RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 TNFSF12O43508 249 aa8.22□□□□□ -1.09
SHMT2-215ENST00000554656 RLN2P04090 185 aa8.22□□□□□ -1.09
SHMT2-215ENST00000554656 IGF1P05019 195 aa8.22□□□□□ -1.09
SHMT2-215ENST00000554656 IL3RAP26951 378 aa8.22□□□□□ -1.09
SHMT2-215ENST00000554656 CNTFRP26992 372 aa8.22□□□□□ -1.09
SHMT2-215ENST00000554656 NKX2-5P52952 324 aaPredicted RBP8.22□□□□□ -1.09
SHMT2-215ENST00000554656 ZNF345Q14585 488 aa8.22□□□□□ -1.09
SHMT2-215ENST00000554656 ZNF585BQ52M93 769 aa8.22□□□□□ -1.09
SHMT2-215ENST00000554656 C9orf66Q5T8R8 295 aa8.22□□□□□ -1.09
SHMT2-215ENST00000554656 THOC7Q6I9Y2 204 aaKnown RBP8.22□□□□□ -1.09
SHMT2-215ENST00000554656 LAMTOR1Q6IAA8 161 aa8.22□□□□□ -1.09
SHMT2-215ENST00000554656 PRSS54Q6PEW0 395 aa8.22□□□□□ -1.09
SHMT2-215ENST00000554656 ODF3L1Q8IXM7 274 aa8.22□□□□□ -1.09
SHMT2-215ENST00000554656 TCTEX1D2Q8WW35 142 aa8.22□□□□□ -1.09
SHMT2-215ENST00000554656 WDR89Q96FK6 387 aaPredicted RBP8.22□□□□□ -1.09
SHMT2-215ENST00000554656 SEC22AQ96IW7 307 aa8.22□□□□□ -1.09
SHMT2-215ENST00000554656 RITA1Q96K30 269 aa8.22□□□□□ -1.09
SHMT2-215ENST00000554656 RASL11BQ9BPW5 248 aa8.22□□□□□ -1.09
SHMT2-215ENST00000554656 ZNF251Q9BRH9 671 aa8.22□□□□□ -1.09
SHMT2-215ENST00000554656 GON7Q9BXV9 100 aa8.22□□□□□ -1.09
SHMT2-215ENST00000554656 KLK15Q9H2R5 256 aa8.22□□□□□ -1.09
SHMT2-215ENST00000554656 GNB4Q9HAV0 340 aa8.22□□□□□ -1.09
SHMT2-215ENST00000554656 COA4Q9NYJ1 87 aa8.22□□□□□ -1.09
SHMT2-215ENST00000554656 PRR13Q9NZ81 148 aa8.22□□□□□ -1.09
SHMT2-215ENST00000554656 ZNF580Q9UK33 172 aa8.22□□□□□ -1.09
SHMT2-215ENST00000554656 U3KQK5 164 aa8.22□□□□□ -1.09
SHMT2-215ENST00000554656 G3V318 75 aa8.21□□□□□ -1.1
SHMT2-215ENST00000554656 TXNL1O43396 289 aa8.21□□□□□ -1.1
SHMT2-215ENST00000554656 RAMP3O60896 148 aa8.21□□□□□ -1.1
SHMT2-215ENST00000554656 PROP1O75360 226 aa8.21□□□□□ -1.1
SHMT2-215ENST00000554656 RRASP10301 218 aa8.21□□□□□ -1.1
SHMT2-215ENST00000554656 PPIFP30405 207 aaKnown RBP8.21□□□□□ -1.1
SHMT2-215ENST00000554656 LPAR6P43657 344 aa8.21□□□□□ -1.1
SHMT2-215ENST00000554656 RPL30P62888 115 aaKnown RBP8.21□□□□□ -1.1
SHMT2-215ENST00000554656 OR2F1Q13607 317 aa8.21□□□□□ -1.1
SHMT2-215ENST00000554656 SMCO1Q147U7 214 aa8.21□□□□□ -1.1
SHMT2-215ENST00000554656 Q5BKY6 102 aa8.21□□□□□ -1.1
SHMT2-215ENST00000554656 ZNF833PQ6ZTB9 187 aa8.21□□□□□ -1.1
SHMT2-215ENST00000554656 ZNF546Q86UE3 836 aa8.21□□□□□ -1.1
SHMT2-215ENST00000554656 SPAG16Q8N0X2 631 aa8.21□□□□□ -1.1
SHMT2-215ENST00000554656 OR8H1Q8NGG4 311 aa8.21□□□□□ -1.1
SHMT2-215ENST00000554656 OR4D5Q8NGN0 318 aa8.21□□□□□ -1.1
SHMT2-215ENST00000554656 DDB2Q92466 427 aa8.21□□□□□ -1.1
SHMT2-215ENST00000554656 RRNAD1Q96FB5 475 aaKnown RBP8.21□□□□□ -1.1
SHMT2-215ENST00000554656 ASCL2Q99929 193 aa8.21□□□□□ -1.1
SHMT2-215ENST00000554656 MRPL20Q9BYC9 149 aaKnown RBP8.21□□□□□ -1.1
SHMT2-215ENST00000554656 PLEKHA2Q9HB19 425 aa8.21□□□□□ -1.1
SHMT2-215ENST00000554656 FXYD6-FXYD2A0A087WZ82 144 aa8.2□□□□□ -1.1
SHMT2-215ENST00000554656 SAA2-SAA4A0A096LPE2 208 aa8.2□□□□□ -1.1
SHMT2-215ENST00000554656 A0A0D9SG52 128 aa8.2□□□□□ -1.1
SHMT2-215ENST00000554656 LINC00473A8K010 186 aa8.2□□□□□ -1.1
SHMT2-215ENST00000554656 MPTX1A8MV57 137 aa8.2□□□□□ -1.1
SHMT2-215ENST00000554656 FAM90A26D6RGX4 464 aa8.2□□□□□ -1.1
SHMT2-215ENST00000554656 I3L521 148 aa8.2□□□□□ -1.1
SHMT2-215ENST00000554656 L7N2F9 121 aa8.2□□□□□ -1.1
SHMT2-215ENST00000554656 M0R1X1 148 aa8.2□□□□□ -1.1
SHMT2-215ENST00000554656 ATP6V0E1O15342 81 aa8.2□□□□□ -1.1
SHMT2-215ENST00000554656 HPRT1P00492 218 aa8.2□□□□□ -1.1
SHMT2-215ENST00000554656 IGKV1-39P01597 117 aa8.2□□□□□ -1.1
SHMT2-215ENST00000554656 IGKV1D-39P04432 117 aa8.2□□□□□ -1.1
SHMT2-215ENST00000554656 NHLRC4P0CG21 123 aaPredicted RBP8.2□□□□□ -1.1
SHMT2-215ENST00000554656 SAA2P0DJI9 122 aaPredicted RBP8.2□□□□□ -1.1
SHMT2-215ENST00000554656 GNB1P62873 340 aa8.2□□□□□ -1.1
SHMT2-215ENST00000554656 NDPQ00604 133 aa8.2□□□□□ -1.1
SHMT2-215ENST00000554656 MMDQ15546 238 aa8.2□□□□□ -1.1
SHMT2-215ENST00000554656 LGALSLQ3ZCW2 172 aaPredicted RBP8.2□□□□□ -1.1
SHMT2-215ENST00000554656 ACOT7LQ6ZUV0 252 aa8.2□□□□□ -1.1
SHMT2-215ENST00000554656 OR4S2Q8NH73 311 aa8.2□□□□□ -1.1
SHMT2-215ENST00000554656 GPHA2Q96T91 129 aa8.2□□□□□ -1.1
SHMT2-215ENST00000554656 NABP2Q9BQ15 211 aa8.2□□□□□ -1.1
SHMT2-215ENST00000554656 AIFM2Q9BRQ8 373 aa8.2□□□□□ -1.1
SHMT2-215ENST00000554656 SLA2Q9H6Q3 261 aa8.2□□□□□ -1.1
SHMT2-215ENST00000554656 CACFD1Q9UGQ2 172 aa8.2□□□□□ -1.1
SHMT2-215ENST00000554656 TNFSF18Q9UNG2 199 aa8.2□□□□□ -1.1
SHMT2-215ENST00000554656 HSPB11Q9Y547 144 aa8.2□□□□□ -1.1
SHMT2-215ENST00000554656 WSB1Q9Y6I7 421 aa8.2□□□□□ -1.1
SHMT2-215ENST00000554656 HUWE1Q7Z6Z7 4374 aaKnown RBP8.19□□□□□ -1.1
SHMT2-215ENST00000554656 IGHV7-81A0A0B4J1V7 117 aa8.19□□□□□ -1.1
SHMT2-215ENST00000554656 E5RGE8 158 aa8.19□□□□□ -1.1
SHMT2-215ENST00000554656 RGS13O14921 159 aa8.19□□□□□ -1.1
SHMT2-215ENST00000554656 ST8SIA3O43173 380 aa8.19□□□□□ -1.1
SHMT2-215ENST00000554656 PITX3O75364 302 aa8.19□□□□□ -1.1
SHMT2-215ENST00000554656 IGLV1-40P01703 118 aa8.19□□□□□ -1.1
SHMT2-215ENST00000554656 P0C879 139 aa8.19□□□□□ -1.1
SHMT2-215ENST00000554656 S100A11P31949 105 aa8.19□□□□□ -1.1
SHMT2-215ENST00000554656 NUP62P37198 522 aaPredicted RBP8.19□□□□□ -1.1
SHMT2-215ENST00000554656 NKX2-1P43699 371 aaPredicted RBP8.19□□□□□ -1.1
SHMT2-215ENST00000554656 AKR1C2P52895 323 aa8.19□□□□□ -1.1
SHMT2-215ENST00000554656 RUNX1Q01196 453 aa8.19□□□□□ -1.1
SHMT2-215ENST00000554656 RAB32Q13637 225 aa8.19□□□□□ -1.1
SHMT2-215ENST00000554656 POU2AF1Q16633 256 aa8.19□□□□□ -1.1
SHMT2-215ENST00000554656 RPL39P5Q59GN2 51 aa8.19□□□□□ -1.1
SHMT2-215ENST00000554656 C19orf54Q5BKX5 351 aa8.19□□□□□ -1.1
SHMT2-215ENST00000554656 KCNRGQ8N5I3 272 aa8.19□□□□□ -1.1
SHMT2-215ENST00000554656 ZNF491Q8N8L2 437 aa8.19□□□□□ -1.1
SHMT2-215ENST00000554656 INO80EQ8NBZ0 244 aaPredicted RBP8.19□□□□□ -1.1
SHMT2-215ENST00000554656 OR11H1Q8NG94 326 aa8.19□□□□□ -1.1
SHMT2-215ENST00000554656 RNASE11Q8TAA1 199 aaKnown RBP8.19□□□□□ -1.1
SHMT2-215ENST00000554656 OR5B12Q96R08 314 aa8.19□□□□□ -1.1
SHMT2-215ENST00000554656 RNF126Q9BV68 326 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms