RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 QTRT1Q9BXR0 403 aaKnown RBP10.57□□□□□ -0.72
CHMP4BP1-201ENST00000556017 MAP6D1Q9H9H5 199 aa10.57□□□□□ -0.72
CHMP4BP1-201ENST00000556017 HRASLSQ9HDD0 168 aa10.57□□□□□ -0.72
CHMP4BP1-201ENST00000556017 TMEM140Q9NV12 185 aa10.57□□□□□ -0.72
CHMP4BP1-201ENST00000556017 RHBDL2Q9NX52 303 aa10.57□□□□□ -0.72
CHMP4BP1-201ENST00000556017 DNAH2Q9P225 4427 aa10.56□□□□□ -0.72
CHMP4BP1-201ENST00000556017 TEX50A0A1B0GTY4 177 aa10.56□□□□□ -0.72
CHMP4BP1-201ENST00000556017 OR2T8A6NH00 312 aa10.56□□□□□ -0.72
CHMP4BP1-201ENST00000556017 K7EIM0 57 aa10.56□□□□□ -0.72
CHMP4BP1-201ENST00000556017 HPRT1P00492 218 aa10.56□□□□□ -0.72
CHMP4BP1-201ENST00000556017 CLEC2LP0C7M8 214 aa10.56□□□□□ -0.72
CHMP4BP1-201ENST00000556017 NQO2P16083 231 aa10.56□□□□□ -0.72
CHMP4BP1-201ENST00000556017 RPL35AP18077 110 aaKnown RBP10.56□□□□□ -0.72
CHMP4BP1-201ENST00000556017 SFXN4Q6P4A7 337 aa10.56□□□□□ -0.72
CHMP4BP1-201ENST00000556017 ZBTB34Q8NCN2 500 aa10.56□□□□□ -0.72
CHMP4BP1-201ENST00000556017 DAZ1Q9NQZ3 744 aaKnown RBP10.56□□□□□ -0.72
CHMP4BP1-201ENST00000556017 DNAH17Q9UFH2 4485 aa10.56□□□□□ -0.72
CHMP4BP1-201ENST00000556017 IGHV3-21A0A0B4J1V1 117 aa10.55□□□□□ -0.72
CHMP4BP1-201ENST00000556017 OR13C7P0DN81 318 aa10.55□□□□□ -0.72
CHMP4BP1-201ENST00000556017 GNRHRP30968 328 aa10.55□□□□□ -0.72
CHMP4BP1-201ENST00000556017 PRR20EP86478 221 aa10.55□□□□□ -0.72
CHMP4BP1-201ENST00000556017 PRR20CP86479 221 aa10.55□□□□□ -0.72
CHMP4BP1-201ENST00000556017 PRR20DP86480 221 aa10.55□□□□□ -0.72
CHMP4BP1-201ENST00000556017 PRR20BP86481 221 aa10.55□□□□□ -0.72
CHMP4BP1-201ENST00000556017 PRR20AP86496 221 aa10.55□□□□□ -0.72
CHMP4BP1-201ENST00000556017 LGALS9CQ6DKI2 356 aa10.55□□□□□ -0.72
CHMP4BP1-201ENST00000556017 SCARB1Q8WTV0 552 aa10.55□□□□□ -0.72
CHMP4BP1-201ENST00000556017 PHLDA1Q8WV24 401 aaPredicted RBP10.55□□□□□ -0.72
CHMP4BP1-201ENST00000556017 CNBD2Q96M20 576 aa10.55□□□□□ -0.72
CHMP4BP1-201ENST00000556017 SLC5A7Q9GZV3 580 aa10.55□□□□□ -0.72
CHMP4BP1-201ENST00000556017 RNF167Q9H6Y7 350 aa10.55□□□□□ -0.72
CHMP4BP1-201ENST00000556017 PLEKHA2Q9HB19 425 aa10.55□□□□□ -0.72
CHMP4BP1-201ENST00000556017 NDUFA4L2Q9NRX3 87 aa10.55□□□□□ -0.72
CHMP4BP1-201ENST00000556017 RRP15Q9Y3B9 282 aaKnown RBP10.55□□□□□ -0.72
CHMP4BP1-201ENST00000556017 KIAA1109Q2LD37 5005 aa10.55□□□□□ -0.72
CHMP4BP1-201ENST00000556017 TRAV18A0A075B6X5 111 aa10.54□□□□□ -0.72
CHMP4BP1-201ENST00000556017 DBX1A6NMT0 343 aa10.54□□□□□ -0.72
CHMP4BP1-201ENST00000556017 K7EMT4 169 aa10.54□□□□□ -0.72
CHMP4BP1-201ENST00000556017 NDUFA4O00483 81 aa10.54□□□□□ -0.72
CHMP4BP1-201ENST00000556017 ZNF207O43670 478 aaKnown RBP10.54□□□□□ -0.72
CHMP4BP1-201ENST00000556017 SCGNO76038 276 aa10.54□□□□□ -0.72
CHMP4BP1-201ENST00000556017 FCER2P06734 321 aa10.54□□□□□ -0.72
CHMP4BP1-201ENST00000556017 CTSDP07339 412 aaPredicted RBP10.54□□□□□ -0.72
CHMP4BP1-201ENST00000556017 CTSGP08311 255 aa10.54□□□□□ -0.72
CHMP4BP1-201ENST00000556017 SDC2P34741 201 aa10.54□□□□□ -0.72
CHMP4BP1-201ENST00000556017 IZUMO2Q6UXV1 221 aa10.54□□□□□ -0.72
CHMP4BP1-201ENST00000556017 TPRA1Q86W33 373 aa10.54□□□□□ -0.72
CHMP4BP1-201ENST00000556017 APRG1Q8IVJ8 170 aa10.54□□□□□ -0.72
CHMP4BP1-201ENST00000556017 SLC38A6Q8IZM9 456 aa10.54□□□□□ -0.72
CHMP4BP1-201ENST00000556017 SPARTQ8N0X7 666 aa10.54□□□□□ -0.72
CHMP4BP1-201ENST00000556017 STPG3Q8N7X2 389 aa10.54□□□□□ -0.72
CHMP4BP1-201ENST00000556017 OR51H1Q8NH63 302 aa10.54□□□□□ -0.72
CHMP4BP1-201ENST00000556017 GIMAP1Q8WWP7 306 aa10.54□□□□□ -0.72
CHMP4BP1-201ENST00000556017 GALNT14Q96FL9 552 aa10.54□□□□□ -0.72
CHMP4BP1-201ENST00000556017 BSCL2Q96G97 398 aaPredicted RBP10.54□□□□□ -0.72
CHMP4BP1-201ENST00000556017 COMMD5Q9GZQ3 224 aa10.54□□□□□ -0.72
CHMP4BP1-201ENST00000556017 ETV7Q9Y603 341 aa10.54□□□□□ -0.72
CHMP4BP1-201ENST00000556017 F11RQ9Y624 299 aaKnown RBP10.54□□□□□ -0.72
CHMP4BP1-201ENST00000556017 AGRNO00468 2067 aa10.54□□□□□ -0.72
CHMP4BP1-201ENST00000556017 PKHD1P08F94 4074 aa10.53□□□□□ -0.72
CHMP4BP1-201ENST00000556017 TRAPPC2P0DI81 140 aa10.53□□□□□ -0.72
CHMP4BP1-201ENST00000556017 TRAPPC2BP0DI82 140 aa10.53□□□□□ -0.72
CHMP4BP1-201ENST00000556017 FXYD4P59646 89 aa10.53□□□□□ -0.72
CHMP4BP1-201ENST00000556017 ARPC4P59998 168 aa10.53□□□□□ -0.72
CHMP4BP1-201ENST00000556017 SLC25A24Q6NUK1 477 aa10.53□□□□□ -0.72
CHMP4BP1-201ENST00000556017 SPSB3Q6PJ21 355 aa10.53□□□□□ -0.72
CHMP4BP1-201ENST00000556017 OR5B3Q8NH48 314 aa10.53□□□□□ -0.72
CHMP4BP1-201ENST00000556017 ATP6V0BQ99437 205 aa10.53□□□□□ -0.72
CHMP4BP1-201ENST00000556017 RNF2Q99496 336 aa10.53□□□□□ -0.72
CHMP4BP1-201ENST00000556017 AIFM2Q9BRQ8 373 aa10.53□□□□□ -0.72
CHMP4BP1-201ENST00000556017 AUNIPQ9H7T9 357 aa10.53□□□□□ -0.72
CHMP4BP1-201ENST00000556017 COMMD9Q9P000 198 aa10.53□□□□□ -0.72
CHMP4BP1-201ENST00000556017 THYN1Q9P016 225 aa10.53□□□□□ -0.72
CHMP4BP1-201ENST00000556017 SMPXQ9UHP9 88 aa10.53□□□□□ -0.72
CHMP4BP1-201ENST00000556017 KLK5Q9Y337 293 aaPredicted RBP10.53□□□□□ -0.72
CHMP4BP1-201ENST00000556017 GABARAPL2P60520 117 aa10.52□□□□□ -0.73
CHMP4BP1-201ENST00000556017 FAM90A2PQ658T7 463 aa10.52□□□□□ -0.73
CHMP4BP1-201ENST00000556017 TMEM17Q86X19 198 aa10.52□□□□□ -0.73
CHMP4BP1-201ENST00000556017 CADM3Q8N126 398 aa10.52□□□□□ -0.73
CHMP4BP1-201ENST00000556017 OR5AP2Q8NGF4 316 aa10.52□□□□□ -0.73
CHMP4BP1-201ENST00000556017 OR1L8Q8NGR8 309 aa10.52□□□□□ -0.73
CHMP4BP1-201ENST00000556017 C21orf62Q9NYP8 219 aa10.52□□□□□ -0.73
CHMP4BP1-201ENST00000556017 ANAPC10Q9UM13 185 aa10.52□□□□□ -0.73
CHMP4BP1-201ENST00000556017 NSG2Q9Y328 171 aa10.52□□□□□ -0.73
CHMP4BP1-201ENST00000556017 OR4C46A6NHA9 309 aa10.51□□□□□ -0.73
CHMP4BP1-201ENST00000556017 MARCH11A6NNE9 402 aa10.51□□□□□ -0.73
CHMP4BP1-201ENST00000556017 C15orf62A8K5M9 175 aa10.51□□□□□ -0.73
CHMP4BP1-201ENST00000556017 CHEK1O14757 476 aa10.51□□□□□ -0.73
CHMP4BP1-201ENST00000556017 NANOS2P60321 138 aaKnown RBP10.51□□□□□ -0.73
CHMP4BP1-201ENST00000556017 CATR1Q13166 79 aa10.51□□□□□ -0.73
CHMP4BP1-201ENST00000556017 THOC7Q6I9Y2 204 aaKnown RBP10.51□□□□□ -0.73
CHMP4BP1-201ENST00000556017 LAMTOR1Q6IAA8 161 aa10.51□□□□□ -0.73
CHMP4BP1-201ENST00000556017 DMBX1Q8NFW5 382 aa10.51□□□□□ -0.73
CHMP4BP1-201ENST00000556017 CD300LFQ8TDQ1 290 aa10.51□□□□□ -0.73
CHMP4BP1-201ENST00000556017 FCAMRQ8WWV6 532 aa10.51□□□□□ -0.73
CHMP4BP1-201ENST00000556017 OR10C1Q96KK4 312 aa10.51□□□□□ -0.73
CHMP4BP1-201ENST00000556017 C20orf24Q9BUV8 137 aa10.51□□□□□ -0.73
CHMP4BP1-201ENST00000556017 BLOC1S6Q9UL45 172 aa10.51□□□□□ -0.73
CHMP4BP1-201ENST00000556017 IGHV3-49A0A0A0MS15 119 aa10.5□□□□□ -0.73
CHMP4BP1-201ENST00000556017 IGHV7-4-1A0A0J9YVY3 117 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms