RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 SPSB3Q6PJ21 355 aa3.77□□□□□ -1.81
SPG11-208ENST00000558155 C19orf35Q6ZS72 473 aa3.77□□□□□ -1.81
SPG11-208ENST00000558155 SSX9Q7RTT3 188 aa3.77□□□□□ -1.81
SPG11-208ENST00000558155 AKAP14Q86UN6 197 aa3.77□□□□□ -1.81
SPG11-208ENST00000558155 CBR4Q8N4T8 237 aa3.77□□□□□ -1.81
SPG11-208ENST00000558155 MS4A15Q8N5U1 240 aa3.77□□□□□ -1.81
SPG11-208ENST00000558155 MAPKAPK5-AS1Q8N8E1 139 aa3.77□□□□□ -1.81
SPG11-208ENST00000558155 ZNF555Q8NEP9 628 aa3.77□□□□□ -1.81
SPG11-208ENST00000558155 OR56B1Q8NGI3 324 aa3.77□□□□□ -1.81
SPG11-208ENST00000558155 TMEM167AQ8TBQ9 72 aa3.77□□□□□ -1.81
SPG11-208ENST00000558155 ZNF502Q8TBZ5 544 aa3.77□□□□□ -1.81
SPG11-208ENST00000558155 VN1R17PQ8TDU5 208 aa3.77□□□□□ -1.81
SPG11-208ENST00000558155 APH1BQ8WW43 257 aa3.77□□□□□ -1.81
SPG11-208ENST00000558155 TMEM190Q8WZ59 177 aa3.77□□□□□ -1.81
SPG11-208ENST00000558155 PHYHIPQ92561 330 aa3.77□□□□□ -1.81
SPG11-208ENST00000558155 ARHGAP5-AS1Q96IT6 56 aa3.77□□□□□ -1.81
SPG11-208ENST00000558155 NDUFAF3Q9BU61 184 aa3.77□□□□□ -1.81
SPG11-208ENST00000558155 C20orf24Q9BUV8 137 aa3.77□□□□□ -1.81
SPG11-208ENST00000558155 PECRQ9BY49 303 aa3.77□□□□□ -1.81
SPG11-208ENST00000558155 LPAR5Q9H1C0 372 aa3.77□□□□□ -1.81
SPG11-208ENST00000558155 EXTL2Q9UBQ6 330 aa3.77□□□□□ -1.81
SPG11-208ENST00000558155 SMPXQ9UHP9 88 aa3.77□□□□□ -1.81
SPG11-208ENST00000558155 DIMT1Q9UNQ2 313 aaKnown RBP3.77□□□□□ -1.81
SPG11-208ENST00000558155 ETV7Q9Y603 341 aa3.77□□□□□ -1.81
SPG11-208ENST00000558155 DNAH10Q8IVF4 4471 aa3.76□□□□□ -1.81
SPG11-208ENST00000558155 DEFB131BA0A096LNP1 70 aa3.76□□□□□ -1.81
SPG11-208ENST00000558155 C15orf61A6NNL5 157 aa3.76□□□□□ -1.81
SPG11-208ENST00000558155 C15orf62A8K5M9 175 aa3.76□□□□□ -1.81
SPG11-208ENST00000558155 C16orf90A8MZG2 172 aa3.76□□□□□ -1.81
SPG11-208ENST00000558155 E7EUB6 86 aa3.76□□□□□ -1.81
SPG11-208ENST00000558155 WBP4O75554 376 aaKnown RBP3.76□□□□□ -1.81
SPG11-208ENST00000558155 CIB2O75838 187 aa3.76□□□□□ -1.81
SPG11-208ENST00000558155 DFFBO76075 338 aa3.76□□□□□ -1.81
SPG11-208ENST00000558155 KBTBD11O94819 623 aa3.76□□□□□ -1.81
SPG11-208ENST00000558155 HRASP01112 189 aa3.76□□□□□ -1.81
SPG11-208ENST00000558155 REG1AP05451 166 aa3.76□□□□□ -1.81
SPG11-208ENST00000558155 CD5P06127 495 aa3.76□□□□□ -1.81
SPG11-208ENST00000558155 RBMY1A1P0DJD3 496 aaKnown RBP3.76□□□□□ -1.81
SPG11-208ENST00000558155 RBMY1CP0DJD4 496 aa3.76□□□□□ -1.81
SPG11-208ENST00000558155 CD37P11049 281 aa3.76□□□□□ -1.81
SPG11-208ENST00000558155 MIFP14174 115 aa3.76□□□□□ -1.81
SPG11-208ENST00000558155 AREGP15514 252 aa3.76□□□□□ -1.81
SPG11-208ENST00000558155 HLA-GP17693 338 aa3.76□□□□□ -1.81
SPG11-208ENST00000558155 TALDO1P37837 337 aa3.76□□□□□ -1.81
SPG11-208ENST00000558155 TFPI2P48307 235 aa3.76□□□□□ -1.81
SPG11-208ENST00000558155 RPL8P62917 257 aaKnown RBP3.76□□□□□ -1.81
SPG11-208ENST00000558155 RBMY1FQ15415 496 aaKnown RBP3.76□□□□□ -1.81
SPG11-208ENST00000558155 SMN1Q16637 294 aaKnown RBP3.76□□□□□ -1.81
SPG11-208ENST00000558155 RBM48Q5RL73 367 aaKnown RBP3.76□□□□□ -1.81
SPG11-208ENST00000558155 C1orf134Q5TEV5 83 aa3.76□□□□□ -1.81
SPG11-208ENST00000558155 SLC25A24Q6NUK1 477 aa3.76□□□□□ -1.81
SPG11-208ENST00000558155 Q6ZTC4 211 aa3.76□□□□□ -1.81
SPG11-208ENST00000558155 KCTD9Q7L273 389 aa3.76□□□□□ -1.81
SPG11-208ENST00000558155 LRRTM1Q86UE6 522 aa3.76□□□□□ -1.81
SPG11-208ENST00000558155 UBE2DNLQ8IWF7 75 aa3.76□□□□□ -1.81
SPG11-208ENST00000558155 STHQ8IWL8 128 aa3.76□□□□□ -1.81
SPG11-208ENST00000558155 H1FOOQ8IZA3 346 aaPredicted RBP3.76□□□□□ -1.81
SPG11-208ENST00000558155 VKORC1L1Q8N0U8 176 aa3.76□□□□□ -1.81
SPG11-208ENST00000558155 PUSL1Q8N0Z8 303 aaKnown RBP3.76□□□□□ -1.81
SPG11-208ENST00000558155 Q8N1X5 172 aa3.76□□□□□ -1.81
SPG11-208ENST00000558155 Q8NAQ8 132 aa3.76□□□□□ -1.81
SPG11-208ENST00000558155 TMEM116Q8NCL8 245 aa3.76□□□□□ -1.81
SPG11-208ENST00000558155 OR4S2Q8NH73 311 aa3.76□□□□□ -1.81
SPG11-208ENST00000558155 BSCL2Q96G97 398 aaPredicted RBP3.76□□□□□ -1.81
SPG11-208ENST00000558155 C5orf30Q96GV9 206 aa3.76□□□□□ -1.81
SPG11-208ENST00000558155 ATP6V0BQ99437 205 aa3.76□□□□□ -1.81
SPG11-208ENST00000558155 RNF2Q99496 336 aa3.76□□□□□ -1.81
SPG11-208ENST00000558155 SRSF8Q9BRL6 282 aaKnown RBP3.76□□□□□ -1.81
SPG11-208ENST00000558155 CABLES2Q9BTV7 478 aa3.76□□□□□ -1.81
SPG11-208ENST00000558155 C9orf16Q9BUW7 83 aa3.76□□□□□ -1.81
SPG11-208ENST00000558155 RHPN1-AS1Q9BWJ2 59 aa3.76□□□□□ -1.81
SPG11-208ENST00000558155 PLGRKTQ9HBL7 147 aa3.76□□□□□ -1.81
SPG11-208ENST00000558155 NDUFA13Q9P0J0 144 aa3.76□□□□□ -1.81
SPG11-208ENST00000558155 RYR1P21817 5038 aa3.75□□□□□ -1.81
SPG11-208ENST00000558155 IGKV3-7A0A075B6H7 116 aa3.75□□□□□ -1.81
SPG11-208ENST00000558155 IGLV2-18A0A075B6J9 118 aa3.75□□□□□ -1.81
SPG11-208ENST00000558155 IGHV4-28A0A0C4DH34 117 aa3.75□□□□□ -1.81
SPG11-208ENST00000558155 IGHV7-4-1A0A0J9YVY3 117 aa3.75□□□□□ -1.81
SPG11-208ENST00000558155 A0A1B0GW64 132 aa3.75□□□□□ -1.81
SPG11-208ENST00000558155 EFCAB10A6NFE3 127 aa3.75□□□□□ -1.81
SPG11-208ENST00000558155 OR2T8A6NH00 312 aa3.75□□□□□ -1.81
SPG11-208ENST00000558155 DBX1A6NMT0 343 aa3.75□□□□□ -1.81
SPG11-208ENST00000558155 FOXI3A8MTJ6 420 aaPredicted RBP3.75□□□□□ -1.81
SPG11-208ENST00000558155 J3QRK9 145 aa3.75□□□□□ -1.81
SPG11-208ENST00000558155 DNASE2O00115 360 aaPredicted RBP3.75□□□□□ -1.81
SPG11-208ENST00000558155 RAB27BO00194 218 aa3.75□□□□□ -1.81
SPG11-208ENST00000558155 CHEK1O14757 476 aa3.75□□□□□ -1.81
SPG11-208ENST00000558155 DENRO43583 198 aaKnown RBP3.75□□□□□ -1.81
SPG11-208ENST00000558155 ZNF207O43670 478 aaKnown RBP3.75□□□□□ -1.81
SPG11-208ENST00000558155 ATP5HO75947 161 aa3.75□□□□□ -1.81
SPG11-208ENST00000558155 AMBPP02760 352 aa3.75□□□□□ -1.81
SPG11-208ENST00000558155 FCGR3AP08637 254 aa3.75□□□□□ -1.81
SPG11-208ENST00000558155 CTXN2P0C2S0 81 aa3.75□□□□□ -1.81
SPG11-208ENST00000558155 CD36P16671 472 aa3.75□□□□□ -1.81
SPG11-208ENST00000558155 M6PRP20645 277 aa3.75□□□□□ -1.81
SPG11-208ENST00000558155 RAB14P61106 215 aa3.75□□□□□ -1.81
SPG11-208ENST00000558155 ST3GAL4Q11206 333 aa3.75□□□□□ -1.81
SPG11-208ENST00000558155 PLA2G7Q13093 441 aa3.75□□□□□ -1.81
SPG11-208ENST00000558155 P2RY14Q15391 338 aa3.75□□□□□ -1.81
SPG11-208ENST00000558155 C12orf74Q32Q52 190 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms