RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 ZFAND1Q8TCF1 268 aa6.68□□□□□ -1.34
ACTN1-213ENST00000554508 DEDD2Q8WXF8 326 aa6.68□□□□□ -1.34
ACTN1-213ENST00000554508 FYTTD1Q96QD9 318 aaKnown RBP6.68□□□□□ -1.34
ACTN1-213ENST00000554508 PLEKHA2Q9HB19 425 aa6.68□□□□□ -1.34
ACTN1-213ENST00000554508 SLC2A8Q9NY64 477 aa6.68□□□□□ -1.34
ACTN1-213ENST00000554508 SIGLEC8Q9NYZ4 499 aa6.68□□□□□ -1.34
ACTN1-213ENST00000554508 PEMTQ9UBM1 199 aa6.68□□□□□ -1.34
ACTN1-213ENST00000554508 C14orf166Q9Y224 244 aaKnown RBP6.68□□□□□ -1.34
ACTN1-213ENST00000554508 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.67□□□□□ -1.34
ACTN1-213ENST00000554508 NAP1L6A6NFF2 107 aa6.67□□□□□ -1.34
ACTN1-213ENST00000554508 HMX3A6NHT5 357 aa6.67□□□□□ -1.34
ACTN1-213ENST00000554508 TEX22C9J3V5 150 aa6.67□□□□□ -1.34
ACTN1-213ENST00000554508 H0Y980 276 aa6.67□□□□□ -1.34
ACTN1-213ENST00000554508 RBMXL2O75526 392 aaKnown RBP6.67□□□□□ -1.34
ACTN1-213ENST00000554508 PRH1P02810 166 aa6.67□□□□□ -1.34
ACTN1-213ENST00000554508 CRYGCP07315 174 aa6.67□□□□□ -1.34
ACTN1-213ENST00000554508 HIST1H1BP16401 226 aaKnown RBP6.67□□□□□ -1.34
ACTN1-213ENST00000554508 HLA-GP17693 338 aa6.67□□□□□ -1.34
ACTN1-213ENST00000554508 PSMB6P28072 239 aa6.67□□□□□ -1.34
ACTN1-213ENST00000554508 PIGPP57054 158 aa6.67□□□□□ -1.34
ACTN1-213ENST00000554508 SYNJ2BPP57105 145 aa6.67□□□□□ -1.34
ACTN1-213ENST00000554508 DEFA5Q01523 94 aa6.67□□□□□ -1.34
ACTN1-213ENST00000554508 EXOSC2Q13868 293 aaKnown RBP6.67□□□□□ -1.34
ACTN1-213ENST00000554508 SURF2Q15527 256 aaPredicted RBP6.67□□□□□ -1.34
ACTN1-213ENST00000554508 KLK9Q2XQG4 91 aa6.67□□□□□ -1.34
ACTN1-213ENST00000554508 C10orf55Q5SWW7 151 aa6.67□□□□□ -1.34
ACTN1-213ENST00000554508 TBC1D26Q86UD7 250 aa6.67□□□□□ -1.34
ACTN1-213ENST00000554508 CADM3Q8N126 398 aa6.67□□□□□ -1.34
ACTN1-213ENST00000554508 CCDC71LQ8N9Z2 235 aa6.67□□□□□ -1.34
ACTN1-213ENST00000554508 MRGPRFQ96AM1 343 aa6.67□□□□□ -1.34
ACTN1-213ENST00000554508 ZNF486Q96H40 463 aaPredicted RBP6.67□□□□□ -1.34
ACTN1-213ENST00000554508 WWC2-AS2Q96NR7 200 aa6.67□□□□□ -1.34
ACTN1-213ENST00000554508 SCGB3A2Q96PL1 93 aa6.67□□□□□ -1.34
ACTN1-213ENST00000554508 COMMD9Q9P000 198 aa6.67□□□□□ -1.34
ACTN1-213ENST00000554508 COPZ2Q9P299 210 aa6.67□□□□□ -1.34
ACTN1-213ENST00000554508 KLK9Q9UKQ9 250 aa6.67□□□□□ -1.34
ACTN1-213ENST00000554508 E7EUB6 86 aa6.66□□□□□ -1.34
ACTN1-213ENST00000554508 UPK2O00526 184 aa6.66□□□□□ -1.34
ACTN1-213ENST00000554508 OR2J3O76001 311 aa6.66□□□□□ -1.34
ACTN1-213ENST00000554508 TRBV12-3P01733 135 aa6.66□□□□□ -1.34
ACTN1-213ENST00000554508 CTSDP07339 412 aaPredicted RBP6.66□□□□□ -1.34
ACTN1-213ENST00000554508 CTRB1P17538 263 aa6.66□□□□□ -1.34
ACTN1-213ENST00000554508 F2RP25116 425 aa6.66□□□□□ -1.34
ACTN1-213ENST00000554508 CCR6P51684 374 aa6.66□□□□□ -1.34
ACTN1-213ENST00000554508 C15orf32Q32M92 178 aa6.66□□□□□ -1.34
ACTN1-213ENST00000554508 CTRB2Q6GPI1 263 aa6.66□□□□□ -1.34
ACTN1-213ENST00000554508 THOC7Q6I9Y2 204 aaKnown RBP6.66□□□□□ -1.34
ACTN1-213ENST00000554508 IL34Q6ZMJ4 242 aa6.66□□□□□ -1.34
ACTN1-213ENST00000554508 DMBX1Q8NFW5 382 aa6.66□□□□□ -1.34
ACTN1-213ENST00000554508 C7orf50Q9BRJ6 194 aaKnown RBP6.66□□□□□ -1.34
ACTN1-213ENST00000554508 SRSF8Q9BRL6 282 aaKnown RBP6.66□□□□□ -1.34
ACTN1-213ENST00000554508 COMMD5Q9GZQ3 224 aa6.66□□□□□ -1.34
ACTN1-213ENST00000554508 FBXL7Q9UJT9 491 aa6.66□□□□□ -1.34
ACTN1-213ENST00000554508 U3KQK5 164 aa6.66□□□□□ -1.34
ACTN1-213ENST00000554508 TEX13DA0A0J9YY54 714 aaPredicted RBP6.65□□□□□ -1.34
ACTN1-213ENST00000554508 C3orf85A0A1B0GTC6 90 aa6.65□□□□□ -1.34
ACTN1-213ENST00000554508 A0A1B0GW64 132 aa6.65□□□□□ -1.34
ACTN1-213ENST00000554508 BMPR1BO00238 502 aa6.65□□□□□ -1.34
ACTN1-213ENST00000554508 PLA2G10O15496 165 aa6.65□□□□□ -1.34
ACTN1-213ENST00000554508 LYRM1O43325 122 aa6.65□□□□□ -1.34
ACTN1-213ENST00000554508 GGCTO75223 188 aaKnown RBP6.65□□□□□ -1.34
ACTN1-213ENST00000554508 UPK1BO75841 260 aa6.65□□□□□ -1.34
ACTN1-213ENST00000554508 CSN3P07498 182 aa6.65□□□□□ -1.34
ACTN1-213ENST00000554508 DEFA4P12838 97 aa6.65□□□□□ -1.34
ACTN1-213ENST00000554508 AKR1C4P17516 323 aa6.65□□□□□ -1.34
ACTN1-213ENST00000554508 LPAR6P43657 344 aa6.65□□□□□ -1.34
ACTN1-213ENST00000554508 OR2B8PP59922 312 aa6.65□□□□□ -1.34
ACTN1-213ENST00000554508 ERVK-16P61578 105 aa6.65□□□□□ -1.34
ACTN1-213ENST00000554508 RND3P61587 244 aa6.65□□□□□ -1.34
ACTN1-213ENST00000554508 TMED4Q7Z7H5 227 aa6.65□□□□□ -1.34
ACTN1-213ENST00000554508 OR2K2Q8NGT1 345 aa6.65□□□□□ -1.34
ACTN1-213ENST00000554508 FANCD2OSQ96PS1 177 aa6.65□□□□□ -1.34
ACTN1-213ENST00000554508 ASCL2Q99929 193 aa6.65□□□□□ -1.34
ACTN1-213ENST00000554508 SLC25A21Q9BQT8 299 aaPredicted RBP6.65□□□□□ -1.34
ACTN1-213ENST00000554508 RTBDNQ9BSG5 229 aaPredicted RBP6.65□□□□□ -1.34
ACTN1-213ENST00000554508 C5orf66Q9H5L9 145 aa6.65□□□□□ -1.34
ACTN1-213ENST00000554508 FAM212BQ9NTI7 297 aaPredicted RBP6.65□□□□□ -1.34
ACTN1-213ENST00000554508 TMEM140Q9NV12 185 aa6.65□□□□□ -1.34
ACTN1-213ENST00000554508 GPR132Q9UNW8 380 aa6.65□□□□□ -1.34
ACTN1-213ENST00000554508 IGLV11-55A0A075B6I3 123 aa6.64□□□□□ -1.35
ACTN1-213ENST00000554508 TRBV7-1A0A0A6YYK4 115 aa6.64□□□□□ -1.35
ACTN1-213ENST00000554508 TRAV3A0A0B4J244 114 aa6.64□□□□□ -1.35
ACTN1-213ENST00000554508 CGB1A6NKQ9 187 aa6.64□□□□□ -1.35
ACTN1-213ENST00000554508 MARCH11A6NNE9 402 aa6.64□□□□□ -1.35
ACTN1-213ENST00000554508 A8MZ25 164 aa6.64□□□□□ -1.35
ACTN1-213ENST00000554508 CYB5BO43169 146 aa6.64□□□□□ -1.35
ACTN1-213ENST00000554508 S1PR2O95136 353 aa6.64□□□□□ -1.35
ACTN1-213ENST00000554508 NDUFB8O95169 186 aa6.64□□□□□ -1.35
ACTN1-213ENST00000554508 SERPINE2P07093 398 aa6.64□□□□□ -1.35
ACTN1-213ENST00000554508 TRAPPC2P0DI81 140 aa6.64□□□□□ -1.35
ACTN1-213ENST00000554508 TRAPPC2BP0DI82 140 aa6.64□□□□□ -1.35
ACTN1-213ENST00000554508 MYOD1P15172 320 aa6.64□□□□□ -1.35
ACTN1-213ENST00000554508 AREGP15514 252 aa6.64□□□□□ -1.35
ACTN1-213ENST00000554508 RPA2P15927 270 aa6.64□□□□□ -1.35
ACTN1-213ENST00000554508 MECP2P51608 486 aaKnown RBP6.64□□□□□ -1.35
ACTN1-213ENST00000554508 RBMS2Q15434 407 aaKnown RBP6.64□□□□□ -1.35
ACTN1-213ENST00000554508 SP6Q3SY56 376 aa6.64□□□□□ -1.35
ACTN1-213ENST00000554508 LCN12Q6JVE5 192 aa6.64□□□□□ -1.35
ACTN1-213ENST00000554508 MZT2BQ6NZ67 158 aa6.64□□□□□ -1.35
ACTN1-213ENST00000554508 HSD17B13Q7Z5P4 300 aaPredicted RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms