RNA–Protein interactions for RNA: ENST00000557845.1

NEDD4-212, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-212ENST00000557845 SERPINE2P07093 398 aa12.67□□□□□ -0.38
NEDD4-212ENST00000557845 IGHV4-30-4P0DP06 118 aa12.67□□□□□ -0.38
NEDD4-212ENST00000557845 WT1-ASQ06250 92 aa12.67□□□□□ -0.38
NEDD4-212ENST00000557845 HSD17B13Q7Z5P4 300 aaPredicted RBP12.67□□□□□ -0.38
NEDD4-212ENST00000557845 OR2K2Q8NGT1 345 aa12.67□□□□□ -0.38
NEDD4-212ENST00000557845 C15orf40Q8WUR7 153 aa12.67□□□□□ -0.38
NEDD4-212ENST00000557845 THAP7Q9BT49 309 aaPredicted RBP12.67□□□□□ -0.38
NEDD4-212ENST00000557845 MIXL1Q9H2W2 232 aa12.67□□□□□ -0.38
NEDD4-212ENST00000557845 THYN1Q9P016 225 aa12.67□□□□□ -0.38
NEDD4-212ENST00000557845 OR51B2Q9Y5P1 312 aa12.67□□□□□ -0.38
NEDD4-212ENST00000557845 CTDSP2O14595 271 aa12.66□□□□□ -0.38
NEDD4-212ENST00000557845 RGS5O15539 181 aa12.66□□□□□ -0.38
NEDD4-212ENST00000557845 OR13C7P0DN81 318 aa12.66□□□□□ -0.38
NEDD4-212ENST00000557845 PTBP1P26599 531 aaKnown RBP eCLIP12.66□□□□□ -0.38
NEDD4-212ENST00000557845 RNASE10Q5GAN6 216 aaKnown RBP12.66□□□□□ -0.38
NEDD4-212ENST00000557845 SLC25A24Q6NUK1 477 aa12.66□□□□□ -0.38
NEDD4-212ENST00000557845 LHFPL1Q86WI0 220 aa12.66□□□□□ -0.38
NEDD4-212ENST00000557845 CLVS1Q8IUQ0 354 aaPredicted RBP12.66□□□□□ -0.38
NEDD4-212ENST00000557845 SGPP2Q8IWX5 399 aa12.66□□□□□ -0.38
NEDD4-212ENST00000557845 C19orf73Q9NVV2 129 aa12.66□□□□□ -0.38
NEDD4-212ENST00000557845 FKBP11Q9NYL4 201 aa12.66□□□□□ -0.38
NEDD4-212ENST00000557845 HUWE1Q7Z6Z7 4374 aaKnown RBP12.65□□□□□ -0.38
NEDD4-212ENST00000557845 C2orf70A6NJV1 201 aa12.65□□□□□ -0.38
NEDD4-212ENST00000557845 CYB5BO43169 146 aa12.65□□□□□ -0.38
NEDD4-212ENST00000557845 IGKV1-39P01597 117 aa12.65□□□□□ -0.38
NEDD4-212ENST00000557845 IGKV1D-39P04432 117 aa12.65□□□□□ -0.38
NEDD4-212ENST00000557845 FOLR2P14207 255 aa12.65□□□□□ -0.38
NEDD4-212ENST00000557845 EDN2P20800 178 aa12.65□□□□□ -0.38
NEDD4-212ENST00000557845 DEFB114Q30KQ6 69 aa12.65□□□□□ -0.38
NEDD4-212ENST00000557845 CD300EQ496F6 205 aaPredicted RBP12.65□□□□□ -0.38
NEDD4-212ENST00000557845 FAM106AQ4KMX7 169 aa12.65□□□□□ -0.38
NEDD4-212ENST00000557845 ARRDC1Q8N5I2 433 aa12.65□□□□□ -0.38
NEDD4-212ENST00000557845 GDPD1Q8N9F7 314 aa12.65□□□□□ -0.38
NEDD4-212ENST00000557845 TMEM229BQ8NBD8 167 aa12.65□□□□□ -0.38
NEDD4-212ENST00000557845 ZNF502Q8TBZ5 544 aa12.65□□□□□ -0.38
NEDD4-212ENST00000557845 RAB2BQ8WUD1 216 aa12.65□□□□□ -0.38
NEDD4-212ENST00000557845 LSM10Q969L4 123 aaKnown RBP12.65□□□□□ -0.38
NEDD4-212ENST00000557845 SEC22AQ96IW7 307 aa12.65□□□□□ -0.38
NEDD4-212ENST00000557845 TSC22D3Q99576 134 aa12.65□□□□□ -0.38
NEDD4-212ENST00000557845 HINT2Q9BX68 163 aa12.65□□□□□ -0.38
NEDD4-212ENST00000557845 PRNDQ9UKY0 176 aa12.65□□□□□ -0.38
NEDD4-212ENST00000557845 ZNF320A2RRD8 509 aa12.64□□□□□ -0.39
NEDD4-212ENST00000557845 DBX1A6NMT0 343 aa12.64□□□□□ -0.39
NEDD4-212ENST00000557845 PGAM2P15259 253 aa12.64□□□□□ -0.39
NEDD4-212ENST00000557845 TBPP20226 339 aa12.64□□□□□ -0.39
NEDD4-212ENST00000557845 CBLN1P23435 193 aa12.64□□□□□ -0.39
NEDD4-212ENST00000557845 TMBIM6P55061 237 aa12.64□□□□□ -0.39
NEDD4-212ENST00000557845 RND3P61587 244 aa12.64□□□□□ -0.39
NEDD4-212ENST00000557845 H2BFWTQ7Z2G1 175 aa12.64□□□□□ -0.39
NEDD4-212ENST00000557845 GTSCR1Q86UQ5 136 aa12.64□□□□□ -0.39
NEDD4-212ENST00000557845 LAX1Q8IWV1 398 aa12.64□□□□□ -0.39
NEDD4-212ENST00000557845 OR5B3Q8NH48 314 aa12.64□□□□□ -0.39
NEDD4-212ENST00000557845 VN1R17PQ8TDU5 208 aa12.64□□□□□ -0.39
NEDD4-212ENST00000557845 DYNLRB2Q8TF09 96 aa12.64□□□□□ -0.39
NEDD4-212ENST00000557845 ZNF486Q96H40 463 aaPredicted RBP12.64□□□□□ -0.39
NEDD4-212ENST00000557845 TMEM56Q96MV1 263 aa12.64□□□□□ -0.39
NEDD4-212ENST00000557845 ZC4H2Q9NQZ6 224 aa12.64□□□□□ -0.39
NEDD4-212ENST00000557845 TMEM14BQ9NUH8 114 aa12.64□□□□□ -0.39
NEDD4-212ENST00000557845 C15orf61A6NNL5 157 aa12.63□□□□□ -0.39
NEDD4-212ENST00000557845 ZNF785A8K8V0 405 aa12.63□□□□□ -0.39
NEDD4-212ENST00000557845 GABARAPH6UMI1 98 aa12.63□□□□□ -0.39
NEDD4-212ENST00000557845 CD74P04233 296 aa12.63□□□□□ -0.39
NEDD4-212ENST00000557845 PI3P19957 117 aa12.63□□□□□ -0.39
NEDD4-212ENST00000557845 TAS2R19P59542 299 aa12.63□□□□□ -0.39
NEDD4-212ENST00000557845 OR4D10Q8NGI6 311 aa12.63□□□□□ -0.39
NEDD4-212ENST00000557845 TERB2Q8NHR7 220 aa12.63□□□□□ -0.39
NEDD4-212ENST00000557845 DYNC2LI1Q8TCX1 351 aa12.63□□□□□ -0.39
NEDD4-212ENST00000557845 RCHY1Q96PM5 261 aa12.63□□□□□ -0.39
NEDD4-212ENST00000557845 ZMAT4Q9H898 229 aa12.63□□□□□ -0.39
NEDD4-212ENST00000557845 TECRQ9NZ01 308 aaKnown RBP12.63□□□□□ -0.39
NEDD4-212ENST00000557845 F11RQ9Y624 299 aaKnown RBP12.63□□□□□ -0.39
NEDD4-212ENST00000557845 GPR183P32249 361 aa12.62□□□□□ -0.39
NEDD4-212ENST00000557845 MFAP2P55001 183 aa12.62□□□□□ -0.39
NEDD4-212ENST00000557845 PIGPP57054 158 aa12.62□□□□□ -0.39
NEDD4-212ENST00000557845 STEAP1BQ6NZ63 245 aa12.62□□□□□ -0.39
NEDD4-212ENST00000557845 PLET1Q6UQ28 207 aa12.62□□□□□ -0.39
NEDD4-212ENST00000557845 OR4A16Q8NH70 328 aa12.62□□□□□ -0.39
NEDD4-212ENST00000557845 MRGPRFQ96AM1 343 aa12.62□□□□□ -0.39
NEDD4-212ENST00000557845 BCL7BQ9BQE9 202 aa12.62□□□□□ -0.39
NEDD4-212ENST00000557845 TMEM213A2RRL7 107 aa12.61□□□□□ -0.39
NEDD4-212ENST00000557845 A8MWP6 167 aa12.61□□□□□ -0.39
NEDD4-212ENST00000557845 RAB3DO95716 219 aa12.61□□□□□ -0.39
NEDD4-212ENST00000557845 RPL5P46777 297 aaKnown RBP12.61□□□□□ -0.39
NEDD4-212ENST00000557845 MRPS10P82664 201 aaKnown RBP12.61□□□□□ -0.39
NEDD4-212ENST00000557845 SSBP1Q04837 148 aaKnown RBP12.61□□□□□ -0.39
NEDD4-212ENST00000557845 OR1L6Q8NGR2 347 aa12.61□□□□□ -0.39
NEDD4-212ENST00000557845 ZFAND1Q8TCF1 268 aa12.61□□□□□ -0.39
NEDD4-212ENST00000557845 CACNG8Q8WXS5 425 aa12.61□□□□□ -0.39
NEDD4-212ENST00000557845 DIRAS2Q96HU8 199 aa12.61□□□□□ -0.39
NEDD4-212ENST00000557845 PPP5CP53041 499 aa12.6□□□□□ -0.39
NEDD4-212ENST00000557845 SCGB2B2Q4G0G5 96 aa12.6□□□□□ -0.39
NEDD4-212ENST00000557845 TM4SF20Q53R12 229 aa12.6□□□□□ -0.39
NEDD4-212ENST00000557845 UNQ9165/PRO28630Q6UXU0 137 aa12.6□□□□□ -0.39
NEDD4-212ENST00000557845 UXS1Q8NBZ7 420 aa12.6□□□□□ -0.39
NEDD4-212ENST00000557845 SCARB1Q8WTV0 552 aa12.6□□□□□ -0.39
NEDD4-212ENST00000557845 TP53RKQ96S44 253 aa12.6□□□□□ -0.39
NEDD4-212ENST00000557845 TM2D3Q9BRN9 247 aa12.6□□□□□ -0.39
NEDD4-212ENST00000557845 TUBA4BQ9H853 241 aa12.6□□□□□ -0.39
NEDD4-212ENST00000557845 PALMDQ9NP74 551 aa12.6□□□□□ -0.39
NEDD4-212ENST00000557845 CCDC59Q9P031 241 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms