RNA–Protein interactions for RNA: ENST00000554302.1

RCCD1-202, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-202ENST00000554302 ALMS1Q8TCU4 4167 aa16.34■□□□□ 0.21
RCCD1-202ENST00000554302 TRAV25A0A0B4J276 109 aa16.34■□□□□ 0.21
RCCD1-202ENST00000554302 GPR183P32249 361 aa16.34■□□□□ 0.21
RCCD1-202ENST00000554302 THOC7Q6I9Y2 204 aaKnown RBP16.34■□□□□ 0.21
RCCD1-202ENST00000554302 BTNL8Q6UX41 500 aa16.34■□□□□ 0.21
RCCD1-202ENST00000554302 TMEM17Q86X19 198 aa16.34■□□□□ 0.21
RCCD1-202ENST00000554302 CADM3Q8N126 398 aa16.34■□□□□ 0.21
RCCD1-202ENST00000554302 OR10W1Q8NGF6 305 aa16.34■□□□□ 0.21
RCCD1-202ENST00000554302 OR52B4Q8NGK2 314 aa16.34■□□□□ 0.21
RCCD1-202ENST00000554302 OR51H1Q8NH63 302 aa16.34■□□□□ 0.21
RCCD1-202ENST00000554302 BORCS5Q969J3 196 aa16.34■□□□□ 0.21
RCCD1-202ENST00000554302 QTRT1Q9BXR0 403 aaKnown RBP16.34■□□□□ 0.21
RCCD1-202ENST00000554302 ZNF436Q9C0F3 470 aaPredicted RBP16.34■□□□□ 0.21
RCCD1-202ENST00000554302 THYN1Q9P016 225 aa16.34■□□□□ 0.21
RCCD1-202ENST00000554302 MRPL27Q9P0M9 148 aaKnown RBP16.34■□□□□ 0.21
RCCD1-202ENST00000554302 MEIS3P1A6NDR6 274 aa16.33■□□□□ 0.2
RCCD1-202ENST00000554302 WT1-ASQ06250 92 aa16.33■□□□□ 0.2
RCCD1-202ENST00000554302 NEDD8Q15843 81 aa16.33■□□□□ 0.2
RCCD1-202ENST00000554302 ANKRD55Q3KP44 614 aa16.33■□□□□ 0.2
RCCD1-202ENST00000554302 AADACL3Q5VUY0 350 aa16.33■□□□□ 0.2
RCCD1-202ENST00000554302 GDPD1Q8N9F7 314 aa16.33■□□□□ 0.2
RCCD1-202ENST00000554302 DMBX1Q8NFW5 382 aa16.33■□□□□ 0.2
RCCD1-202ENST00000554302 VN1R17PQ8TDU5 208 aa16.33■□□□□ 0.2
RCCD1-202ENST00000554302 TEX50A0A1B0GTY4 177 aa16.32■□□□□ 0.2
RCCD1-202ENST00000554302 LCE2BO14633 110 aa16.32■□□□□ 0.2
RCCD1-202ENST00000554302 TGOLN2O43493 480 aa16.32■□□□□ 0.2
RCCD1-202ENST00000554302 SCAF4O95104 1147 aaKnown RBP16.32■□□□□ 0.2
RCCD1-202ENST00000554302 KCTD21Q4G0X4 260 aa16.32■□□□□ 0.2
RCCD1-202ENST00000554302 PLET1Q6UQ28 207 aa16.32■□□□□ 0.2
RCCD1-202ENST00000554302 HSD17B13Q7Z5P4 300 aaPredicted RBP16.32■□□□□ 0.2
RCCD1-202ENST00000554302 CROCCP3Q8IVE0 287 aa16.32■□□□□ 0.2
RCCD1-202ENST00000554302 MOB3AQ96BX8 217 aa16.32■□□□□ 0.2
RCCD1-202ENST00000554302 S100A16Q96FQ6 103 aaKnown RBP16.32■□□□□ 0.2
RCCD1-202ENST00000554302 GGTLC1Q9BX51 225 aa16.32■□□□□ 0.2
RCCD1-202ENST00000554302 UFC1Q9Y3C8 167 aa16.32■□□□□ 0.2
RCCD1-202ENST00000554302 MARCH11A6NNE9 402 aa16.31■□□□□ 0.2
RCCD1-202ENST00000554302 SERPINE2P07093 398 aa16.31■□□□□ 0.2
RCCD1-202ENST00000554302 TRAPPC2P0DI81 140 aa16.31■□□□□ 0.2
RCCD1-202ENST00000554302 TRAPPC2BP0DI82 140 aa16.31■□□□□ 0.2
RCCD1-202ENST00000554302 NAT1P18440 290 aa16.31■□□□□ 0.2
RCCD1-202ENST00000554302 F2RP25116 425 aa16.31■□□□□ 0.2
RCCD1-202ENST00000554302 RFX2P48378 723 aa16.31■□□□□ 0.2
RCCD1-202ENST00000554302 HERV-K104P61576 105 aa16.31■□□□□ 0.2
RCCD1-202ENST00000554302 ZNF585BQ52M93 769 aa16.31■□□□□ 0.2
RCCD1-202ENST00000554302 ATP6V0BQ99437 205 aa16.31■□□□□ 0.2
RCCD1-202ENST00000554302 IFT46Q9NQC8 304 aa16.31■□□□□ 0.2
RCCD1-202ENST00000554302 NDUFA4L2Q9NRX3 87 aa16.31■□□□□ 0.2
RCCD1-202ENST00000554302 EHFQ9NZC4 300 aa16.31■□□□□ 0.2
RCCD1-202ENST00000554302 LOC102724200A0A096LPH7 203 aaPredicted RBP16.3■□□□□ 0.2
RCCD1-202ENST00000554302 PGLYRP1O75594 196 aaPredicted RBP16.3■□□□□ 0.2
RCCD1-202ENST00000554302 JTBO76095 146 aa16.3■□□□□ 0.2
RCCD1-202ENST00000554302 TGFBR1P36897 503 aa16.3■□□□□ 0.2
RCCD1-202ENST00000554302 UBE2NLQ5JXB2 153 aa16.3■□□□□ 0.2
RCCD1-202ENST00000554302 TMEM190Q8WZ59 177 aa16.3■□□□□ 0.2
RCCD1-202ENST00000554302 OVOL2Q9BRP0 275 aa16.3■□□□□ 0.2
RCCD1-202ENST00000554302 C5orf66Q9H5L9 145 aa16.3■□□□□ 0.2
RCCD1-202ENST00000554302 IGHV3-35A0A0C4DH35 117 aa16.29■□□□□ 0.2
RCCD1-202ENST00000554302 CYB5BO43169 146 aa16.29■□□□□ 0.2
RCCD1-202ENST00000554302 RLN1P04808 185 aa16.29■□□□□ 0.2
RCCD1-202ENST00000554302 OR13C7P0DN81 318 aa16.29■□□□□ 0.2
RCCD1-202ENST00000554302 RPA2P15927 270 aa16.29■□□□□ 0.2
RCCD1-202ENST00000554302 MFAP2P55001 183 aa16.29■□□□□ 0.2
RCCD1-202ENST00000554302 RBPMS2Q6ZRY4 209 aaKnown RBP16.29■□□□□ 0.2
RCCD1-202ENST00000554302 OR1L6Q8NGR2 347 aa16.29■□□□□ 0.2
RCCD1-202ENST00000554302 OR1L8Q8NGR8 309 aa16.29■□□□□ 0.2
RCCD1-202ENST00000554302 ZNF2Q9BSG1 426 aaPredicted RBP16.29■□□□□ 0.2
RCCD1-202ENST00000554302 F8W735 103 aaPredicted RBP16.28■□□□□ 0.2
RCCD1-202ENST00000554302 RPS19P39019 145 aaKnown RBP16.28■□□□□ 0.2
RCCD1-202ENST00000554302 TAS2R20P59543 309 aa16.28■□□□□ 0.2
RCCD1-202ENST00000554302 FCAMRQ8WWV6 532 aa16.28■□□□□ 0.2
RCCD1-202ENST00000554302 DGCR14Q96DF8 476 aaKnown RBP16.28■□□□□ 0.2
RCCD1-202ENST00000554302 BSCL2Q96G97 398 aaPredicted RBP16.28■□□□□ 0.2
RCCD1-202ENST00000554302 SPAG8Q99932 426 aaPredicted RBP16.28■□□□□ 0.2
RCCD1-202ENST00000554302 FXYD6Q9H0Q3 95 aa16.28■□□□□ 0.2
RCCD1-202ENST00000554302 F11RQ9Y624 299 aaKnown RBP16.28■□□□□ 0.2
RCCD1-202ENST00000554302 TSPAN4O14817 238 aa16.27■□□□□ 0.2
RCCD1-202ENST00000554302 PMP2P02689 132 aa16.27■□□□□ 0.2
RCCD1-202ENST00000554302 LPAR6P43657 344 aa16.27■□□□□ 0.2
RCCD1-202ENST00000554302 ERVK-16P61578 105 aa16.27■□□□□ 0.2
RCCD1-202ENST00000554302 TMEM69Q5SWH9 247 aa16.27■□□□□ 0.2
RCCD1-202ENST00000554302 SLC25A24Q6NUK1 477 aa16.27■□□□□ 0.2
RCCD1-202ENST00000554302 OR2C3Q8N628 320 aa16.27■□□□□ 0.2
RCCD1-202ENST00000554302 LSM10Q969L4 123 aaKnown RBP16.27■□□□□ 0.2
RCCD1-202ENST00000554302 OR2T8A6NH00 312 aa16.26■□□□□ 0.19
RCCD1-202ENST00000554302 KRASP01116 189 aa16.26■□□□□ 0.19
RCCD1-202ENST00000554302 TAS2R46P59540 309 aa16.26■□□□□ 0.19
RCCD1-202ENST00000554302 SPSB3Q6PJ21 355 aa16.26■□□□□ 0.19
RCCD1-202ENST00000554302 WFDC3Q8IUB2 231 aa16.26■□□□□ 0.19
RCCD1-202ENST00000554302 LYSMD2Q8IV50 215 aa16.26■□□□□ 0.19
RCCD1-202ENST00000554302 SAMD12Q8N8I0 201 aa16.26■□□□□ 0.19
RCCD1-202ENST00000554302 SCARB1Q8WTV0 552 aa16.26■□□□□ 0.19
RCCD1-202ENST00000554302 YIPF6Q96EC8 236 aa16.26■□□□□ 0.19
RCCD1-202ENST00000554302 DAZ1Q9NQZ3 744 aaKnown RBP16.26■□□□□ 0.19
RCCD1-202ENST00000554302 K7EIM0 57 aa16.25■□□□□ 0.19
RCCD1-202ENST00000554302 NDUFA4O00483 81 aa16.25■□□□□ 0.19
RCCD1-202ENST00000554302 ADMP35318 185 aa16.25■□□□□ 0.19
RCCD1-202ENST00000554302 CMTM1Q8IZ96 169 aa16.25■□□□□ 0.19
RCCD1-202ENST00000554302 OR5H2Q8NGV7 314 aa16.25■□□□□ 0.19
RCCD1-202ENST00000554302 ZNF414Q96IQ9 312 aa16.25■□□□□ 0.19
RCCD1-202ENST00000554302 CHRDL1Q9BU40 450 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms