RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 MIFP14174 115 aa3.47□□□□□ -1.85
ATXN3-229ENST00000554672 PTBP1P26599 531 aaKnown RBP eCLIP3.47□□□□□ -1.854e-18■■■■■ 40.6
ATXN3-229ENST00000554672 HTR2CP28335 458 aa3.47□□□□□ -1.85
ATXN3-229ENST00000554672 MAS1LP35410 378 aa3.47□□□□□ -1.85
ATXN3-229ENST00000554672 RPS11P62280 158 aaKnown RBP eCLIP3.47□□□□□ -1.85
ATXN3-229ENST00000554672 RPS27AP62979 156 aaKnown RBP3.47□□□□□ -1.85
ATXN3-229ENST00000554672 HLA-DRB3P79483 266 aa3.47□□□□□ -1.85
ATXN3-229ENST00000554672 IRF3Q14653 427 aa3.47□□□□□ -1.85
ATXN3-229ENST00000554672 CDK10Q15131 360 aa3.47□□□□□ -1.85
ATXN3-229ENST00000554672 RBMY1FQ15415 496 aaKnown RBP3.47□□□□□ -1.85
ATXN3-229ENST00000554672 LIPKQ5VXJ0 399 aa3.47□□□□□ -1.85
ATXN3-229ENST00000554672 XAF1Q6GPH4 301 aa3.47□□□□□ -1.85
ATXN3-229ENST00000554672 TMPRSS11AQ6ZMR5 421 aa3.47□□□□□ -1.85
ATXN3-229ENST00000554672 IDO2Q6ZQW0 420 aa3.47□□□□□ -1.85
ATXN3-229ENST00000554672 Q6ZTC4 211 aa3.47□□□□□ -1.85
ATXN3-229ENST00000554672 CEACAM19Q7Z692 300 aa3.47□□□□□ -1.85
ATXN3-229ENST00000554672 CBR4Q8N4T8 237 aa3.47□□□□□ -1.85
ATXN3-229ENST00000554672 PACRGLQ8N7B6 248 aa3.47□□□□□ -1.85
ATXN3-229ENST00000554672 NKAIN3Q8N8D7 197 aa3.47□□□□□ -1.85
ATXN3-229ENST00000554672 Q8NAQ8 132 aa3.47□□□□□ -1.85
ATXN3-229ENST00000554672 OR52I1Q8NGK6 324 aa3.47□□□□□ -1.85
ATXN3-229ENST00000554672 ZNF502Q8TBZ5 544 aa3.47□□□□□ -1.85
ATXN3-229ENST00000554672 PYDC1Q8WXC3 89 aa3.47□□□□□ -1.85
ATXN3-229ENST00000554672 SMIM19Q96E16 107 aa3.47□□□□□ -1.85
ATXN3-229ENST00000554672 SLC29A1Q99808 456 aa3.47□□□□□ -1.85
ATXN3-229ENST00000554672 DCUN1D5Q9BTE7 237 aa3.47□□□□□ -1.85
ATXN3-229ENST00000554672 C9orf16Q9BUW7 83 aa3.47□□□□□ -1.85
ATXN3-229ENST00000554672 TM2D2Q9BX73 214 aa3.47□□□□□ -1.85
ATXN3-229ENST00000554672 TM2D1Q9BX74 207 aa3.47□□□□□ -1.85
ATXN3-229ENST00000554672 ZNF436Q9C0F3 470 aaPredicted RBP3.47□□□□□ -1.85
ATXN3-229ENST00000554672 OR51E2Q9H255 320 aa3.47□□□□□ -1.85
ATXN3-229ENST00000554672 S100A14Q9HCY8 104 aa3.47□□□□□ -1.85
ATXN3-229ENST00000554672 AMBNQ9NP70 447 aa3.47□□□□□ -1.85
ATXN3-229ENST00000554672 FGF20Q9NP95 211 aaPredicted RBP3.47□□□□□ -1.85
ATXN3-229ENST00000554672 HEYLQ9NQ87 328 aaPredicted RBP3.47□□□□□ -1.85
ATXN3-229ENST00000554672 DAZ1Q9NQZ3 744 aaKnown RBP3.47□□□□□ -1.85
ATXN3-229ENST00000554672 AASSQ9UDR5 926 aa3.47□□□□□ -1.85
ATXN3-229ENST00000554672 ORC6Q9Y5N6 252 aa3.47□□□□□ -1.85
ATXN3-229ENST00000554672 IGLV11-55A0A075B6I3 123 aa3.46□□□□□ -1.86
ATXN3-229ENST00000554672 IGLV2-18A0A075B6J9 118 aa3.46□□□□□ -1.86
ATXN3-229ENST00000554672 IGHV4-28A0A0C4DH34 117 aa3.46□□□□□ -1.86
ATXN3-229ENST00000554672 IGHV3-35A0A0C4DH35 117 aa3.46□□□□□ -1.86
ATXN3-229ENST00000554672 IGKV1-6A0A0C4DH72 117 aa3.46□□□□□ -1.86
ATXN3-229ENST00000554672 LOC100130705A0A1B0GUX0 176 aa3.46□□□□□ -1.86
ATXN3-229ENST00000554672 C15orf61A6NNL5 157 aa3.46□□□□□ -1.86
ATXN3-229ENST00000554672 EBAG9O00559 213 aa3.46□□□□□ -1.86
ATXN3-229ENST00000554672 CASQ2O14958 399 aaPredicted RBP3.46□□□□□ -1.86
ATXN3-229ENST00000554672 TGOLN2O43493 480 aa3.46□□□□□ -1.86
ATXN3-229ENST00000554672 WBP4O75554 376 aaKnown RBP3.46□□□□□ -1.86
ATXN3-229ENST00000554672 CD74P04233 296 aa3.46□□□□□ -1.86
ATXN3-229ENST00000554672 ZNF735P0CB33 412 aa3.46□□□□□ -1.86
ATXN3-229ENST00000554672 SAA1P0DJI8 122 aaPredicted RBP3.46□□□□□ -1.86
ATXN3-229ENST00000554672 INAFM2P0DMQ5 153 aa3.46□□□□□ -1.86
ATXN3-229ENST00000554672 RPA2P15927 270 aa3.46□□□□□ -1.86
ATXN3-229ENST00000554672 SRMP19623 302 aa3.46□□□□□ -1.86
ATXN3-229ENST00000554672 NPY1RP25929 384 aa3.46□□□□□ -1.86
ATXN3-229ENST00000554672 DCKP27707 260 aa3.46□□□□□ -1.86
ATXN3-229ENST00000554672 GPR183P32249 361 aa3.46□□□□□ -1.86
ATXN3-229ENST00000554672 DUTP33316 252 aaKnown RBP3.46□□□□□ -1.86
ATXN3-229ENST00000554672 RPL27AP46776 148 aaKnown RBP3.46□□□□□ -1.86
ATXN3-229ENST00000554672 PSMD7P51665 324 aa3.46□□□□□ -1.86
ATXN3-229ENST00000554672 SSX1Q16384 188 aa3.46□□□□□ -1.86
ATXN3-229ENST00000554672 C12orf74Q32Q52 190 aa3.46□□□□□ -1.86
ATXN3-229ENST00000554672 RNF212Q495C1 297 aa3.46□□□□□ -1.86
ATXN3-229ENST00000554672 TMEM41BQ5BJD5 291 aa3.46□□□□□ -1.86
ATXN3-229ENST00000554672 C10orf55Q5SWW7 151 aa3.46□□□□□ -1.86
ATXN3-229ENST00000554672 TTC23Q5W5X9 447 aa3.46□□□□□ -1.86
ATXN3-229ENST00000554672 OR10K2Q6IF99 312 aa3.46□□□□□ -1.86
ATXN3-229ENST00000554672 C19orf35Q6ZS72 473 aa3.46□□□□□ -1.86
ATXN3-229ENST00000554672 SSX9Q7RTT3 188 aa3.46□□□□□ -1.86
ATXN3-229ENST00000554672 UBE2DNLQ8IWF7 75 aa3.46□□□□□ -1.86
ATXN3-229ENST00000554672 OR4A4PQ8NGN8 299 aa3.46□□□□□ -1.86
ATXN3-229ENST00000554672 OR10J5Q8NHC4 309 aa3.46□□□□□ -1.86
ATXN3-229ENST00000554672 VSTM2AQ8TAG5 236 aa3.46□□□□□ -1.86
ATXN3-229ENST00000554672 APH1BQ8WW43 257 aa3.46□□□□□ -1.86
ATXN3-229ENST00000554672 TMEM190Q8WZ59 177 aa3.46□□□□□ -1.86
ATXN3-229ENST00000554672 CHRDL1Q9BU40 450 aa3.46□□□□□ -1.86
ATXN3-229ENST00000554672 TMEM59Q9BXS4 323 aa3.46□□□□□ -1.86
ATXN3-229ENST00000554672 OR2D2Q9H210 308 aa3.46□□□□□ -1.86
ATXN3-229ENST00000554672 SMPD3Q9NY59 655 aaPredicted RBP3.46□□□□□ -1.86
ATXN3-229ENST00000554672 THYN1Q9P016 225 aa3.46□□□□□ -1.86
ATXN3-229ENST00000554672 SMPXQ9UHP9 88 aa3.46□□□□□ -1.86
ATXN3-229ENST00000554672 AK3Q9UIJ7 227 aa3.46□□□□□ -1.86
ATXN3-229ENST00000554672 HSF4Q9ULV5 492 aa3.46□□□□□ -1.86
ATXN3-229ENST00000554672 RBM7Q9Y580 266 aaKnown RBP3.46□□□□□ -1.86
ATXN3-229ENST00000554672 LRP1BQ9NZR2 4599 aa3.46□□□□□ -1.86
ATXN3-229ENST00000554672 PKD1P98161 4303 aa3.46□□□□□ -1.86
ATXN3-229ENST00000554672 TRBV6-7A0A0A0MS04 114 aa3.45□□□□□ -1.86
ATXN3-229ENST00000554672 MFSD2BA6NFX1 497 aa3.45□□□□□ -1.86
ATXN3-229ENST00000554672 SAC3D1A6NKF1 404 aa3.45□□□□□ -1.86
ATXN3-229ENST00000554672 ZNF705EA8MWA4 302 aaPredicted RBP3.45□□□□□ -1.86
ATXN3-229ENST00000554672 EPM2AB3EWF7 344 aa3.45□□□□□ -1.86
ATXN3-229ENST00000554672 E7EUB6 86 aa3.45□□□□□ -1.86
ATXN3-229ENST00000554672 NDUFA4O00483 81 aa3.45□□□□□ -1.86
ATXN3-229ENST00000554672 FABP7O15540 132 aa3.45□□□□□ -1.86
ATXN3-229ENST00000554672 FCGR3BO75015 233 aa3.45□□□□□ -1.86
ATXN3-229ENST00000554672 DFFBO76075 338 aa3.45□□□□□ -1.86
ATXN3-229ENST00000554672 TNFRSF6BO95407 300 aa3.45□□□□□ -1.86
ATXN3-229ENST00000554672 DIRAS3O95661 229 aa3.45□□□□□ -1.86
ATXN3-229ENST00000554672 MBPP02686 304 aaPredicted RBP3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms