RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 CTRB2Q6GPI1 263 aa8.16□□□□□ -1.1
SHMT2-213ENST00000554600 THOC7Q6I9Y2 204 aaKnown RBP8.16□□□□□ -1.1
SHMT2-213ENST00000554600 FAAP20Q6NZ36 180 aa8.16□□□□□ -1.1
SHMT2-213ENST00000554600 CLEC19AQ6UXS0 136 aa8.16□□□□□ -1.1
SHMT2-213ENST00000554600 H2BFWTQ7Z2G1 175 aa8.16□□□□□ -1.1
SHMT2-213ENST00000554600 CCDC71LQ8N9Z2 235 aa8.16□□□□□ -1.1
SHMT2-213ENST00000554600 OR4A16Q8NH70 328 aa8.16□□□□□ -1.1
SHMT2-213ENST00000554600 ZFAND1Q8TCF1 268 aa8.16□□□□□ -1.1
SHMT2-213ENST00000554600 SMIM4Q8WVI0 70 aa8.16□□□□□ -1.1
SHMT2-213ENST00000554600 EEF1AKMT3Q96AZ1 226 aa8.16□□□□□ -1.1
SHMT2-213ENST00000554600 ZNF486Q96H40 463 aaPredicted RBP8.16□□□□□ -1.1
SHMT2-213ENST00000554600 FANCD2OSQ96PS1 177 aa8.16□□□□□ -1.1
SHMT2-213ENST00000554600 TSC22D3Q99576 134 aa8.16□□□□□ -1.1
SHMT2-213ENST00000554600 SLIRPQ9GZT3 109 aaKnown RBP8.16□□□□□ -1.1
SHMT2-213ENST00000554600 PEMTQ9UBM1 199 aa8.16□□□□□ -1.1
SHMT2-213ENST00000554600 PRNDQ9UKY0 176 aa8.16□□□□□ -1.1
SHMT2-213ENST00000554600 COL7A1Q02388 2944 aa8.16□□□□□ -1.1
SHMT2-213ENST00000554600 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.15□□□□□ -1.1
SHMT2-213ENST00000554600 DISC1C4P0D8 188 aa8.15□□□□□ -1.1
SHMT2-213ENST00000554600 GGCTO75223 188 aaKnown RBP8.15□□□□□ -1.1
SHMT2-213ENST00000554600 HLA-AP01891 365 aaKnown RBP8.15□□□□□ -1.1
SHMT2-213ENST00000554600 CD74P04233 296 aa8.15□□□□□ -1.1
SHMT2-213ENST00000554600 AKAIN1P0CW23 69 aa8.15□□□□□ -1.1
SHMT2-213ENST00000554600 GP9P14770 177 aa8.15□□□□□ -1.1
SHMT2-213ENST00000554600 ARL3P36405 182 aa8.15□□□□□ -1.1
SHMT2-213ENST00000554600 AKR1C2P52895 323 aa8.15□□□□□ -1.1
SHMT2-213ENST00000554600 SLC25A24Q6NUK1 477 aa8.15□□□□□ -1.1
SHMT2-213ENST00000554600 LHFPL1Q86WI0 220 aa8.15□□□□□ -1.1
SHMT2-213ENST00000554600 OR13C8Q8NGS7 320 aa8.15□□□□□ -1.1
SHMT2-213ENST00000554600 TERB2Q8NHR7 220 aa8.15□□□□□ -1.1
SHMT2-213ENST00000554600 RNASE11Q8TAA1 199 aaKnown RBP8.15□□□□□ -1.1
SHMT2-213ENST00000554600 MARCH1Q8TCQ1 289 aa8.15□□□□□ -1.1
SHMT2-213ENST00000554600 MRGPRFQ96AM1 343 aa8.15□□□□□ -1.1
SHMT2-213ENST00000554600 B9D2Q9BPU9 175 aa8.15□□□□□ -1.1
SHMT2-213ENST00000554600 SRSF8Q9BRL6 282 aaKnown RBP8.15□□□□□ -1.1
SHMT2-213ENST00000554600 NXF2Q9GZY0 626 aaKnown RBP8.15□□□□□ -1.1
SHMT2-213ENST00000554600 RBM38Q9H0Z9 239 aaKnown RBP8.15□□□□□ -1.1
SHMT2-213ENST00000554600 FKBP11Q9NYL4 201 aa8.15□□□□□ -1.1
SHMT2-213ENST00000554600 THYN1Q9P016 225 aa8.15□□□□□ -1.1
SHMT2-213ENST00000554600 C14orf166Q9Y224 244 aaKnown RBP8.15□□□□□ -1.1
SHMT2-213ENST00000554600 SMAD5-AS1Q9Y6J3 95 aa8.15□□□□□ -1.1
SHMT2-213ENST00000554600 IGLV11-55A0A075B6I3 123 aa8.14□□□□□ -1.11
SHMT2-213ENST00000554600 FABP12A6NFH5 140 aa8.14□□□□□ -1.11
SHMT2-213ENST00000554600 MFSD2BA6NFX1 497 aa8.14□□□□□ -1.11
SHMT2-213ENST00000554600 C15orf61A6NNL5 157 aa8.14□□□□□ -1.11
SHMT2-213ENST00000554600 H0Y980 276 aa8.14□□□□□ -1.11
SHMT2-213ENST00000554600 OR2C1O95371 312 aa8.14□□□□□ -1.11
SHMT2-213ENST00000554600 IGLV1-51P01701 117 aa8.14□□□□□ -1.11
SHMT2-213ENST00000554600 TNFSF8P32971 234 aa8.14□□□□□ -1.11
SHMT2-213ENST00000554600 RND3P61587 244 aa8.14□□□□□ -1.11
SHMT2-213ENST00000554600 WT1-ASQ06250 92 aa8.14□□□□□ -1.11
SHMT2-213ENST00000554600 TRIM16LQ309B1 348 aa8.14□□□□□ -1.11
SHMT2-213ENST00000554600 HSD17B13Q7Z5P4 300 aaPredicted RBP8.14□□□□□ -1.11
SHMT2-213ENST00000554600 GDPD1Q8N9F7 314 aa8.14□□□□□ -1.11
SHMT2-213ENST00000554600 OR4C16Q8NGL9 310 aa8.14□□□□□ -1.11
SHMT2-213ENST00000554600 DYNLRB2Q8TF09 96 aa8.14□□□□□ -1.11
SHMT2-213ENST00000554600 LSM10Q969L4 123 aaKnown RBP8.14□□□□□ -1.11
SHMT2-213ENST00000554600 SEC22AQ96IW7 307 aa8.14□□□□□ -1.11
SHMT2-213ENST00000554600 CXorf58Q96LI9 332 aa8.14□□□□□ -1.11
SHMT2-213ENST00000554600 CCDC140Q96MF4 163 aa8.14□□□□□ -1.11
SHMT2-213ENST00000554600 TMEM56Q96MV1 263 aa8.14□□□□□ -1.11
SHMT2-213ENST00000554600 ZC4H2Q9NQZ6 224 aa8.14□□□□□ -1.11
SHMT2-213ENST00000554600 FAM212BQ9NTI7 297 aaPredicted RBP8.14□□□□□ -1.11
SHMT2-213ENST00000554600 LSM4Q9Y4Z0 139 aaKnown RBP8.14□□□□□ -1.11
SHMT2-213ENST00000554600 TRBV7-1A0A0A6YYK4 115 aa8.13□□□□□ -1.11
SHMT2-213ENST00000554600 IGHV3-21A0A0B4J1V1 117 aa8.13□□□□□ -1.11
SHMT2-213ENST00000554600 TEX13DA0A0J9YY54 714 aaPredicted RBP8.13□□□□□ -1.11
SHMT2-213ENST00000554600 C3orf85A0A1B0GTC6 90 aa8.13□□□□□ -1.11
SHMT2-213ENST00000554600 ZNF320A2RRD8 509 aa8.13□□□□□ -1.11
SHMT2-213ENST00000554600 CTDSPLO15194 276 aa8.13□□□□□ -1.11
SHMT2-213ENST00000554600 ATG12O94817 140 aa8.13□□□□□ -1.11
SHMT2-213ENST00000554600 IGKV1-39P01597 117 aa8.13□□□□□ -1.11
SHMT2-213ENST00000554600 IGKV1D-39P04432 117 aa8.13□□□□□ -1.11
SHMT2-213ENST00000554600 CTSDP07339 412 aaPredicted RBP8.13□□□□□ -1.11
SHMT2-213ENST00000554600 CSN3P07498 182 aa8.13□□□□□ -1.11
SHMT2-213ENST00000554600 FGF2P09038 288 aa8.13□□□□□ -1.11
SHMT2-213ENST00000554600 GPR183P32249 361 aa8.13□□□□□ -1.11
SHMT2-213ENST00000554600 S100A5P33763 92 aa8.13□□□□□ -1.11
SHMT2-213ENST00000554600 SP6Q3SY56 376 aa8.13□□□□□ -1.11
SHMT2-213ENST00000554600 FAM106AQ4KMX7 169 aa8.13□□□□□ -1.11
SHMT2-213ENST00000554600 C11orf87Q6NUJ2 197 aa8.13□□□□□ -1.11
SHMT2-213ENST00000554600 OR5B3Q8NH48 314 aa8.13□□□□□ -1.11
SHMT2-213ENST00000554600 TP53RKQ96S44 253 aa8.13□□□□□ -1.11
SHMT2-213ENST00000554600 ASCL2Q99929 193 aa8.13□□□□□ -1.11
SHMT2-213ENST00000554600 NDUFA4L2Q9NRX3 87 aa8.13□□□□□ -1.11
SHMT2-213ENST00000554600 TMEM14BQ9NUH8 114 aa8.13□□□□□ -1.11
SHMT2-213ENST00000554600 MCUBQ9NWR8 336 aa8.13□□□□□ -1.11
SHMT2-213ENST00000554600 NDUFA13Q9P0J0 144 aa8.13□□□□□ -1.11
SHMT2-213ENST00000554600 DBX1A6NMT0 343 aa8.12□□□□□ -1.11
SHMT2-213ENST00000554600 CLEC3BP05452 202 aa8.12□□□□□ -1.11
SHMT2-213ENST00000554600 PTBP1P26599 531 aaKnown RBP eCLIP8.12□□□□□ -1.11
SHMT2-213ENST00000554600 IZUMO4Q1ZYL8 232 aa8.12□□□□□ -1.11
SHMT2-213ENST00000554600 PYDC2Q56P42 97 aa8.12□□□□□ -1.11
SHMT2-213ENST00000554600 SPINK9Q5DT21 86 aa8.12□□□□□ -1.11
SHMT2-213ENST00000554600 LCN12Q6JVE5 192 aa8.12□□□□□ -1.11
SHMT2-213ENST00000554600 PLET1Q6UQ28 207 aa8.12□□□□□ -1.11
SHMT2-213ENST00000554600 IL34Q6ZMJ4 242 aa8.12□□□□□ -1.11
SHMT2-213ENST00000554600 CADM3Q8N126 398 aa8.12□□□□□ -1.11
SHMT2-213ENST00000554600 OR51S1Q8NGJ8 323 aa8.12□□□□□ -1.11
SHMT2-213ENST00000554600 RRNAD1Q96FB5 475 aaKnown RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms