RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 ZNF735P0CB33 412 aa2.24□□□□□ -2.05
SLIRP-202ENST00000553981 PTHLHP12272 177 aa2.24□□□□□ -2.05
SLIRP-202ENST00000553981 C4BPBP20851 252 aa2.24□□□□□ -2.05
SLIRP-202ENST00000553981 BMI1P35226 326 aa2.24□□□□□ -2.05
SLIRP-202ENST00000553981 FUSP35637 526 aaKnown RBP eCLIP2.24□□□□□ -2.05
SLIRP-202ENST00000553981 GBX2P52951 348 aaPredicted RBP2.24□□□□□ -2.05
SLIRP-202ENST00000553981 CLDN12P56749 244 aa2.24□□□□□ -2.05
SLIRP-202ENST00000553981 RPS27AP62979 156 aaKnown RBP2.24□□□□□ -2.05
SLIRP-202ENST00000553981 ATP5G2Q06055 141 aa2.24□□□□□ -2.05
SLIRP-202ENST00000553981 TNXAQ16473 311 aa2.24□□□□□ -2.05
SLIRP-202ENST00000553981 C15orf32Q32M92 178 aa2.24□□□□□ -2.05
SLIRP-202ENST00000553981 Q499Y3 187 aa2.24□□□□□ -2.05
SLIRP-202ENST00000553981 HSP90B2PQ58FF3 399 aa2.24□□□□□ -2.05
SLIRP-202ENST00000553981 MEDAGQ5VYS4 303 aa2.24□□□□□ -2.05
SLIRP-202ENST00000553981 ZNF57Q68EA5 555 aaPredicted RBP2.24□□□□□ -2.05
SLIRP-202ENST00000553981 RPL22L1Q6P5R6 122 aaKnown RBP2.24□□□□□ -2.05
SLIRP-202ENST00000553981 TMEM91Q6ZNR0 172 aa2.24□□□□□ -2.05
SLIRP-202ENST00000553981 ZNF554Q86TJ5 538 aa2.24□□□□□ -2.05
SLIRP-202ENST00000553981 NFE4Q86UQ8 179 aa2.24□□□□□ -2.05
SLIRP-202ENST00000553981 PDPNQ86YL7 162 aa2.24□□□□□ -2.05
SLIRP-202ENST00000553981 PUSL1Q8N0Z8 303 aaKnown RBP2.24□□□□□ -2.05
SLIRP-202ENST00000553981 CBR4Q8N4T8 237 aa2.24□□□□□ -2.05
SLIRP-202ENST00000553981 FAM89BQ8N5H3 189 aa2.24□□□□□ -2.05
SLIRP-202ENST00000553981 JAGN1Q8N5M9 183 aa2.24□□□□□ -2.05
SLIRP-202ENST00000553981 DMBX1Q8NFW5 382 aa2.24□□□□□ -2.05
SLIRP-202ENST00000553981 OR52B4Q8NGK2 314 aa2.24□□□□□ -2.05
SLIRP-202ENST00000553981 OR5B3Q8NH48 314 aa2.24□□□□□ -2.05
SLIRP-202ENST00000553981 SETD6Q8TBK2 473 aa2.24□□□□□ -2.05
SLIRP-202ENST00000553981 DYNLRB2Q8TF09 96 aa2.24□□□□□ -2.05
SLIRP-202ENST00000553981 TRUB1Q8WWH5 349 aaKnown RBP2.24□□□□□ -2.05
SLIRP-202ENST00000553981 SNAPC3Q92966 411 aa2.24□□□□□ -2.05
SLIRP-202ENST00000553981 CENPNQ96H22 339 aaPredicted RBP2.24□□□□□ -2.05
SLIRP-202ENST00000553981 ARHGAP5-AS1Q96IT6 56 aa2.24□□□□□ -2.05
SLIRP-202ENST00000553981 USMG5Q96IX5 58 aa2.24□□□□□ -2.05
SLIRP-202ENST00000553981 HARBI1Q96MB7 349 aa2.24□□□□□ -2.05
SLIRP-202ENST00000553981 CABLES2Q9BTV7 478 aa2.24□□□□□ -2.05
SLIRP-202ENST00000553981 TEX12Q9BXU0 123 aa2.24□□□□□ -2.05
SLIRP-202ENST00000553981 PECRQ9BY49 303 aa2.24□□□□□ -2.05
SLIRP-202ENST00000553981 ZNF436Q9C0F3 470 aaPredicted RBP2.24□□□□□ -2.05
SLIRP-202ENST00000553981 BABAM2Q9NXR7 383 aa2.24□□□□□ -2.05
SLIRP-202ENST00000553981 SLC2A8Q9NY64 477 aa2.24□□□□□ -2.05
SLIRP-202ENST00000553981 FBXL17Q9UF56 701 aa2.24□□□□□ -2.05
SLIRP-202ENST00000553981 ZNF221Q9UK13 617 aa2.24□□□□□ -2.05
SLIRP-202ENST00000553981 TP53TG1Q9Y2A0 90 aa2.24□□□□□ -2.05
SLIRP-202ENST00000553981 VPS13BQ7Z7G8 4022 aa2.23□□□□□ -2.05
SLIRP-202ENST00000553981 IGLV2-18A0A075B6J9 118 aa2.23□□□□□ -2.05
SLIRP-202ENST00000553981 IGHV4-4A0A075B6R2 117 aa2.23□□□□□ -2.05
SLIRP-202ENST00000553981 IGHV3OR16-13A0A075B7E8 117 aa2.23□□□□□ -2.05
SLIRP-202ENST00000553981 TRBV6-7A0A0A0MS04 114 aa2.23□□□□□ -2.05
SLIRP-202ENST00000553981 IGHV3-49A0A0A0MS15 119 aa2.23□□□□□ -2.05
SLIRP-202ENST00000553981 IGHV3-74A0A0B4J1X5 117 aa2.23□□□□□ -2.05
SLIRP-202ENST00000553981 A0A0B4J203 849 aa2.23□□□□□ -2.05
SLIRP-202ENST00000553981 A0A0G2JLM5 398 aa2.23□□□□□ -2.05
SLIRP-202ENST00000553981 LOC100130705A0A1B0GUX0 176 aa2.23□□□□□ -2.05
SLIRP-202ENST00000553981 IGLC7A0M8Q6 106 aa2.23□□□□□ -2.05
SLIRP-202ENST00000553981 IGLL5B9A064 214 aa2.23□□□□□ -2.05
SLIRP-202ENST00000553981 MAGEB3O15480 346 aa2.23□□□□□ -2.05
SLIRP-202ENST00000553981 GYG2O15488 501 aa2.23□□□□□ -2.05
SLIRP-202ENST00000553981 AIREO43918 545 aa2.23□□□□□ -2.05
SLIRP-202ENST00000553981 GGCTO75223 188 aaKnown RBP2.23□□□□□ -2.05
SLIRP-202ENST00000553981 ZNF780AO75290 641 aaPredicted RBP2.23□□□□□ -2.05
SLIRP-202ENST00000553981 CA11O75493 328 aa2.23□□□□□ -2.05
SLIRP-202ENST00000553981 CRYZL1O95825 349 aa2.23□□□□□ -2.05
SLIRP-202ENST00000553981 CLEC3BP05452 202 aa2.23□□□□□ -2.05
SLIRP-202ENST00000553981 CTSDP07339 412 aaPredicted RBP2.23□□□□□ -2.05
SLIRP-202ENST00000553981 PRSS1P07477 247 aa2.23□□□□□ -2.05
SLIRP-202ENST00000553981 AZU1P20160 251 aa2.23□□□□□ -2.05
SLIRP-202ENST00000553981 AADACP22760 399 aa2.23□□□□□ -2.05
SLIRP-202ENST00000553981 PSMB6P28072 239 aa2.23□□□□□ -2.05
SLIRP-202ENST00000553981 MC5RP33032 325 aa2.23□□□□□ -2.05
SLIRP-202ENST00000553981 ARL3P36405 182 aa2.23□□□□□ -2.05
SLIRP-202ENST00000553981 UBE2KP61086 200 aa2.23□□□□□ -2.05
SLIRP-202ENST00000553981 RELQ04864 619 aaPredicted RBP2.23□□□□□ -2.05
SLIRP-202ENST00000553981 MED21Q13503 144 aa2.23□□□□□ -2.05
SLIRP-202ENST00000553981 P2RY14Q15391 338 aa2.23□□□□□ -2.05
SLIRP-202ENST00000553981 C12orf74Q32Q52 190 aa2.23□□□□□ -2.05
SLIRP-202ENST00000553981 FAM106AQ4KMX7 169 aa2.23□□□□□ -2.05
SLIRP-202ENST00000553981 CCDC58Q4VC31 144 aa2.23□□□□□ -2.05
SLIRP-202ENST00000553981 OR2B11Q5JQS5 317 aa2.23□□□□□ -2.05
SLIRP-202ENST00000553981 FAM122CQ6P4D5 195 aa2.23□□□□□ -2.05
SLIRP-202ENST00000553981 TRAT1Q6PIZ9 186 aa2.23□□□□□ -2.05
SLIRP-202ENST00000553981 SSX9Q7RTT3 188 aa2.23□□□□□ -2.05
SLIRP-202ENST00000553981 H1FOOQ8IZA3 346 aaPredicted RBP2.23□□□□□ -2.05
SLIRP-202ENST00000553981 STX19Q8N4C7 294 aa2.23□□□□□ -2.05
SLIRP-202ENST00000553981 CSNK1G2-AS1Q8NCQ2 148 aa2.23□□□□□ -2.05
SLIRP-202ENST00000553981 CCDC197Q8NCU1 140 aa2.23□□□□□ -2.05
SLIRP-202ENST00000553981 OR10W1Q8NGF6 305 aa2.23□□□□□ -2.05
SLIRP-202ENST00000553981 OR6M1Q8NGM8 313 aa2.23□□□□□ -2.05
SLIRP-202ENST00000553981 C11orf45Q8TAV5 145 aa2.23□□□□□ -2.05
SLIRP-202ENST00000553981 ZNF502Q8TBZ5 544 aa2.23□□□□□ -2.05
SLIRP-202ENST00000553981 CD300LFQ8TDQ1 290 aa2.23□□□□□ -2.05
SLIRP-202ENST00000553981 RNF2Q99496 336 aa2.23□□□□□ -2.05
SLIRP-202ENST00000553981 TSNAXQ99598 290 aaKnown RBP2.23□□□□□ -2.05
SLIRP-202ENST00000553981 PRRG3Q9BZD7 231 aa2.23□□□□□ -2.05
SLIRP-202ENST00000553981 CSTL1Q9H114 145 aa2.23□□□□□ -2.05
SLIRP-202ENST00000553981 OR2D2Q9H210 308 aa2.23□□□□□ -2.05
SLIRP-202ENST00000553981 MED4Q9NPJ6 270 aa2.23□□□□□ -2.05
SLIRP-202ENST00000553981 ARGLU1Q9NWB6 273 aaPredicted RBP2.23□□□□□ -2.05
SLIRP-202ENST00000553981 FKBP14Q9NWM8 211 aa2.23□□□□□ -2.05
SLIRP-202ENST00000553981 PAK1IP1Q9NWT1 392 aaPredicted RBP2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms