RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 COMMD5Q9GZQ3 224 aa6.63□□□□□ -1.35
SYNE2-209ENST00000553308 ACOT13Q9NPJ3 140 aa6.63□□□□□ -1.35
SYNE2-209ENST00000553308 CCL28Q9NRJ3 127 aa6.63□□□□□ -1.35
SYNE2-209ENST00000553308 SCN3BQ9NY72 215 aa6.63□□□□□ -1.35
SYNE2-209ENST00000553308 SMPXQ9UHP9 88 aa6.63□□□□□ -1.35
SYNE2-209ENST00000553308 ETV7Q9Y603 341 aa6.63□□□□□ -1.35
SYNE2-209ENST00000553308 SMIM30A4D0T7 59 aa6.62□□□□□ -1.35
SYNE2-209ENST00000553308 ERICH4A6NGS2 130 aa6.62□□□□□ -1.35
SYNE2-209ENST00000553308 C15orf62A8K5M9 175 aa6.62□□□□□ -1.35
SYNE2-209ENST00000553308 SULT1C2O00338 296 aa6.62□□□□□ -1.35
SYNE2-209ENST00000553308 PDCD5O14737 125 aa6.62□□□□□ -1.35
SYNE2-209ENST00000553308 CHEK1O14757 476 aa6.62□□□□□ -1.35
SYNE2-209ENST00000553308 SSX5O60225 188 aa6.62□□□□□ -1.35
SYNE2-209ENST00000553308 SERPINE2P07093 398 aa6.62□□□□□ -1.35
SYNE2-209ENST00000553308 OR13C7P0DN81 318 aa6.62□□□□□ -1.35
SYNE2-209ENST00000553308 PTHLHP12272 177 aa6.62□□□□□ -1.35
SYNE2-209ENST00000553308 ARL6IP1Q15041 203 aa6.62□□□□□ -1.35
SYNE2-209ENST00000553308 POU2AF1Q16633 256 aa6.62□□□□□ -1.35
SYNE2-209ENST00000553308 OGFRL1Q5TC84 451 aaPredicted RBP6.62□□□□□ -1.35
SYNE2-209ENST00000553308 HACD4Q5VWC8 232 aa6.62□□□□□ -1.35
SYNE2-209ENST00000553308 SLC25A24Q6NUK1 477 aa6.62□□□□□ -1.35
SYNE2-209ENST00000553308 ZNF773Q6PK81 442 aa6.62□□□□□ -1.35
SYNE2-209ENST00000553308 NR2C2APQ86WQ0 139 aa6.62□□□□□ -1.35
SYNE2-209ENST00000553308 GBGT1Q8N5D6 347 aa6.62□□□□□ -1.35
SYNE2-209ENST00000553308 Q8NAQ8 132 aa6.62□□□□□ -1.35
SYNE2-209ENST00000553308 UBAC2Q8NBM4 344 aa6.62□□□□□ -1.35
SYNE2-209ENST00000553308 OR13F1Q8NGS4 319 aa6.62□□□□□ -1.35
SYNE2-209ENST00000553308 SCARB1Q8WTV0 552 aa6.62□□□□□ -1.35
SYNE2-209ENST00000553308 SECTM1Q8WVN6 248 aa6.62□□□□□ -1.35
SYNE2-209ENST00000553308 MGLLQ99685 303 aa6.62□□□□□ -1.35
SYNE2-209ENST00000553308 SRSF8Q9BRL6 282 aaKnown RBP6.62□□□□□ -1.35
SYNE2-209ENST00000553308 RHPN1-AS1Q9BWJ2 59 aa6.62□□□□□ -1.35
SYNE2-209ENST00000553308 DCSTAMPQ9H295 470 aa6.62□□□□□ -1.35
SYNE2-209ENST00000553308 TMEM140Q9NV12 185 aa6.62□□□□□ -1.35
SYNE2-209ENST00000553308 C21orf62Q9NYP8 219 aa6.62□□□□□ -1.35
SYNE2-209ENST00000553308 ANXA10Q9UJ72 324 aa6.62□□□□□ -1.35
SYNE2-209ENST00000553308 IGHV3OR16-13A0A075B7E8 117 aa6.61□□□□□ -1.35
SYNE2-209ENST00000553308 IGHV3-74A0A0B4J1X5 117 aa6.61□□□□□ -1.35
SYNE2-209ENST00000553308 TRAV1-2A0A0B4J238 106 aa6.61□□□□□ -1.35
SYNE2-209ENST00000553308 IGHV7-4-1A0A0J9YVY3 117 aa6.61□□□□□ -1.35
SYNE2-209ENST00000553308 C11orf94C9JXX5 98 aa6.61□□□□□ -1.35
SYNE2-209ENST00000553308 K7EIM0 57 aa6.61□□□□□ -1.35
SYNE2-209ENST00000553308 CYB5BO43169 146 aa6.61□□□□□ -1.35
SYNE2-209ENST00000553308 RBFOX2O43251 390 aaKnown RBP eCLIP6.61□□□□□ -1.35
SYNE2-209ENST00000553308 TRAPPC2P0DI81 140 aa6.61□□□□□ -1.35
SYNE2-209ENST00000553308 TRAPPC2BP0DI82 140 aa6.61□□□□□ -1.35
SYNE2-209ENST00000553308 NQO2P16083 231 aa6.61□□□□□ -1.35
SYNE2-209ENST00000553308 RAB3BP20337 219 aa6.61□□□□□ -1.35
SYNE2-209ENST00000553308 MYL9P24844 172 aa6.61□□□□□ -1.35
SYNE2-209ENST00000553308 TAS2R31P59538 309 aa6.61□□□□□ -1.35
SYNE2-209ENST00000553308 GNG2P59768 71 aa6.61□□□□□ -1.35
SYNE2-209ENST00000553308 TMEM187Q14656 261 aa6.61□□□□□ -1.35
SYNE2-209ENST00000553308 Q56UQ5 140 aa6.61□□□□□ -1.35
SYNE2-209ENST00000553308 TMEM116Q8NCL8 245 aa6.61□□□□□ -1.35
SYNE2-209ENST00000553308 DMBX1Q8NFW5 382 aa6.61□□□□□ -1.35
SYNE2-209ENST00000553308 OR51H1Q8NH63 302 aa6.61□□□□□ -1.35
SYNE2-209ENST00000553308 AIFM2Q9BRQ8 373 aa6.61□□□□□ -1.35
SYNE2-209ENST00000553308 KRTAP4-5Q9BYR2 181 aa6.61□□□□□ -1.35
SYNE2-209ENST00000553308 F11RQ9Y624 299 aaKnown RBP6.61□□□□□ -1.35
SYNE2-209ENST00000553308 IGHV4-4A0A075B6R2 117 aa6.6□□□□□ -1.35
SYNE2-209ENST00000553308 IGHV4-28A0A0C4DH34 117 aa6.6□□□□□ -1.35
SYNE2-209ENST00000553308 TEX50A0A1B0GTY4 177 aa6.6□□□□□ -1.35
SYNE2-209ENST00000553308 PRSS29PA6NIE9 313 aa6.6□□□□□ -1.35
SYNE2-209ENST00000553308 CASQ2O14958 399 aaPredicted RBP6.6□□□□□ -1.35
SYNE2-209ENST00000553308 RGS10O43665 173 aa6.6□□□□□ -1.35
SYNE2-209ENST00000553308 MRPS14O60783 128 aaKnown RBP6.6□□□□□ -1.35
SYNE2-209ENST00000553308 HPRT1P00492 218 aa6.6□□□□□ -1.35
SYNE2-209ENST00000553308 PPYP01298 95 aa6.6□□□□□ -1.35
SYNE2-209ENST00000553308 CTSGP08311 255 aa6.6□□□□□ -1.35
SYNE2-209ENST00000553308 RBMY1A1P0DJD3 496 aaKnown RBP6.6□□□□□ -1.35
SYNE2-209ENST00000553308 RBMY1CP0DJD4 496 aa6.6□□□□□ -1.35
SYNE2-209ENST00000553308 HLA-DMBP28068 263 aa6.6□□□□□ -1.35
SYNE2-209ENST00000553308 FCGR2CP31995 323 aa6.6□□□□□ -1.35
SYNE2-209ENST00000553308 CMC4P56277 68 aaPredicted RBP6.6□□□□□ -1.35
SYNE2-209ENST00000553308 CATR1Q13166 79 aa6.6□□□□□ -1.35
SYNE2-209ENST00000553308 RBMY1FQ15415 496 aaKnown RBP6.6□□□□□ -1.35
SYNE2-209ENST00000553308 MSMO1Q15800 293 aa6.6□□□□□ -1.35
SYNE2-209ENST00000553308 FAM90A2PQ658T7 463 aa6.6□□□□□ -1.35
SYNE2-209ENST00000553308 LEMD1Q68G75 181 aa6.6□□□□□ -1.35
SYNE2-209ENST00000553308 THOC7Q6I9Y2 204 aaKnown RBP6.6□□□□□ -1.35
SYNE2-209ENST00000553308 Q6ZTC4 211 aa6.6□□□□□ -1.35
SYNE2-209ENST00000553308 ATP6V0BQ99437 205 aa6.6□□□□□ -1.35
SYNE2-209ENST00000553308 HINT2Q9BX68 163 aa6.6□□□□□ -1.35
SYNE2-209ENST00000553308 CCDC90BQ9GZT6 254 aa6.6□□□□□ -1.35
SYNE2-209ENST00000553308 SLC5A7Q9GZV3 580 aa6.6□□□□□ -1.35
SYNE2-209ENST00000553308 HRH4Q9H3N8 390 aa6.6□□□□□ -1.35
SYNE2-209ENST00000553308 DUSP21Q9H596 190 aa6.6□□□□□ -1.35
SYNE2-209ENST00000553308 TPRKBQ9Y3C4 175 aa6.6□□□□□ -1.35
SYNE2-209ENST00000553308 VPS13DQ5THJ4 4388 aa6.6□□□□□ -1.35
SYNE2-209ENST00000553308 C15orf61A6NNL5 157 aa6.59□□□□□ -1.35
SYNE2-209ENST00000553308 RTL8CO15255 209 aa6.59□□□□□ -1.35
SYNE2-209ENST00000553308 NUPL2O15504 423 aaKnown RBP6.59□□□□□ -1.35
SYNE2-209ENST00000553308 YIF1AO95070 293 aa6.59□□□□□ -1.35
SYNE2-209ENST00000553308 FGF2P09038 288 aa6.59□□□□□ -1.35
SYNE2-209ENST00000553308 FXYD4P59646 89 aa6.59□□□□□ -1.35
SYNE2-209ENST00000553308 DEFB131AP59861 70 aa6.59□□□□□ -1.35
SYNE2-209ENST00000553308 ARPC4P59998 168 aa6.59□□□□□ -1.35
SYNE2-209ENST00000553308 ZNF818PQ6ZRF7 136 aa6.59□□□□□ -1.35
SYNE2-209ENST00000553308 TCF24Q7RTU0 167 aa6.59□□□□□ -1.35
SYNE2-209ENST00000553308 HSD17B13Q7Z5P4 300 aaPredicted RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms