RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 MPDU1O75352 247 aa8.2□□□□□ -1.1
TMEM260-211ENST00000556648 RNASE2P10153 161 aaKnown RBP8.2□□□□□ -1.1
TMEM260-211ENST00000556648 NPPCP23582 126 aa8.2□□□□□ -1.1
TMEM260-211ENST00000556648 PMS2P11Q13670 270 aa8.2□□□□□ -1.1
TMEM260-211ENST00000556648 RBMS3Q6XE24 437 aaKnown RBP8.2□□□□□ -1.1
TMEM260-211ENST00000556648 OSR1Q8TAX0 266 aaPredicted RBP8.2□□□□□ -1.1
TMEM260-211ENST00000556648 TMEM204Q9BSN7 226 aa8.2□□□□□ -1.1
TMEM260-211ENST00000556648 TMEM133Q9H2Q1 129 aa8.2□□□□□ -1.1
TMEM260-211ENST00000556648 SDF2L1Q9HCN8 221 aa8.2□□□□□ -1.1
TMEM260-211ENST00000556648 RELNP78509 3460 aa8.2□□□□□ -1.1
TMEM260-211ENST00000556648 TNCP24821 2201 aa8.19□□□□□ -1.1
TMEM260-211ENST00000556648 ATRXP46100 2492 aa8.19□□□□□ -1.1
TMEM260-211ENST00000556648 A0A087WWC5 75 aa8.19□□□□□ -1.1
TMEM260-211ENST00000556648 A0A087X0M5 115 aa8.19□□□□□ -1.1
TMEM260-211ENST00000556648 A0A1B0GX30 115 aa8.19□□□□□ -1.1
TMEM260-211ENST00000556648 NDUFA2O43678 99 aa8.19□□□□□ -1.1
TMEM260-211ENST00000556648 ARL14EPLP0DKL9 152 aa8.19□□□□□ -1.1
TMEM260-211ENST00000556648 AGAP20933 346 aa8.19□□□□□ -1.1
TMEM260-211ENST00000556648 ATP5G3P48201 142 aa8.19□□□□□ -1.1
TMEM260-211ENST00000556648 B2MP61769 119 aa8.19□□□□□ -1.1
TMEM260-211ENST00000556648 KIAA0141Q14154 515 aaPredicted RBP8.19□□□□□ -1.1
TMEM260-211ENST00000556648 RNF212Q495C1 297 aa8.19□□□□□ -1.1
TMEM260-211ENST00000556648 STPG3Q8N7X2 389 aa8.19□□□□□ -1.1
TMEM260-211ENST00000556648 OR9G1Q8NH87 305 aa8.19□□□□□ -1.1
TMEM260-211ENST00000556648 IGFBPL1Q8WX77 278 aa8.19□□□□□ -1.1
TMEM260-211ENST00000556648 FLYWCH2Q96CP2 140 aaKnown RBP8.19□□□□□ -1.1
TMEM260-211ENST00000556648 SMIM7Q9BQ49 75 aa8.19□□□□□ -1.1
TMEM260-211ENST00000556648 PARLQ9H300 379 aa8.19□□□□□ -1.1
TMEM260-211ENST00000556648 NPVFQ9HCQ7 196 aa8.19□□□□□ -1.1
TMEM260-211ENST00000556648 MANBALQ9NQG1 85 aa8.19□□□□□ -1.1
TMEM260-211ENST00000556648 ZZEF1O43149 2961 aa8.19□□□□□ -1.1
TMEM260-211ENST00000556648 IGKV1OR2-108A0A075B7D4 117 aa8.19□□□□□ -1.1
TMEM260-211ENST00000556648 SOX15O60248 233 aa8.19□□□□□ -1.1
TMEM260-211ENST00000556648 TSPAN9O75954 239 aa8.19□□□□□ -1.1
TMEM260-211ENST00000556648 COX7A1P24310 79 aa8.19□□□□□ -1.1
TMEM260-211ENST00000556648 MAS1LP35410 378 aa8.19□□□□□ -1.1
TMEM260-211ENST00000556648 RPL35P42766 123 aaKnown RBP8.19□□□□□ -1.1
TMEM260-211ENST00000556648 RAB5BP61020 215 aa8.19□□□□□ -1.1
TMEM260-211ENST00000556648 RPL8P62917 257 aaKnown RBP8.19□□□□□ -1.1
TMEM260-211ENST00000556648 ELOBQ15370 118 aa8.19□□□□□ -1.1
TMEM260-211ENST00000556648 MRGPRG-AS1Q2M3A8 158 aa8.19□□□□□ -1.1
TMEM260-211ENST00000556648 PDPNQ86YL7 162 aa8.19□□□□□ -1.1
TMEM260-211ENST00000556648 TGIF2LXQ8IUE1 241 aa8.19□□□□□ -1.1
TMEM260-211ENST00000556648 C8orf31Q8N9H6 132 aa8.19□□□□□ -1.1
TMEM260-211ENST00000556648 ABHD5Q8WTS1 349 aa8.19□□□□□ -1.1
TMEM260-211ENST00000556648 TMEM186Q96B77 213 aa8.19□□□□□ -1.1
TMEM260-211ENST00000556648 NDUFA4L2Q9NRX3 87 aa8.19□□□□□ -1.1
TMEM260-211ENST00000556648 WASHC3Q9Y3C0 194 aa8.19□□□□□ -1.1
TMEM260-211ENST00000556648 IGHV2-26A0A0B4J1V2 119 aa8.18□□□□□ -1.1
TMEM260-211ENST00000556648 A0A1W2PPV4 95 aa8.18□□□□□ -1.1
TMEM260-211ENST00000556648 C11orf94C9JXX5 98 aa8.18□□□□□ -1.1
TMEM260-211ENST00000556648 SLC25A17O43808 307 aa8.18□□□□□ -1.1
TMEM260-211ENST00000556648 FOXH1O75593 365 aa8.18□□□□□ -1.1
TMEM260-211ENST00000556648 SOD3P08294 240 aa8.18□□□□□ -1.1
TMEM260-211ENST00000556648 LINC00869P0C866 280 aa8.18□□□□□ -1.1
TMEM260-211ENST00000556648 CNTFRP26992 372 aa8.18□□□□□ -1.1
TMEM260-211ENST00000556648 PPOXP50336 477 aa8.18□□□□□ -1.1
TMEM260-211ENST00000556648 ZNF137PP52743 207 aa8.18□□□□□ -1.1
TMEM260-211ENST00000556648 SSBP2P81877 361 aaPredicted RBP8.18□□□□□ -1.1
TMEM260-211ENST00000556648 ADIRFQ15847 76 aa8.18□□□□□ -1.1
TMEM260-211ENST00000556648 BSXQ3C1V8 233 aa8.18□□□□□ -1.1
TMEM260-211ENST00000556648 FAM71F2Q6NXP2 309 aa8.18□□□□□ -1.1
TMEM260-211ENST00000556648 TEPPQ6URK8 271 aa8.18□□□□□ -1.1
TMEM260-211ENST00000556648 OR51G1Q8NGK1 321 aa8.18□□□□□ -1.1
TMEM260-211ENST00000556648 OR5B3Q8NH48 314 aa8.18□□□□□ -1.1
TMEM260-211ENST00000556648 TMEM167AQ8TBQ9 72 aa8.18□□□□□ -1.1
TMEM260-211ENST00000556648 ZNF430Q9H8G1 570 aaPredicted RBP8.18□□□□□ -1.1
TMEM260-211ENST00000556648 SEPSECSQ9HD40 501 aaKnown RBP8.18□□□□□ -1.1
TMEM260-211ENST00000556648 BIN3Q9NQY0 253 aa8.18□□□□□ -1.1
TMEM260-211ENST00000556648 KLF2Q9Y5W3 355 aaPredicted RBP8.18□□□□□ -1.1
TMEM260-211ENST00000556648 TRBV23-1A0A0A0MS06 115 aa8.17□□□□□ -1.1
TMEM260-211ENST00000556648 A0A1W2PPR1 153 aa8.17□□□□□ -1.1
TMEM260-211ENST00000556648 C22orf46C9J442 243 aa8.17□□□□□ -1.1
TMEM260-211ENST00000556648 ENSAO43768 121 aaKnown RBP8.17□□□□□ -1.1
TMEM260-211ENST00000556648 REG1AP05451 166 aa8.17□□□□□ -1.1
TMEM260-211ENST00000556648 GATA2P23769 480 aaPredicted RBP8.17□□□□□ -1.1
TMEM260-211ENST00000556648 AKR1D1P51857 326 aa8.17□□□□□ -1.1
TMEM260-211ENST00000556648 SNRPEP62304 92 aaKnown RBP8.17□□□□□ -1.1
TMEM260-211ENST00000556648 WT1-ASQ06250 92 aa8.17□□□□□ -1.1
TMEM260-211ENST00000556648 C2orf83Q53S99 150 aa8.17□□□□□ -1.1
TMEM260-211ENST00000556648 C19orf35Q6ZS72 473 aa8.17□□□□□ -1.1
TMEM260-211ENST00000556648 CYP2G1PQ6ZSU1 146 aa8.17□□□□□ -1.1
TMEM260-211ENST00000556648 OR4C13Q8NGP0 309 aa8.17□□□□□ -1.1
TMEM260-211ENST00000556648 MALSU1Q96EH3 234 aa8.17□□□□□ -1.1
TMEM260-211ENST00000556648 NEIL1Q96FI4 390 aaPredicted RBP8.17□□□□□ -1.1
TMEM260-211ENST00000556648 ACTL6BO94805 426 aa8.17□□□□□ -1.1
TMEM260-211ENST00000556648 IGHV3-48P01763 117 aa8.17□□□□□ -1.1
TMEM260-211ENST00000556648 STAG3L2P0CL84 134 aa8.17□□□□□ -1.1
TMEM260-211ENST00000556648 STAG3L3P0CL85 134 aa8.17□□□□□ -1.1
TMEM260-211ENST00000556648 RPS10P46783 165 aaKnown RBP8.17□□□□□ -1.1
TMEM260-211ENST00000556648 RPL23P62829 140 aaKnown RBP8.17□□□□□ -1.1
TMEM260-211ENST00000556648 GNB1P62873 340 aa8.17□□□□□ -1.1
TMEM260-211ENST00000556648 PRR20EP86478 221 aa8.17□□□□□ -1.1
TMEM260-211ENST00000556648 PRR20CP86479 221 aa8.17□□□□□ -1.1
TMEM260-211ENST00000556648 PRR20DP86480 221 aa8.17□□□□□ -1.1
TMEM260-211ENST00000556648 PRR20BP86481 221 aa8.17□□□□□ -1.1
TMEM260-211ENST00000556648 PRR20AP86496 221 aa8.17□□□□□ -1.1
TMEM260-211ENST00000556648 GAMTQ14353 236 aa8.17□□□□□ -1.1
TMEM260-211ENST00000556648 CST9LP1Q5W188 147 aa8.17□□□□□ -1.1
TMEM260-211ENST00000556648 C11orf71Q6IPW1 123 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms