RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 ARV1Q9H2C2 271 aa16.34■□□□□ 0.21
SNRPA1-205ENST00000558036 SLC25A32Q9H2D1 315 aa16.34■□□□□ 0.21
SNRPA1-205ENST00000558036 NDUFA4L2Q9NRX3 87 aa16.34■□□□□ 0.21
SNRPA1-205ENST00000558036 CACFD1Q9UGQ2 172 aa16.34■□□□□ 0.21
SNRPA1-205ENST00000558036 CGB1A6NKQ9 187 aa16.33■□□□□ 0.21
SNRPA1-205ENST00000558036 TEX46H3BTG2 121 aa16.33■□□□□ 0.21
SNRPA1-205ENST00000558036 MOSP00540 346 aa16.33■□□□□ 0.21
SNRPA1-205ENST00000558036 AVPP01185 164 aa16.33■□□□□ 0.21
SNRPA1-205ENST00000558036 GNB1P62873 340 aa16.33■□□□□ 0.21
SNRPA1-205ENST00000558036 PRSS8Q16651 343 aa16.33■□□□□ 0.21
SNRPA1-205ENST00000558036 CXorf58Q96LI9 332 aa16.33■□□□□ 0.21
SNRPA1-205ENST00000558036 FCN1O00602 326 aa16.33■□□□□ 0.2
SNRPA1-205ENST00000558036 PLGLAQ15195 96 aa16.33■□□□□ 0.2
SNRPA1-205ENST00000558036 TNXAQ16473 311 aa16.33■□□□□ 0.2
SNRPA1-205ENST00000558036 FAM120AOSQ5T036 256 aa16.33■□□□□ 0.2
SNRPA1-205ENST00000558036 PPP1R27Q86WC6 154 aa16.33■□□□□ 0.2
SNRPA1-205ENST00000558036 LINC01356Q8N9X3 169 aa16.33■□□□□ 0.2
SNRPA1-205ENST00000558036 OR1L8Q8NGR8 309 aa16.33■□□□□ 0.2
SNRPA1-205ENST00000558036 MBD6Q96DN6 1003 aa16.33■□□□□ 0.2
SNRPA1-205ENST00000558036 GINS3Q9BRX5 216 aa16.33■□□□□ 0.2
SNRPA1-205ENST00000558036 SOX21Q9Y651 276 aaPredicted RBP16.33■□□□□ 0.2
SNRPA1-205ENST00000558036 IGHV1-69DA0A0B4J2H0 117 aa16.32■□□□□ 0.2
SNRPA1-205ENST00000558036 OOSP1A8MZH6 123 aa16.32■□□□□ 0.2
SNRPA1-205ENST00000558036 IGHV1-69P01742 117 aa16.32■□□□□ 0.2
SNRPA1-205ENST00000558036 OR8U8P0C7N1 319 aa16.32■□□□□ 0.2
SNRPA1-205ENST00000558036 APELAP0DMC3 54 aa16.32■□□□□ 0.2
SNRPA1-205ENST00000558036 STPG2Q8N412 459 aa16.32■□□□□ 0.2
SNRPA1-205ENST00000558036 CCDC168Q8NDH2 2452 aa16.32■□□□□ 0.2
SNRPA1-205ENST00000558036 SLC24A4Q8NFF2 622 aa16.32■□□□□ 0.2
SNRPA1-205ENST00000558036 OR10P1Q8NGE3 313 aa16.32■□□□□ 0.2
SNRPA1-205ENST00000558036 UBE2L5PA0A1B0GUS4 154 aa16.31■□□□□ 0.2
SNRPA1-205ENST00000558036 CA2P00918 260 aa16.31■□□□□ 0.2
SNRPA1-205ENST00000558036 ATP6V0CP27449 155 aa16.31■□□□□ 0.2
SNRPA1-205ENST00000558036 LOXL1Q08397 574 aaPredicted RBP16.31■□□□□ 0.2
SNRPA1-205ENST00000558036 NDUFA5Q16718 116 aa16.31■□□□□ 0.2
SNRPA1-205ENST00000558036 TRAV20A0A0B4J274 112 aa16.31■□□□□ 0.2
SNRPA1-205ENST00000558036 PLXNB1O43157 2135 aa16.31■□□□□ 0.2
SNRPA1-205ENST00000558036 DFFBO76075 338 aa16.31■□□□□ 0.2
SNRPA1-205ENST00000558036 TGFAP01135 160 aa16.31■□□□□ 0.2
SNRPA1-205ENST00000558036 SLC25A24Q6NUK1 477 aa16.31■□□□□ 0.2
SNRPA1-205ENST00000558036 C1orf159Q96HA4 380 aa16.31■□□□□ 0.2
SNRPA1-205ENST00000558036 NBR2O15453 112 aa16.3■□□□□ 0.2
SNRPA1-205ENST00000558036 ACTL6BO94805 426 aa16.3■□□□□ 0.2
SNRPA1-205ENST00000558036 IFNA4P05014 189 aa16.3■□□□□ 0.2
SNRPA1-205ENST00000558036 SPP1P10451 314 aa16.3■□□□□ 0.2
SNRPA1-205ENST00000558036 NPY1RP25929 384 aa16.3■□□□□ 0.2
SNRPA1-205ENST00000558036 ETV3LQ6ZN32 361 aa16.3■□□□□ 0.2
SNRPA1-205ENST00000558036 MMD2Q8IY49 270 aa16.3■□□□□ 0.2
SNRPA1-205ENST00000558036 OR2T10Q8NGZ9 312 aa16.3■□□□□ 0.2
SNRPA1-205ENST00000558036 RNF5Q99942 180 aa16.3■□□□□ 0.2
SNRPA1-205ENST00000558036 FAM157CP0CG43 387 aa16.3■□□□□ 0.2
SNRPA1-205ENST00000558036 RPP30P78346 268 aaKnown RBP16.3■□□□□ 0.2
SNRPA1-205ENST00000558036 SSBP2P81877 361 aaPredicted RBP16.3■□□□□ 0.2
SNRPA1-205ENST00000558036 WT1-ASQ06250 92 aa16.3■□□□□ 0.2
SNRPA1-205ENST00000558036 AKAP9Q99996 3911 aa16.3■□□□□ 0.2
SNRPA1-205ENST00000558036 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.29■□□□□ 0.22e-8■■■■■ 37.6
SNRPA1-205ENST00000558036 IFNA5P01569 189 aa16.29■□□□□ 0.2
SNRPA1-205ENST00000558036 REG1AP05451 166 aa16.29■□□□□ 0.2
SNRPA1-205ENST00000558036 EIF5AL1Q6IS14 154 aaKnown RBP16.29■□□□□ 0.2
SNRPA1-205ENST00000558036 ITGB1BP2Q9UKP3 347 aa16.29■□□□□ 0.2
SNRPA1-205ENST00000558036 A0A0U1RQK1 487 aa16.28■□□□□ 0.2
SNRPA1-205ENST00000558036 NCBP2LA6PVI3 153 aaKnown RBP16.28■□□□□ 0.2
SNRPA1-205ENST00000558036 TMEM249Q2WGJ8 235 aa16.28■□□□□ 0.2
SNRPA1-205ENST00000558036 KLF17Q5JT82 389 aaPredicted RBP16.28■□□□□ 0.2
SNRPA1-205ENST00000558036 WFDC11Q8NEX6 87 aa16.28■□□□□ 0.2
SNRPA1-205ENST00000558036 PINX1Q96BK5 328 aaKnown RBP16.28■□□□□ 0.2
SNRPA1-205ENST00000558036 RSG1Q9BU20 258 aa16.28■□□□□ 0.2
SNRPA1-205ENST00000558036 ITPR3Q14573 2671 aa16.28■□□□□ 0.2
SNRPA1-205ENST00000558036 LY86O95711 162 aa16.28■□□□□ 0.2
SNRPA1-205ENST00000558036 TMEM11P17152 192 aa16.28■□□□□ 0.2
SNRPA1-205ENST00000558036 COMPP49747 757 aaPredicted RBP16.28■□□□□ 0.2
SNRPA1-205ENST00000558036 TUSC1Q2TAM9 212 aa16.28■□□□□ 0.2
SNRPA1-205ENST00000558036 RNF141Q8WVD5 230 aa16.28■□□□□ 0.2
SNRPA1-205ENST00000558036 KIAA1456Q9P272 454 aa16.28■□□□□ 0.2
SNRPA1-205ENST00000558036 CREBBPQ92793 2442 aa16.28■□□□□ 0.2
SNRPA1-205ENST00000558036 PRRC2AP48634 2157 aaKnown RBP16.27■□□□□ 0.2
SNRPA1-205ENST00000558036 TEX15Q9BXT5 2789 aa16.27■□□□□ 0.2
SNRPA1-205ENST00000558036 PRSS46E5RG02 174 aa16.27■□□□□ 0.2
SNRPA1-205ENST00000558036 SEC11BP0C7V7 166 aa16.27■□□□□ 0.2
SNRPA1-205ENST00000558036 OR13C7P0DN81 318 aa16.27■□□□□ 0.2
SNRPA1-205ENST00000558036 IGHV4-31P0DP07 118 aa16.27■□□□□ 0.2
SNRPA1-205ENST00000558036 SNCAP37840 140 aa16.27■□□□□ 0.2
SNRPA1-205ENST00000558036 FHITP49789 147 aa16.27■□□□□ 0.2
SNRPA1-205ENST00000558036 TMEM182Q6ZP80 229 aaPredicted RBP16.27■□□□□ 0.2
SNRPA1-205ENST00000558036 C19orf35Q6ZS72 473 aa16.27■□□□□ 0.2
SNRPA1-205ENST00000558036 Q8N6K4 173 aa16.27■□□□□ 0.2
SNRPA1-205ENST00000558036 NPBQ8NG41 125 aa16.27■□□□□ 0.2
SNRPA1-205ENST00000558036 OR2G3Q8NGZ4 309 aa16.27■□□□□ 0.2
SNRPA1-205ENST00000558036 UQCC1Q9NVA1 299 aa16.27■□□□□ 0.2
SNRPA1-205ENST00000558036 ZNF705EA8MWA4 302 aaPredicted RBP16.27■□□□□ 0.19
SNRPA1-205ENST00000558036 NDUFA3O95167 84 aa16.27■□□□□ 0.19
SNRPA1-205ENST00000558036 RPL27AP46776 148 aaKnown RBP16.27■□□□□ 0.19
SNRPA1-205ENST00000558036 RAB11AP62491 216 aa16.27■□□□□ 0.19
SNRPA1-205ENST00000558036 PRSS57Q6UWY2 283 aa16.27■□□□□ 0.19
SNRPA1-205ENST00000558036 SCGB1C1Q8TD33 95 aa16.27■□□□□ 0.19
SNRPA1-205ENST00000558036 TMEM147Q9BVK8 224 aa16.27■□□□□ 0.19
SNRPA1-205ENST00000558036 LINC00862A6NCI5 91 aa16.26■□□□□ 0.19
SNRPA1-205ENST00000558036 RNASE2P10153 161 aaKnown RBP16.26■□□□□ 0.19
SNRPA1-205ENST00000558036 AREGP15514 252 aa16.26■□□□□ 0.19
SNRPA1-205ENST00000558036 GATA3P23771 443 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms