RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 ZNF429Q86V71 674 aa11.97□□□□□ -0.49
NEDD1-213ENST00000557644 OR5AU1Q8NGC0 362 aa11.97□□□□□ -0.49
NEDD1-213ENST00000557644 OR1L8Q8NGR8 309 aa11.97□□□□□ -0.49
NEDD1-213ENST00000557644 FKBP11Q9NYL4 201 aa11.97□□□□□ -0.49
NEDD1-213ENST00000557644 REG1AP05451 166 aa11.97□□□□□ -0.49
NEDD1-213ENST00000557644 SULT1A3P0DMM9 295 aa11.97□□□□□ -0.49
NEDD1-213ENST00000557644 SULT1A4P0DMN0 295 aa11.97□□□□□ -0.49
NEDD1-213ENST00000557644 TMEM267Q0VDI3 215 aaPredicted RBP11.97□□□□□ -0.49
NEDD1-213ENST00000557644 C2orf68Q2NKX9 166 aa11.97□□□□□ -0.49
NEDD1-213ENST00000557644 MINDY2Q8NBR6 621 aa11.97□□□□□ -0.49
NEDD1-213ENST00000557644 OR5B3Q8NH48 314 aa11.97□□□□□ -0.49
NEDD1-213ENST00000557644 GPN1Q9HCN4 374 aaPredicted RBP11.97□□□□□ -0.49
NEDD1-213ENST00000557644 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.97□□□□□ -0.49
NEDD1-213ENST00000557644 ZNF580Q9UK33 172 aa11.97□□□□□ -0.49
NEDD1-213ENST00000557644 TRAPPC2P0DI81 140 aa11.96□□□□□ -0.49
NEDD1-213ENST00000557644 TRAPPC2BP0DI82 140 aa11.96□□□□□ -0.49
NEDD1-213ENST00000557644 SMCO1Q147U7 214 aa11.96□□□□□ -0.49
NEDD1-213ENST00000557644 TCTEX1D4Q5JR98 221 aa11.96□□□□□ -0.49
NEDD1-213ENST00000557644 IGLC7A0M8Q6 106 aa11.96□□□□□ -0.5
NEDD1-213ENST00000557644 SNRPGP15A8MWD9 76 aa11.96□□□□□ -0.5
NEDD1-213ENST00000557644 IFNA17P01571 189 aa11.96□□□□□ -0.5
NEDD1-213ENST00000557644 CD28P10747 220 aa11.96□□□□□ -0.5
NEDD1-213ENST00000557644 HSPE1P61604 102 aaKnown RBP11.96□□□□□ -0.5
NEDD1-213ENST00000557644 GON7Q9BXV9 100 aa11.96□□□□□ -0.5
NEDD1-213ENST00000557644 ZNF257Q9Y2Q1 563 aa11.96□□□□□ -0.5
NEDD1-213ENST00000557644 ALG5Q9Y673 324 aa11.96□□□□□ -0.5
NEDD1-213ENST00000557644 PIGBOS1A0A0B4J2F0 54 aa11.95□□□□□ -0.5
NEDD1-213ENST00000557644 A0A1B0GU03 582 aa11.95□□□□□ -0.5
NEDD1-213ENST00000557644 SLC35B1P78383 322 aa11.95□□□□□ -0.5
NEDD1-213ENST00000557644 WT1-ASQ06250 92 aa11.95□□□□□ -0.5
NEDD1-213ENST00000557644 AARDQ4LEZ3 155 aa11.95□□□□□ -0.5
NEDD1-213ENST00000557644 OR10C1Q96KK4 312 aa11.95□□□□□ -0.5
NEDD1-213ENST00000557644 KLK15Q9H2R5 256 aa11.95□□□□□ -0.5
NEDD1-213ENST00000557644 PITX3O75364 302 aa11.94□□□□□ -0.5
NEDD1-213ENST00000557644 IFNA21P01568 189 aa11.94□□□□□ -0.5
NEDD1-213ENST00000557644 IGHG4P01861 327 aa11.94□□□□□ -0.5
NEDD1-213ENST00000557644 PRH1P02810 166 aa11.94□□□□□ -0.5
NEDD1-213ENST00000557644 PRCDQ00LT1 54 aa11.94□□□□□ -0.5
NEDD1-213ENST00000557644 C11orf87Q6NUJ2 197 aa11.94□□□□□ -0.5
NEDD1-213ENST00000557644 C12orf54Q6X4T0 127 aa11.94□□□□□ -0.5
NEDD1-213ENST00000557644 OR1S1Q8NH92 325 aa11.94□□□□□ -0.5
NEDD1-213ENST00000557644 COA4Q9NYJ1 87 aa11.94□□□□□ -0.5
NEDD1-213ENST00000557644 C7orf66A4D0T2 115 aa11.94□□□□□ -0.5
NEDD1-213ENST00000557644 IGLV1-40P01703 118 aa11.94□□□□□ -0.5
NEDD1-213ENST00000557644 TEX38Q6PEX7 206 aa11.94□□□□□ -0.5
NEDD1-213ENST00000557644 MS4A10Q96PG2 267 aa11.94□□□□□ -0.5
NEDD1-213ENST00000557644 PDCD10Q9BUL8 212 aa11.94□□□□□ -0.5
NEDD1-213ENST00000557644 C13orf42A0A1B0GVH6 325 aa11.93□□□□□ -0.5
NEDD1-213ENST00000557644 FAM25EA8MYX2 175 aa11.93□□□□□ -0.5
NEDD1-213ENST00000557644 OR13C7P0DN81 318 aa11.93□□□□□ -0.5
NEDD1-213ENST00000557644 PSMB8P28062 276 aa11.93□□□□□ -0.5
NEDD1-213ENST00000557644 DEFA5Q01523 94 aa11.93□□□□□ -0.5
NEDD1-213ENST00000557644 CXorf66Q5JRM2 361 aaPredicted RBP11.93□□□□□ -0.5
NEDD1-213ENST00000557644 THOC7Q6I9Y2 204 aaKnown RBP11.93□□□□□ -0.5
NEDD1-213ENST00000557644 ZNF355PQ9NSJ1 428 aa11.93□□□□□ -0.5
NEDD1-213ENST00000557644 PF4V1P10720 104 aa11.93□□□□□ -0.5
NEDD1-213ENST00000557644 SLC25A6P12236 298 aa11.93□□□□□ -0.5
NEDD1-213ENST00000557644 PSMB6P28072 239 aa11.93□□□□□ -0.5
NEDD1-213ENST00000557644 IAH1Q2TAA2 248 aaPredicted RBP11.93□□□□□ -0.5
NEDD1-213ENST00000557644 KRTAP21-3Q3LHN1 58 aa11.93□□□□□ -0.5
NEDD1-213ENST00000557644 TTC9CQ8N5M4 171 aa11.93□□□□□ -0.5
NEDD1-213ENST00000557644 C3orf56Q8N813 242 aa11.93□□□□□ -0.5
NEDD1-213ENST00000557644 FAM110DQ8TAY7 271 aaPredicted RBP11.93□□□□□ -0.5
NEDD1-213ENST00000557644 TMEM68Q96MH6 324 aa11.93□□□□□ -0.5
NEDD1-213ENST00000557644 ANK2Q01484 3957 aa11.93□□□□□ -0.5
NEDD1-213ENST00000557644 SSNA1O43805 119 aa11.92□□□□□ -0.5
NEDD1-213ENST00000557644 FBXO24O75426 580 aa11.92□□□□□ -0.5
NEDD1-213ENST00000557644 RPLP1P05386 114 aaKnown RBP11.92□□□□□ -0.5
NEDD1-213ENST00000557644 CTRB1P17538 263 aa11.92□□□□□ -0.5
NEDD1-213ENST00000557644 SPCS3P61009 180 aa11.92□□□□□ -0.5
NEDD1-213ENST00000557644 TNFRSF9Q07011 255 aa11.92□□□□□ -0.5
NEDD1-213ENST00000557644 CTRB2Q6GPI1 263 aa11.92□□□□□ -0.5
NEDD1-213ENST00000557644 OR4X2Q8NGF9 303 aa11.92□□□□□ -0.5
NEDD1-213ENST00000557644 OR52E5Q8NH55 327 aa11.92□□□□□ -0.5
NEDD1-213ENST00000557644 CITED2Q99967 270 aaPredicted RBP11.92□□□□□ -0.5
NEDD1-213ENST00000557644 PLEKHA3Q9HB20 300 aa11.92□□□□□ -0.5
NEDD1-213ENST00000557644 HSPB7Q9UBY9 170 aa11.92□□□□□ -0.5
NEDD1-213ENST00000557644 SIX6O95475 246 aa11.92□□□□□ -0.5
NEDD1-213ENST00000557644 FOXE3Q13461 319 aa11.92□□□□□ -0.5
NEDD1-213ENST00000557644 OR5M8Q8NGP6 311 aa11.92□□□□□ -0.5
NEDD1-213ENST00000557644 GSKIPQ9P0R6 139 aa11.92□□□□□ -0.5
NEDD1-213ENST00000557644 C5orf51A6NDU8 294 aa11.91□□□□□ -0.5
NEDD1-213ENST00000557644 NPIPB5A8MRT5 1133 aa11.91□□□□□ -0.5
NEDD1-213ENST00000557644 GOSR2O14653 212 aa11.91□□□□□ -0.5
NEDD1-213ENST00000557644 CRYGCP07315 174 aa11.91□□□□□ -0.5
NEDD1-213ENST00000557644 HOXA1P49639 335 aaPredicted RBP11.91□□□□□ -0.5
NEDD1-213ENST00000557644 RAB9AP51151 201 aa11.91□□□□□ -0.5
NEDD1-213ENST00000557644 PDLIM3Q53GG5 364 aaPredicted RBP11.91□□□□□ -0.5
NEDD1-213ENST00000557644 CITED1Q99966 193 aa11.91□□□□□ -0.5
NEDD1-213ENST00000557644 SRSF8Q9BRL6 282 aaKnown RBP11.91□□□□□ -0.5
NEDD1-213ENST00000557644 MAGT1Q9H0U3 335 aa11.91□□□□□ -0.5
NEDD1-213ENST00000557644 DMRT1Q9Y5R6 373 aa11.91□□□□□ -0.5
NEDD1-213ENST00000557644 TRRAPQ9Y4A5 3859 aa11.91□□□□□ -0.5
NEDD1-213ENST00000557644 CD83Q01151 205 aa11.91□□□□□ -0.5
NEDD1-213ENST00000557644 KHDC1LQ5JSQ8 128 aa11.91□□□□□ -0.5
NEDD1-213ENST00000557644 OR4D5Q8NGN0 318 aa11.91□□□□□ -0.5
NEDD1-213ENST00000557644 ZNF747Q9BV97 191 aa11.91□□□□□ -0.5
NEDD1-213ENST00000557644 RBKSQ9H477 322 aa11.91□□□□□ -0.5
NEDD1-213ENST00000557644 CEBPZOSA8MTT3 80 aa11.9□□□□□ -0.5
NEDD1-213ENST00000557644 ELANEP08246 267 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms