RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 RITA1Q96K30 269 aa8.91□□□□□ -0.98
SHMT2-220ENST00000555634 TMEM68Q96MH6 324 aa8.91□□□□□ -0.98
SHMT2-220ENST00000555634 WSB1Q9Y6I7 421 aa8.91□□□□□ -0.98
SHMT2-220ENST00000555634 FXYD6-FXYD2A0A087WZ82 144 aa8.9□□□□□ -0.98
SHMT2-220ENST00000555634 K7EPK0 472 aa8.9□□□□□ -0.98
SHMT2-220ENST00000555634 CHST1O43916 411 aa8.9□□□□□ -0.98
SHMT2-220ENST00000555634 PITX3O75364 302 aa8.9□□□□□ -0.98
SHMT2-220ENST00000555634 DEDDO75618 318 aa8.9□□□□□ -0.98
SHMT2-220ENST00000555634 IFNA10P01566 189 aa8.9□□□□□ -0.98
SHMT2-220ENST00000555634 MBPP02686 304 aaPredicted RBP8.9□□□□□ -0.98
SHMT2-220ENST00000555634 OPN1MWP04001 364 aa8.9□□□□□ -0.98
SHMT2-220ENST00000555634 OPN1MW2P0DN77 364 aa8.9□□□□□ -0.98
SHMT2-220ENST00000555634 OPN1MW3P0DN78 364 aa8.9□□□□□ -0.98
SHMT2-220ENST00000555634 DEFA4P12838 97 aa8.9□□□□□ -0.98
SHMT2-220ENST00000555634 HTR2BP41595 481 aa8.9□□□□□ -0.98
SHMT2-220ENST00000555634 CAV2P51636 162 aa8.9□□□□□ -0.98
SHMT2-220ENST00000555634 ATP5IP56385 69 aaPredicted RBP8.9□□□□□ -0.98
SHMT2-220ENST00000555634 RAB11AP62491 216 aa8.9□□□□□ -0.98
SHMT2-220ENST00000555634 SLC35B1P78383 322 aa8.9□□□□□ -0.98
SHMT2-220ENST00000555634 RAB32Q13637 225 aa8.9□□□□□ -0.98
SHMT2-220ENST00000555634 ECSCRQ19T08 205 aa8.9□□□□□ -0.98
SHMT2-220ENST00000555634 C2orf68Q2NKX9 166 aa8.9□□□□□ -0.98
SHMT2-220ENST00000555634 PDLIM3Q53GG5 364 aaPredicted RBP8.9□□□□□ -0.98
SHMT2-220ENST00000555634 PRSS54Q6PEW0 395 aa8.9□□□□□ -0.98
SHMT2-220ENST00000555634 DUX5Q96PT3 197 aa8.9□□□□□ -0.98
SHMT2-220ENST00000555634 SLC25A31Q9H0C2 315 aa8.9□□□□□ -0.98
SHMT2-220ENST00000555634 MAGT1Q9H0U3 335 aa8.9□□□□□ -0.98
SHMT2-220ENST00000555634 RBKSQ9H477 322 aa8.9□□□□□ -0.98
SHMT2-220ENST00000555634 RANGRFQ9HD47 186 aaPredicted RBP8.9□□□□□ -0.98
SHMT2-220ENST00000555634 PLSCR3Q9NRY6 295 aa8.9□□□□□ -0.98
SHMT2-220ENST00000555634 PAIP2BQ9ULR5 123 aaKnown RBP8.9□□□□□ -0.98
SHMT2-220ENST00000555634 RCL1Q9Y2P8 373 aaKnown RBP8.9□□□□□ -0.98
SHMT2-220ENST00000555634 STRAPQ9Y3F4 350 aaKnown RBP8.9□□□□□ -0.98
SHMT2-220ENST00000555634 TRAV3A0A0B4J244 114 aa8.89□□□□□ -0.99
SHMT2-220ENST00000555634 TEX50A0A1B0GTY4 177 aa8.89□□□□□ -0.99
SHMT2-220ENST00000555634 CORTO00230 105 aa8.89□□□□□ -0.99
SHMT2-220ENST00000555634 TSC22D2O75157 780 aa8.89□□□□□ -0.99
SHMT2-220ENST00000555634 SCGB2A1O75556 95 aa8.89□□□□□ -0.99
SHMT2-220ENST00000555634 MPC2O95563 127 aa8.89□□□□□ -0.99
SHMT2-220ENST00000555634 IL6RP08887 468 aaPredicted RBP8.89□□□□□ -0.99
SHMT2-220ENST00000555634 OR8U8P0C7N1 319 aa8.89□□□□□ -0.99
SHMT2-220ENST00000555634 C4BPBP20851 252 aa8.89□□□□□ -0.99
SHMT2-220ENST00000555634 VDAC2P45880 294 aaPredicted RBP8.89□□□□□ -0.99
SHMT2-220ENST00000555634 TAS2R30P59541 319 aa8.89□□□□□ -0.99
SHMT2-220ENST00000555634 POLR2GP62487 172 aaKnown RBP eCLIP8.89□□□□□ -0.99
SHMT2-220ENST00000555634 UBA52P62987 128 aaKnown RBP8.89□□□□□ -0.99
SHMT2-220ENST00000555634 HBG1P69891 147 aa8.89□□□□□ -0.99
SHMT2-220ENST00000555634 HBG2P69892 147 aa8.89□□□□□ -0.99
SHMT2-220ENST00000555634 CX3CL1P78423 397 aa8.89□□□□□ -0.99
SHMT2-220ENST00000555634 ID3Q02535 119 aa8.89□□□□□ -0.99
SHMT2-220ENST00000555634 CXorf66Q5JRM2 361 aaPredicted RBP8.89□□□□□ -0.99
SHMT2-220ENST00000555634 C11orf87Q6NUJ2 197 aa8.89□□□□□ -0.99
SHMT2-220ENST00000555634 Q6ZRM9 215 aa8.89□□□□□ -0.99
SHMT2-220ENST00000555634 SLC24A4Q8NFF2 622 aa8.89□□□□□ -0.99
SHMT2-220ENST00000555634 SGMS2Q8NHU3 365 aa8.89□□□□□ -0.99
SHMT2-220ENST00000555634 PSENENQ9NZ42 101 aa8.89□□□□□ -0.99
SHMT2-220ENST00000555634 THYN1Q9P016 225 aa8.89□□□□□ -0.99
SHMT2-220ENST00000555634 MBD2Q9UBB5 411 aa8.89□□□□□ -0.99
SHMT2-220ENST00000555634 IGHV7-81A0A0B4J1V7 117 aa8.88□□□□□ -0.99
SHMT2-220ENST00000555634 ATP6V0E1O15342 81 aa8.88□□□□□ -0.99
SHMT2-220ENST00000555634 OR13C7P0DN81 318 aa8.88□□□□□ -0.99
SHMT2-220ENST00000555634 IAPPP10997 89 aa8.88□□□□□ -0.99
SHMT2-220ENST00000555634 NPY1RP25929 384 aa8.88□□□□□ -0.99
SHMT2-220ENST00000555634 PJVKQ0ZLH3 352 aa8.88□□□□□ -0.99
SHMT2-220ENST00000555634 SPINK9Q5DT21 86 aa8.88□□□□□ -0.99
SHMT2-220ENST00000555634 C10orf55Q5SWW7 151 aa8.88□□□□□ -0.99
SHMT2-220ENST00000555634 UNQ5815/PRO19632Q6UWF5 114 aa8.88□□□□□ -0.99
SHMT2-220ENST00000555634 PPP1R14BQ96C90 147 aa8.88□□□□□ -0.99
SHMT2-220ENST00000555634 NDUFA4L2Q9NRX3 87 aa8.88□□□□□ -0.99
SHMT2-220ENST00000555634 U3KQ87 197 aa8.88□□□□□ -0.99
SHMT2-220ENST00000555634 MXRA5Q9NR99 2828 aa8.87□□□□□ -0.99
SHMT2-220ENST00000555634 TNCP24821 2201 aa8.87□□□□□ -0.99
SHMT2-220ENST00000555634 TRAV41A0A0B4J266 112 aa8.87□□□□□ -0.99
SHMT2-220ENST00000555634 RPS10-NUDT3A0A1W2PQS6 291 aa8.87□□□□□ -0.99
SHMT2-220ENST00000555634 FAM181BA6NEQ2 426 aa8.87□□□□□ -0.99
SHMT2-220ENST00000555634 MSGN1A6NI15 193 aa8.87□□□□□ -0.99
SHMT2-220ENST00000555634 NPIPB5A8MRT5 1133 aa8.87□□□□□ -0.99
SHMT2-220ENST00000555634 INS-IGF2F8WCM5 200 aa8.87□□□□□ -0.99
SHMT2-220ENST00000555634 IGHG2P01859 326 aa8.87□□□□□ -0.99
SHMT2-220ENST00000555634 C1QBP02746 253 aa8.87□□□□□ -0.99
SHMT2-220ENST00000555634 HIST1H1BP16401 226 aaKnown RBP8.87□□□□□ -0.99
SHMT2-220ENST00000555634 P2RY1P47900 373 aa8.87□□□□□ -0.99
SHMT2-220ENST00000555634 BAXQ07812 192 aa8.87□□□□□ -0.99
SHMT2-220ENST00000555634 TUSC1Q2TAM9 212 aa8.87□□□□□ -0.99
SHMT2-220ENST00000555634 AKIRIN2Q53H80 203 aa8.87□□□□□ -0.99
SHMT2-220ENST00000555634 SPANXN5Q5MJ07 72 aa8.87□□□□□ -0.99
SHMT2-220ENST00000555634 LILRB2Q8N423 598 aa8.87□□□□□ -0.99
SHMT2-220ENST00000555634 OR2C3Q8N628 320 aa8.87□□□□□ -0.99
SHMT2-220ENST00000555634 OR4F5Q8NH21 305 aa8.87□□□□□ -0.99
SHMT2-220ENST00000555634 RBMXL1Q96E39 390 aaKnown RBP8.87□□□□□ -0.99
SHMT2-220ENST00000555634 SMIM8Q96KF7 97 aa8.87□□□□□ -0.99
SHMT2-220ENST00000555634 HYLS1Q96M11 299 aa8.87□□□□□ -0.99
SHMT2-220ENST00000555634 HSPB9Q9BQS6 159 aa8.87□□□□□ -0.99
SHMT2-220ENST00000555634 ZNF355PQ9NSJ1 428 aa8.87□□□□□ -0.99
SHMT2-220ENST00000555634 LYRM2Q9NU23 88 aaPredicted RBP8.87□□□□□ -0.99
SHMT2-220ENST00000555634 ZNF580Q9UK33 172 aa8.87□□□□□ -0.99
SHMT2-220ENST00000555634 MTORP42345 2549 aa8.86□□□□□ -0.99
SHMT2-220ENST00000555634 AKAP9Q99996 3911 aa8.86□□□□□ -0.99
SHMT2-220ENST00000555634 H3BP45 60 aa8.86□□□□□ -0.99
SHMT2-220ENST00000555634 FCN1O00602 326 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms