RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 C1QTNF9P0C862 333 aa12.63□□□□□ -0.39
TMEM55B-207ENST00000557041 ERVFC1-1P60608 527 aa12.63□□□□□ -0.39
TMEM55B-207ENST00000557041 SUMO1P63165 101 aaKnown RBP12.63□□□□□ -0.39
TMEM55B-207ENST00000557041 BLNKQ8WV28 456 aa12.63□□□□□ -0.39
TMEM55B-207ENST00000557041 SLC35E1Q96K37 410 aa12.63□□□□□ -0.39
TMEM55B-207ENST00000557041 SCO2A0A1W2PP80 73 aa12.63□□□□□ -0.39
TMEM55B-207ENST00000557041 XKRY2A2RUG3 117 aa12.63□□□□□ -0.39
TMEM55B-207ENST00000557041 C5orf52A6NGY3 159 aa12.63□□□□□ -0.39
TMEM55B-207ENST00000557041 C17orf100A8MU93 164 aa12.63□□□□□ -0.39
TMEM55B-207ENST00000557041 KBTBD11O94819 623 aa12.63□□□□□ -0.39
TMEM55B-207ENST00000557041 RPL23P62829 140 aaKnown RBP12.63□□□□□ -0.39
TMEM55B-207ENST00000557041 USF2Q15853 346 aaPredicted RBP12.63□□□□□ -0.39
TMEM55B-207ENST00000557041 SPACA3Q8IXA5 215 aa12.63□□□□□ -0.39
TMEM55B-207ENST00000557041 OR2T10Q8NGZ9 312 aa12.63□□□□□ -0.39
TMEM55B-207ENST00000557041 MBD3L1Q8WWY6 194 aa12.63□□□□□ -0.39
TMEM55B-207ENST00000557041 SEPSECSQ9HD40 501 aaKnown RBP12.63□□□□□ -0.39
TMEM55B-207ENST00000557041 COA4Q9NYJ1 87 aa12.63□□□□□ -0.39
TMEM55B-207ENST00000557041 HIST1H2BKO60814 126 aa12.62□□□□□ -0.39
TMEM55B-207ENST00000557041 HIST1H2BJP06899 126 aa12.62□□□□□ -0.39
TMEM55B-207ENST00000557041 HIST1H2BOP23527 126 aa12.62□□□□□ -0.39
TMEM55B-207ENST00000557041 HIST1H2BBP33778 126 aa12.62□□□□□ -0.39
TMEM55B-207ENST00000557041 HIST1H2BDP58876 126 aa12.62□□□□□ -0.39
TMEM55B-207ENST00000557041 HIST1H2BCP62807 126 aa12.62□□□□□ -0.39
TMEM55B-207ENST00000557041 HIST2H2BEQ16778 126 aa12.62□□□□□ -0.39
TMEM55B-207ENST00000557041 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.62□□□□□ -0.39
TMEM55B-207ENST00000557041 IGFL2Q6UWQ7 119 aa12.62□□□□□ -0.39
TMEM55B-207ENST00000557041 TGIF2LXQ8IUE1 241 aa12.62□□□□□ -0.39
TMEM55B-207ENST00000557041 PRSS33Q8NF86 280 aa12.62□□□□□ -0.39
TMEM55B-207ENST00000557041 SGMS2Q8NHU3 365 aa12.62□□□□□ -0.39
TMEM55B-207ENST00000557041 HIST1H2BHQ93079 126 aa12.62□□□□□ -0.39
TMEM55B-207ENST00000557041 HIST1H2BNQ99877 126 aa12.62□□□□□ -0.39
TMEM55B-207ENST00000557041 HIST1H2BMQ99879 126 aa12.62□□□□□ -0.39
TMEM55B-207ENST00000557041 ONECUT1Q9UBC0 465 aa12.62□□□□□ -0.39
TMEM55B-207ENST00000557041 FOXH1O75593 365 aa12.62□□□□□ -0.39
TMEM55B-207ENST00000557041 CNIH1O95406 144 aa12.62□□□□□ -0.39
TMEM55B-207ENST00000557041 AGAP20933 346 aa12.62□□□□□ -0.39
TMEM55B-207ENST00000557041 RHOBP62745 196 aa12.62□□□□□ -0.39
TMEM55B-207ENST00000557041 ASCL5Q7RTU5 278 aa12.62□□□□□ -0.39
TMEM55B-207ENST00000557041 MANBALQ9NQG1 85 aa12.62□□□□□ -0.39
TMEM55B-207ENST00000557041 SIRT7Q9NRC8 400 aa12.62□□□□□ -0.39
TMEM55B-207ENST00000557041 SSUH2Q9Y2M2 353 aa12.62□□□□□ -0.39
TMEM55B-207ENST00000557041 CENPEQ02224 2701 aa12.62□□□□□ -0.39
TMEM55B-207ENST00000557041 DIAPH2-AS1Q14236 149 aa12.61□□□□□ -0.39
TMEM55B-207ENST00000557041 TUBG2Q9NRH3 451 aa12.61□□□□□ -0.39
TMEM55B-207ENST00000557041 IL6RP08887 468 aaPredicted RBP12.61□□□□□ -0.39
TMEM55B-207ENST00000557041 CD24P25063 80 aa12.61□□□□□ -0.39
TMEM55B-207ENST00000557041 RELBQ01201 579 aa12.61□□□□□ -0.39
TMEM55B-207ENST00000557041 ADIPOQQ15848 244 aa12.61□□□□□ -0.39
TMEM55B-207ENST00000557041 TNXAQ16473 311 aa12.61□□□□□ -0.39
TMEM55B-207ENST00000557041 C1orf229Q6ZS94 237 aaPredicted RBP12.61□□□□□ -0.39
TMEM55B-207ENST00000557041 OR9G1Q8NH87 305 aa12.61□□□□□ -0.39
TMEM55B-207ENST00000557041 IGFBPL1Q8WX77 278 aa12.61□□□□□ -0.39
TMEM55B-207ENST00000557041 SLC17A3O00476 420 aa12.61□□□□□ -0.39
TMEM55B-207ENST00000557041 CCL21O00585 134 aa12.61□□□□□ -0.39
TMEM55B-207ENST00000557041 GFRA3O60609 400 aa12.61□□□□□ -0.39
TMEM55B-207ENST00000557041 SAA1P0DJI8 122 aaPredicted RBP12.61□□□□□ -0.39
TMEM55B-207ENST00000557041 TIMP3P35625 211 aa12.61□□□□□ -0.39
TMEM55B-207ENST00000557041 ASPHD1Q5U4P2 390 aa12.61□□□□□ -0.39
TMEM55B-207ENST00000557041 MIR17HGQ75NE6 70 aa12.61□□□□□ -0.39
TMEM55B-207ENST00000557041 OR2T6Q8NHC8 308 aa12.61□□□□□ -0.39
TMEM55B-207ENST00000557041 Q8TCH9 128 aa12.61□□□□□ -0.39
TMEM55B-207ENST00000557041 GAFA1Q96PS6 74 aa12.61□□□□□ -0.39
TMEM55B-207ENST00000557041 TUBA4BQ9H853 241 aa12.61□□□□□ -0.39
TMEM55B-207ENST00000557041 C17orf58Q2M2W7 97 aa12.6□□□□□ -0.39
TMEM55B-207ENST00000557041 PRR31Q5SQ13 230 aa12.6□□□□□ -0.39
TMEM55B-207ENST00000557041 WDR83OSQ9Y284 106 aa12.6□□□□□ -0.39
TMEM55B-207ENST00000557041 PPIHO43447 177 aaKnown RBP12.6□□□□□ -0.39
TMEM55B-207ENST00000557041 CD3EP07766 207 aa12.6□□□□□ -0.39
TMEM55B-207ENST00000557041 LOXL3P58215 753 aa12.6□□□□□ -0.39
TMEM55B-207ENST00000557041 MGST2Q99735 147 aa12.6□□□□□ -0.39
TMEM55B-207ENST00000557041 TMEM106BQ9NUM4 274 aa12.6□□□□□ -0.39
TMEM55B-207ENST00000557041 MYO18BQ8IUG5 2567 aa12.6□□□□□ -0.39
TMEM55B-207ENST00000557041 LINC00587B1AMM8 73 aa12.6□□□□□ -0.39
TMEM55B-207ENST00000557041 B4DEV8 164 aa12.6□□□□□ -0.39
TMEM55B-207ENST00000557041 OR5I1Q13606 314 aa12.6□□□□□ -0.39
TMEM55B-207ENST00000557041 FXYD3Q14802 87 aa12.6□□□□□ -0.39
TMEM55B-207ENST00000557041 COX7A2P2O60397 106 aa12.59□□□□□ -0.39
TMEM55B-207ENST00000557041 CRYBB3P26998 211 aa12.59□□□□□ -0.39
TMEM55B-207ENST00000557041 GUSBP1Q15486 140 aa12.59□□□□□ -0.39
TMEM55B-207ENST00000557041 TCTEX1D1Q8N7M0 179 aa12.59□□□□□ -0.39
TMEM55B-207ENST00000557041 P2RX4Q99571 388 aa12.59□□□□□ -0.39
TMEM55B-207ENST00000557041 GGTLC1Q9BX51 225 aa12.59□□□□□ -0.39
TMEM55B-207ENST00000557041 PRNDQ9UKY0 176 aa12.59□□□□□ -0.39
TMEM55B-207ENST00000557041 TRAPPC1Q9Y5R8 145 aa12.59□□□□□ -0.39
TMEM55B-207ENST00000557041 ZNF705FA8MVS1 300 aaPredicted RBP12.59□□□□□ -0.39
TMEM55B-207ENST00000557041 SCGB1D1O95968 90 aa12.59□□□□□ -0.39
TMEM55B-207ENST00000557041 ZNF705DP0CH99 300 aaPredicted RBP12.59□□□□□ -0.39
TMEM55B-207ENST00000557041 ZNF705BP0CI00 300 aaPredicted RBP12.59□□□□□ -0.39
TMEM55B-207ENST00000557041 ADTRPQ96IZ2 230 aa12.59□□□□□ -0.39
TMEM55B-207ENST00000557041 HILPDAQ9Y5L2 63 aa12.59□□□□□ -0.39
TMEM55B-207ENST00000557041 USP9YO00507 2555 aaPredicted RBP12.59□□□□□ -0.39
TMEM55B-207ENST00000557041 SRRM4A7MD48 611 aaKnown RBP12.58□□□□□ -0.39
TMEM55B-207ENST00000557041 KIR2DS2P43631 304 aa12.58□□□□□ -0.39
TMEM55B-207ENST00000557041 RPL8P62917 257 aaKnown RBP12.58□□□□□ -0.39
TMEM55B-207ENST00000557041 PMS2P11Q13670 270 aa12.58□□□□□ -0.39
TMEM55B-207ENST00000557041 CYP2G1PQ6ZSU1 146 aa12.58□□□□□ -0.39
TMEM55B-207ENST00000557041 C1orf174Q8IYL3 243 aa12.58□□□□□ -0.39
TMEM55B-207ENST00000557041 NPIPB3Q92617 1050 aa12.58□□□□□ -0.39
TMEM55B-207ENST00000557041 GGACTQ9BVM4 153 aa12.58□□□□□ -0.39
TMEM55B-207ENST00000557041 METTL1Q9UBP6 276 aaKnown RBP12.58□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms