RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 IGHV1-46P01743 117 aa13.84□□□□□ -0.19
PCNX1-209ENST00000554879 CD55P08174 381 aa13.84□□□□□ -0.19
PCNX1-209ENST00000554879 LYNX1P0DP58 116 aa13.84□□□□□ -0.19
PCNX1-209ENST00000554879 PSG1P11464 419 aa13.84□□□□□ -0.19
PCNX1-209ENST00000554879 G6PCP35575 357 aa13.84□□□□□ -0.19
PCNX1-209ENST00000554879 LHFPL1Q86WI0 220 aa13.84□□□□□ -0.19
PCNX1-209ENST00000554879 NAT8Q9UHE5 227 aa13.84□□□□□ -0.19
PCNX1-209ENST00000554879 ZG16O60844 167 aa13.84□□□□□ -0.19
PCNX1-209ENST00000554879 EGR1P18146 543 aa13.84□□□□□ -0.19
PCNX1-209ENST00000554879 SUPT4H1P63272 117 aaKnown RBP13.84□□□□□ -0.19
PCNX1-209ENST00000554879 SMAGPQ0VAQ4 97 aa13.84□□□□□ -0.19
PCNX1-209ENST00000554879 TMEM267Q0VDI3 215 aaPredicted RBP13.84□□□□□ -0.19
PCNX1-209ENST00000554879 KRTAP27-1Q3LI81 207 aa13.84□□□□□ -0.19
PCNX1-209ENST00000554879 PCSK5Q92824 1860 aa13.83□□□□□ -0.19
PCNX1-209ENST00000554879 TMEM187Q14656 261 aa13.83□□□□□ -0.19
PCNX1-209ENST00000554879 CXorf66Q5JRM2 361 aaPredicted RBP13.83□□□□□ -0.19
PCNX1-209ENST00000554879 SAMD13Q5VXD3 122 aa13.83□□□□□ -0.19
PCNX1-209ENST00000554879 MBNL2Q5VZF2 373 aaKnown RBP13.83□□□□□ -0.19
PCNX1-209ENST00000554879 A0A1W2PRD5 423 aa13.83□□□□□ -0.2
PCNX1-209ENST00000554879 A0A1W2PRF3 423 aa13.83□□□□□ -0.2
PCNX1-209ENST00000554879 A0A1W2PRM7 423 aa13.83□□□□□ -0.2
PCNX1-209ENST00000554879 CHST1O43916 411 aa13.83□□□□□ -0.2
PCNX1-209ENST00000554879 HSPB1P04792 205 aaKnown RBP13.83□□□□□ -0.2
PCNX1-209ENST00000554879 SCGB2A2Q13296 93 aa13.83□□□□□ -0.2
PCNX1-209ENST00000554879 PSENENQ9NZ42 101 aa13.83□□□□□ -0.2
PCNX1-209ENST00000554879 C17orf100A8MU93 164 aa13.83□□□□□ -0.2
PCNX1-209ENST00000554879 IMMP2LQ96T52 175 aa13.83□□□□□ -0.2
PCNX1-209ENST00000554879 COX7A1P24310 79 aa13.82□□□□□ -0.2
PCNX1-209ENST00000554879 GNB2P62879 340 aa13.82□□□□□ -0.2
PCNX1-209ENST00000554879 REG1BP48304 166 aa13.82□□□□□ -0.2
PCNX1-209ENST00000554879 CTDSP1Q9GZU7 261 aa13.82□□□□□ -0.2
PCNX1-209ENST00000554879 RAB1BQ9H0U4 201 aa13.82□□□□□ -0.2
PCNX1-209ENST00000554879 MALRD1Q5VYJ5 2156 aa13.82□□□□□ -0.2
PCNX1-209ENST00000554879 GAGE10A6NGK3 116 aa13.82□□□□□ -0.2
PCNX1-209ENST00000554879 NAPSAO96009 420 aa13.82□□□□□ -0.2
PCNX1-209ENST00000554879 RBX1P62877 108 aa13.82□□□□□ -0.2
PCNX1-209ENST00000554879 STPG4Q8N801 248 aa13.82□□□□□ -0.2
PCNX1-209ENST00000554879 LIME1Q9H400 295 aa13.82□□□□□ -0.2
PCNX1-209ENST00000554879 SLC25A22Q9H936 323 aa13.82□□□□□ -0.2
PCNX1-209ENST00000554879 NAT8BQ9UHF3 227 aa13.82□□□□□ -0.2
PCNX1-209ENST00000554879 YLPM1P49750 1951 aaKnown RBP13.82□□□□□ -0.2
PCNX1-209ENST00000554879 ABCA1O95477 2261 aa13.82□□□□□ -0.2
PCNX1-209ENST00000554879 DUXBA0A1W2PPF3 345 aa13.82□□□□□ -0.2
PCNX1-209ENST00000554879 TRAT1Q6PIZ9 186 aa13.82□□□□□ -0.2
PCNX1-209ENST00000554879 DRAM1Q8N682 238 aa13.82□□□□□ -0.2
PCNX1-209ENST00000554879 SLC24A4Q8NFF2 622 aa13.82□□□□□ -0.2
PCNX1-209ENST00000554879 GCM1Q9NP62 436 aa13.82□□□□□ -0.2
PCNX1-209ENST00000554879 AKAP13Q12802 2813 aa13.81□□□□□ -0.2
PCNX1-209ENST00000554879 A0A087WWC5 75 aa13.81□□□□□ -0.2
PCNX1-209ENST00000554879 TDRG1Q3Y452 100 aa13.81□□□□□ -0.2
PCNX1-209ENST00000554879 OR4B1Q8NGF8 309 aa13.81□□□□□ -0.2
PCNX1-209ENST00000554879 CLEC5AQ9NY25 188 aa13.81□□□□□ -0.2
PCNX1-209ENST00000554879 CALYQ9NYX4 217 aa13.81□□□□□ -0.2
PCNX1-209ENST00000554879 CLEC18AA5D8T8 446 aa13.81□□□□□ -0.2
PCNX1-209ENST00000554879 ZNF253O75346 499 aa13.81□□□□□ -0.2
PCNX1-209ENST00000554879 HSBP1O75506 76 aa13.81□□□□□ -0.2
PCNX1-209ENST00000554879 KIAA1644Q3SXP7 199 aa13.81□□□□□ -0.2
PCNX1-209ENST00000554879 SLC35E4Q6ICL7 350 aa13.81□□□□□ -0.2
PCNX1-209ENST00000554879 ZNF497Q6ZNH5 498 aa13.81□□□□□ -0.2
PCNX1-209ENST00000554879 GCSAMQ8N6F7 178 aa13.81□□□□□ -0.2
PCNX1-209ENST00000554879 CLEC18CQ8NCF0 446 aa13.81□□□□□ -0.2
PCNX1-209ENST00000554879 SGMS2Q8NHU3 365 aa13.81□□□□□ -0.2
PCNX1-209ENST00000554879 ONECUT1Q9UBC0 465 aa13.81□□□□□ -0.2
PCNX1-209ENST00000554879 IGLV1-44P01699 117 aa13.81□□□□□ -0.2
PCNX1-209ENST00000554879 FFAR4Q5NUL3 377 aa13.81□□□□□ -0.2
PCNX1-209ENST00000554879 STUMQ69YW2 141 aa13.81□□□□□ -0.2
PCNX1-209ENST00000554879 Q6P435 159 aa13.81□□□□□ -0.2
PCNX1-209ENST00000554879 TMEM106BQ9NUM4 274 aa13.81□□□□□ -0.2
PCNX1-209ENST00000554879 ADH4P08319 380 aa13.8□□□□□ -0.2
PCNX1-209ENST00000554879 APOBEC3AP31941 199 aaPredicted RBP13.8□□□□□ -0.2
PCNX1-209ENST00000554879 UQCRFS1P47985 274 aa13.8□□□□□ -0.2
PCNX1-209ENST00000554879 HBG1P69891 147 aa13.8□□□□□ -0.2
PCNX1-209ENST00000554879 HBG2P69892 147 aa13.8□□□□□ -0.2
PCNX1-209ENST00000554879 SLC35B1P78383 322 aa13.8□□□□□ -0.2
PCNX1-209ENST00000554879 ZNF146Q15072 292 aa13.8□□□□□ -0.2
PCNX1-209ENST00000554879 OCIAD2Q56VL3 154 aa13.8□□□□□ -0.2
PCNX1-209ENST00000554879 RNASE6Q93091 150 aaKnown RBP13.8□□□□□ -0.2
PCNX1-209ENST00000554879 RSG1Q9BU20 258 aa13.8□□□□□ -0.2
PCNX1-209ENST00000554879 KIAA1549Q9HCM3 1950 aa13.8□□□□□ -0.2
PCNX1-209ENST00000554879 HRASP01112 189 aa13.8□□□□□ -0.2
PCNX1-209ENST00000554879 TCTAP57738 103 aa13.8□□□□□ -0.2
PCNX1-209ENST00000554879 SELENOTP62341 195 aa13.8□□□□□ -0.2
PCNX1-209ENST00000554879 PINX1Q96BK5 328 aaKnown RBP13.8□□□□□ -0.2
PCNX1-209ENST00000554879 A0A1B0GV72 72 aa13.8□□□□□ -0.2
PCNX1-209ENST00000554879 BCL2P10415 239 aa13.8□□□□□ -0.2
PCNX1-209ENST00000554879 DMXL1Q9Y485 3027 aa13.8□□□□□ -0.2
PCNX1-209ENST00000554879 TAS2R30P59541 319 aa13.8□□□□□ -0.2
PCNX1-209ENST00000554879 TCF23Q7RTU1 214 aa13.8□□□□□ -0.2
PCNX1-209ENST00000554879 CD177Q8N6Q3 437 aa13.8□□□□□ -0.2
PCNX1-209ENST00000554879 CST9LQ9H4G1 147 aa13.8□□□□□ -0.2
PCNX1-209ENST00000554879 CA7P43166 264 aa13.79□□□□□ -0.2
PCNX1-209ENST00000554879 IER3P46695 156 aa13.79□□□□□ -0.2
PCNX1-209ENST00000554879 DNLZQ5SXM8 178 aa13.79□□□□□ -0.2
PCNX1-209ENST00000554879 FAM53AQ6NSI3 398 aaPredicted RBP13.79□□□□□ -0.2
PCNX1-209ENST00000554879 CLUHP3Q96NS8 147 aa13.79□□□□□ -0.2
PCNX1-209ENST00000554879 SMDT1Q9H4I9 107 aa13.79□□□□□ -0.2
PCNX1-209ENST00000554879 WFDC1Q9HC57 220 aa13.79□□□□□ -0.2
PCNX1-209ENST00000554879 TRBV6-7A0A0A0MS04 114 aa13.79□□□□□ -0.2
PCNX1-209ENST00000554879 SRRM5B3KS81 715 aa13.79□□□□□ -0.2
PCNX1-209ENST00000554879 PRB3Q04118 309 aaPredicted RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms