RNA–Protein interactions for RNA: ENST00000555022.5

SYNE2-217, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,396 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-217ENST00000555022 HCFC1P51610 2035 aa7.38□□□□□ -1.23
SYNE2-217ENST00000555022 NBASA2RRP1 2371 aa7.38□□□□□ -1.23
SYNE2-217ENST00000555022 YLPM1P49750 1951 aaKnown RBP7.38□□□□□ -1.23
SYNE2-217ENST00000555022 A0A087X0K7 114 aa7.38□□□□□ -1.23
SYNE2-217ENST00000555022 PMS2P5A8MQ11 134 aa7.38□□□□□ -1.23
SYNE2-217ENST00000555022 PATE3B3GLJ2 98 aa7.38□□□□□ -1.23
SYNE2-217ENST00000555022 APCSP02743 223 aa7.38□□□□□ -1.23
SYNE2-217ENST00000555022 LTBRP36941 435 aa7.38□□□□□ -1.23
SYNE2-217ENST00000555022 GNG5P63218 68 aa7.38□□□□□ -1.23
SYNE2-217ENST00000555022 ARG2P78540 354 aa7.38□□□□□ -1.23
SYNE2-217ENST00000555022 GABRA6Q16445 453 aa7.38□□□□□ -1.23
SYNE2-217ENST00000555022 Q5PR19 223 aa7.38□□□□□ -1.23
SYNE2-217ENST00000555022 KCNS1Q96KK3 526 aa7.38□□□□□ -1.23
SYNE2-217ENST00000555022 GGTLC1Q9BX51 225 aa7.38□□□□□ -1.23
SYNE2-217ENST00000555022 UBE2ZQ9H832 354 aaPredicted RBP7.38□□□□□ -1.23
SYNE2-217ENST00000555022 COX11Q9Y6N1 276 aa7.38□□□□□ -1.23
SYNE2-217ENST00000555022 EXPH5Q8NEV8 1989 aa7.38□□□□□ -1.23
SYNE2-217ENST00000555022 INTS1Q8N201 2190 aaKnown RBP7.38□□□□□ -1.23
SYNE2-217ENST00000555022 KALRNO60229 2985 aa7.38□□□□□ -1.23
SYNE2-217ENST00000555022 HAND1O96004 215 aa7.37□□□□□ -1.23
SYNE2-217ENST00000555022 APOA2P02652 100 aa7.37□□□□□ -1.23
SYNE2-217ENST00000555022 COX6A1P12074 109 aa7.37□□□□□ -1.23
SYNE2-217ENST00000555022 CD46P15529 392 aa7.37□□□□□ -1.23
SYNE2-217ENST00000555022 MAGEA5P43359 124 aa7.37□□□□□ -1.23
SYNE2-217ENST00000555022 CATR1Q13166 79 aa7.37□□□□□ -1.23
SYNE2-217ENST00000555022 UBE2V1Q13404 147 aa7.37□□□□□ -1.23
SYNE2-217ENST00000555022 EBLN2Q6P2I7 272 aa7.37□□□□□ -1.23
SYNE2-217ENST00000555022 MDP1Q86V88 176 aa7.37□□□□□ -1.23
SYNE2-217ENST00000555022 NANOS1Q8WY41 292 aaKnown RBP7.37□□□□□ -1.23
SYNE2-217ENST00000555022 TPPP3Q9BW30 176 aa7.37□□□□□ -1.23
SYNE2-217ENST00000555022 DEFB127Q9H1M4 99 aa7.37□□□□□ -1.23
SYNE2-217ENST00000555022 GPR12P47775 334 aa7.37□□□□□ -1.23
SYNE2-217ENST00000555022 B3GALT5-AS1P59052 145 aa7.37□□□□□ -1.23
SYNE2-217ENST00000555022 PLGLB1Q02325 96 aa7.37□□□□□ -1.23
SYNE2-217ENST00000555022 FOXL1Q12952 345 aa7.37□□□□□ -1.23
SYNE2-217ENST00000555022 TIGITQ495A1 244 aa7.37□□□□□ -1.23
SYNE2-217ENST00000555022 Q6P435 159 aa7.37□□□□□ -1.23
SYNE2-217ENST00000555022 DEFB108BQ8NET1 73 aa7.37□□□□□ -1.23
SYNE2-217ENST00000555022 ZNF331Q9NQX6 463 aaPredicted RBP7.37□□□□□ -1.23
SYNE2-217ENST00000555022 SLC45A2Q9UMX9 530 aa7.37□□□□□ -1.23
SYNE2-217ENST00000555022 HILPDAQ9Y5L2 63 aa7.37□□□□□ -1.23
SYNE2-217ENST00000555022 IGLV3-32A0A0A0MS00 114 aa7.37□□□□□ -1.23
SYNE2-217ENST00000555022 IGHV1-45A0A0A0MS14 117 aa7.37□□□□□ -1.23
SYNE2-217ENST00000555022 ZNF207O43670 478 aaKnown RBP7.37□□□□□ -1.23
SYNE2-217ENST00000555022 EFNB3Q15768 340 aa7.37□□□□□ -1.23
SYNE2-217ENST00000555022 SAPCD1Q5SSQ6 148 aa7.37□□□□□ -1.23
SYNE2-217ENST00000555022 CENPVQ7Z7K6 275 aaPredicted RBP7.37□□□□□ -1.23
SYNE2-217ENST00000555022 C17orf82Q86X59 251 aaPredicted RBP7.37□□□□□ -1.23
SYNE2-217ENST00000555022 BLNKQ8WV28 456 aa7.37□□□□□ -1.23
SYNE2-217ENST00000555022 BCL2L2Q92843 193 aaPredicted RBP7.37□□□□□ -1.23
SYNE2-217ENST00000555022 RAB37Q96AX2 223 aa7.37□□□□□ -1.23
SYNE2-217ENST00000555022 CACNA1HO95180 2353 aa7.37□□□□□ -1.23
SYNE2-217ENST00000555022 WNK2Q9Y3S1 2297 aa7.36□□□□□ -1.23
SYNE2-217ENST00000555022 PYYP10082 97 aa7.36□□□□□ -1.23
SYNE2-217ENST00000555022 PRB3Q04118 309 aaPredicted RBP7.36□□□□□ -1.23
SYNE2-217ENST00000555022 TCF24Q7RTU0 167 aa7.36□□□□□ -1.23
SYNE2-217ENST00000555022 OR52E5Q8NH55 327 aa7.36□□□□□ -1.23
SYNE2-217ENST00000555022 V9GYV3 84 aa7.36□□□□□ -1.23
SYNE2-217ENST00000555022 GJE1A6NN92 205 aa7.36□□□□□ -1.23
SYNE2-217ENST00000555022 TNFSF4P23510 183 aa7.36□□□□□ -1.23
SYNE2-217ENST00000555022 YPEL3P61236 119 aaPredicted RBP7.36□□□□□ -1.23
SYNE2-217ENST00000555022 IBA57Q5T440 356 aaKnown RBP7.36□□□□□ -1.23
SYNE2-217ENST00000555022 MORN5Q5VZ52 161 aa7.36□□□□□ -1.23
SYNE2-217ENST00000555022 TMEM136Q6ZRR5 245 aa7.36□□□□□ -1.23
SYNE2-217ENST00000555022 TCTEX1D1Q8N7M0 179 aa7.36□□□□□ -1.23
SYNE2-217ENST00000555022 WDR83OSQ9Y284 106 aa7.36□□□□□ -1.23
SYNE2-217ENST00000555022 LOXL2Q9Y4K0 774 aa7.36□□□□□ -1.23
SYNE2-217ENST00000555022 CXorf1O96002 111 aa7.36□□□□□ -1.23
SYNE2-217ENST00000555022 CD99P14209 185 aa7.36□□□□□ -1.23
SYNE2-217ENST00000555022 KLF3P57682 345 aaPredicted RBP7.36□□□□□ -1.23
SYNE2-217ENST00000555022 ZNF497Q6ZNH5 498 aa7.36□□□□□ -1.23
SYNE2-217ENST00000555022 SPEM1Q8N4L4 309 aa7.36□□□□□ -1.23
SYNE2-217ENST00000555022 ZNF645Q8N7E2 425 aa7.36□□□□□ -1.23
SYNE2-217ENST00000555022 RND1Q92730 232 aa7.36□□□□□ -1.23
SYNE2-217ENST00000555022 WDR54Q9H977 334 aa7.36□□□□□ -1.23
SYNE2-217ENST00000555022 PCNX2A6NKB5 2137 aa7.35□□□□□ -1.23
SYNE2-217ENST00000555022 IGLV3-12A0A075B6K2 115 aa7.35□□□□□ -1.23
SYNE2-217ENST00000555022 LNP1A1A4G5 178 aa7.35□□□□□ -1.23
SYNE2-217ENST00000555022 RNF212BA8MTL3 300 aa7.35□□□□□ -1.23
SYNE2-217ENST00000555022 DKK1O94907 266 aa7.35□□□□□ -1.23
SYNE2-217ENST00000555022 MPV17P39210 176 aa7.35□□□□□ -1.23
SYNE2-217ENST00000555022 Q0VFX4 171 aa7.35□□□□□ -1.23
SYNE2-217ENST00000555022 FOXF2Q12947 444 aa7.35□□□□□ -1.23
SYNE2-217ENST00000555022 ANKRD39Q53RE8 183 aa7.35□□□□□ -1.23
SYNE2-217ENST00000555022 MUC15Q8N387 334 aa7.35□□□□□ -1.23
SYNE2-217ENST00000555022 Q8N7P7 452 aa7.35□□□□□ -1.23
SYNE2-217ENST00000555022 OR9G1Q8NH87 305 aa7.35□□□□□ -1.23
SYNE2-217ENST00000555022 Q8TCH9 128 aa7.35□□□□□ -1.23
SYNE2-217ENST00000555022 TIMM9Q9Y5J7 89 aa7.35□□□□□ -1.23
SYNE2-217ENST00000555022 PPIAL4DF5H284 164 aa7.35□□□□□ -1.23
SYNE2-217ENST00000555022 J3QT63 122 aa7.35□□□□□ -1.23
SYNE2-217ENST00000555022 KLK10O43240 276 aa7.35□□□□□ -1.23
SYNE2-217ENST00000555022 CTRLP40313 264 aa7.35□□□□□ -1.23
SYNE2-217ENST00000555022 SLC25A40Q8TBP6 338 aa7.35□□□□□ -1.23
SYNE2-217ENST00000555022 PRDM14Q9GZV8 571 aa7.35□□□□□ -1.23
SYNE2-217ENST00000555022 FNDC4Q9H6D8 234 aaPredicted RBP7.35□□□□□ -1.23
SYNE2-217ENST00000555022 LAMA5O15230 3695 aa7.34□□□□□ -1.23
SYNE2-217ENST00000555022 K7EMI3 77 aa7.34□□□□□ -1.23
SYNE2-217ENST00000555022 STAG3L2P0CL84 134 aa7.34□□□□□ -1.23
SYNE2-217ENST00000555022 STAG3L3P0CL85 134 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms