0 176 aa7.67□□□□□ -1.18
USP3-207ENST00000558218 TRAV3A0A0B4J244 114 aa7.66□□□□□ -1.18
USP3-207ENST00000558218 TEX50A0A1B0GTY4 177 aa7.66□□□□□ -1.18
USP3-207ENST00000558218 HPGDSO60760 199 aa7.66□□□□□ -1.18
USP3-207ENST00000558218 OR2C1O95371 312 aa7.66□□□□□ -1.18
USP3-207ENST00000558218 KRASP01116 189 aa7.66□□□□□ -1.18
USP3-207ENST00000558218 RLN1P04808 185 aa7.66□□□□□ -1.18
USP3-207ENST00000558218 CLEC3BP05452 202 aa7.66□□□□□ -1.18
USP3-207ENST00000558218 SERPINE2P07093 398 aa7.66□□□□□ -1.18
USP3-207ENST00000558218 RPA2P15927 270 aa7.66□□□□□ -1.18
USP3-207ENST00000558218 CBLN1P23435 193 aa7.66□□□□□ -1.18
USP3-207ENST00000558218 ARL3P36405 182 aa7.66□□□□□ -1.18
USP3-207ENST00000558218 ELLP55199 621 aaPredicted RBP7.66□□□□□ -1.18
USP3-207ENST00000558218 DEFA5Q01523 94 aa7.66□□□□□ -1.18
USP3-207ENST00000558218 DEFB114Q30KQ6 69 aa7.66□□□□□ -1.18
USP3-207ENST00000558218 CLEC19AQ6UXS0 136 aa7.66□□□□□ -1.18
USP3-207ENST00000558218 ARRDC1Q8N5I2 433 aa7.66□□□□□ -1.18
USP3-207ENST00000558218 LSM10Q969L4 123 aaKnown RBP7.66□□□□□ -1.18
USP3-207ENST00000558218 MARC2Q969Z3 335 aa7.66□□□□□ -1.18
USP3-207ENST00000558218 ZNF486Q96H40 463 aaPredicted RBP7.66□□□□□ -1.18
USP3-207ENST00000558218 CCDC140Q96MF4 163 aa7.66□□□□□ -1.18
USP3-207ENST00000558218 TMEM56Q96MV1 263 aa7.66□□□□□ -1.18
USP3-207ENST00000558218 RCHY1Q96PM5 261 aa7.66□□□□□ -1.18
USP3-207ENST00000558218 PALMDQ9NP74 551 aa7.66□□□□□ -1.18
USP3-207ENST00000558218 NDUFA4L2Q9NRX3 87 aa7.66□□□□□ -1.18
USP3-207ENST00000558218 RABL2AQ9UBK7 228 aaPredicted RBP7.66□□□□□ -1.18
USP3-207ENST00000558218 RABL2BQ9UNT1 228 aa7.66□□□□□ -1.18
USP3-207ENST00000558218 TENM3Q9P273 2699 aa7.66□□□□□ -1.18
USP3-207ENST00000558218 C2orf70A6NJV1 201 aa7.65□□□□□ -1.18
USP3-207ENST00000558218 ZNF785A8K8V0 405 aa7.65□□□□□ -1.18
USP3-207ENST00000558218 A8MWP6 167 aa7.65□□□□□ -1.18
USP3-207ENST00000558218 PPP5D1E7EU14 171 aa7.65□□□□□ -1.18
USP3-207ENST00000558218 IFNA6P05013 189 aa7.65□□□□□ -1.18
USP3-207ENST00000558218 OR13C7P0DN81 318 aa7.65□□□□□ -1.18
USP3-207ENST00000558218 FOLR2P14207 255 aa7.65□□□□□ -1.18
USP3-207ENST00000558218 SSBP1Q04837 148 aaKnown RBP7.65□□□□□ -1.18
USP3-207ENST00000558218 GPR107Q5VW38 600 aa7.65□□□□□ -1.18
USP3-207ENST00000558218 ADAMTSL5Q6ZMM2 481 aa7.65□□□□□ -1.18
USP3-207ENST00000558218 SNX29P2Q8IUI4 249 aa7.65□□□□□ -1.18
USP3-207ENST00000558218 GDPD1Q8N9F7 314 aa7.65□□□□□ -1.18
USP3-207ENST00000558218 ZNF502Q8TBZ5 544 aa7.65□□□□□ -1.18
USP3-207ENST00000558218 DYNLRB2Q8TF09 96 aa7.65□□□□□ -1.18
USP3-207ENST00000558218 MRPS26Q9BYN8 205 aaKnown RBP7.65□□□□□ -1.18
USP3-207ENST00000558218 ZC4H2Q9NQZ6 224 aa7.65□□□□□ -1.18
USP3-207ENST00000558218 GAR1Q9NY12 217 aaKnown RBP7.65□□□□□ -1.18
USP3-207ENST00000558218 SLC2A8Q9NY64 477 aa7.65□□□□□ -1.18
USP3-207ENST00000558218 MTFP1Q9UDX5 166 aa7.65□□□□□ -1.18
USP3-207ENST00000558218 TRAV25A0A0B4J276 109 aa7.64□□□□□ -1.19
USP3-207ENST00000558218 FAM25AB3EWG3 89 aa7.64□□□□□ -1.19
USP3-207ENST00000558218 FAM25CB3EWG5 89 aa7.64□□□□□ -1.19
USP3-207ENST00000558218 FAM25GB3EWG6 89 aa7.64□□□□□ -1.19
USP3-207ENST00000558218 B3GALNT1O75752 331 aa7.64□□□□□ -1.19
USP3-207ENST00000558218 ATG12O94817 140 aa7.64□□□□□ -1.19
USP3-207ENST00000558218 SMIM18P0DKX4 95 aa7.64□□□□□ -1.19
USP3-207ENST00000558218 C8orf88P0DMB2 117 aa7.64□□□□□ -1.19
USP3-207ENST00000558218 MYOD1P15172 320 aa7.64□□□□□ -1.19
USP3-207ENST00000558218 G6PCP35575 357 aa7.64□□□□□ -1.19
USP3-207ENST00000558218 ALDH3B2P48448 385 aa7.64□□□□□ -1.19
USP3-207ENST00000558218 RND3P61587 244 aa7.64□□□□□ -1.19
USP3-207ENST00000558218 MRPS10P82664 201 aaKnown RBP7.64□□□□□ -1.19
USP3-207ENST00000558218 WT1-ASQ06250 92 aa7.64□□□□□ -1.19
USP3-207ENST00000558218 ANKRD55Q3KP44 614 aa7.64□□□□□ -1.19
USP3-207ENST00000558218 CD300EQ496F6 205 aaPredicted RBP7.64□□□□□ -1.19
USP3-207ENST00000558218 SPSB3Q6PJ21 355 aa7.64□□□□□ -1.19
USP3-207ENST00000558218 PLET1Q6UQ28 207 aa7.64□□□□□ -1.19
USP3-207ENST00000558218 LINC00322Q6ZN03 302 aaPredicted RBP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms