RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 GPR146Q96CH1 333 aa3.21□□□□□ -1.9
SCFD1-208ENST00000553278 HIST1H2BNQ99877 126 aa3.21□□□□□ -1.9
SCFD1-208ENST00000553278 HIST1H2BMQ99879 126 aa3.21□□□□□ -1.9
SCFD1-208ENST00000553278 GINS3Q9BRX5 216 aa3.21□□□□□ -1.9
SCFD1-208ENST00000553278 BIN3Q9NQY0 253 aa3.21□□□□□ -1.9
SCFD1-208ENST00000553278 IL36BQ9NZH7 164 aa3.21□□□□□ -1.9
SCFD1-208ENST00000553278 DOCK6Q96HP0 2047 aa3.2□□□□□ -1.9
SCFD1-208ENST00000553278 VPS37CA5D8V6 355 aaPredicted RBP3.2□□□□□ -1.9
SCFD1-208ENST00000553278 LEPROTO15243 131 aa3.2□□□□□ -1.9
SCFD1-208ENST00000553278 RTL8CO15255 209 aa3.2□□□□□ -1.9
SCFD1-208ENST00000553278 S1PR2O95136 353 aa3.2□□□□□ -1.9
SCFD1-208ENST00000553278 IFNA10P01566 189 aa3.2□□□□□ -1.9
SCFD1-208ENST00000553278 IFI30P13284 250 aa3.2□□□□□ -1.9
SCFD1-208ENST00000553278 CD24P25063 80 aa3.2□□□□□ -1.9
SCFD1-208ENST00000553278 TSNQ15631 228 aaKnown RBP3.2□□□□□ -1.9
SCFD1-208ENST00000553278 IGFBP7Q16270 282 aa3.2□□□□□ -1.9
SCFD1-208ENST00000553278 MIAQ16674 131 aa3.2□□□□□ -1.9
SCFD1-208ENST00000553278 OR10D4PQ8NGN7 298 aa3.2□□□□□ -1.9
SCFD1-208ENST00000553278 SLC7A6Q92536 515 aa3.2□□□□□ -1.9
SCFD1-208ENST00000553278 CACNA1DQ01668 2161 aa3.19□□□□□ -1.9
SCFD1-208ENST00000553278 SIPA1L1O43166 1804 aa3.19□□□□□ -1.9
SCFD1-208ENST00000553278 DOCK3Q8IZD9 2030 aa3.19□□□□□ -1.9
SCFD1-208ENST00000553278 A0A1W2PQD3 144 aa3.19□□□□□ -1.9
SCFD1-208ENST00000553278 C1QAP02745 245 aa3.19□□□□□ -1.9
SCFD1-208ENST00000553278 CA5AP35218 305 aa3.19□□□□□ -1.9
SCFD1-208ENST00000553278 HIST1H4AP62805 103 aaKnown RBP3.19□□□□□ -1.9
SCFD1-208ENST00000553278 AADACL3Q5VUY0 350 aa3.19□□□□□ -1.9
SCFD1-208ENST00000553278 SMIM20Q8N5G0 67 aa3.19□□□□□ -1.9
SCFD1-208ENST00000553278 C12orf45Q8N5I9 185 aaPredicted RBP3.19□□□□□ -1.9
SCFD1-208ENST00000553278 FGF13Q92913 245 aa3.19□□□□□ -1.9
SCFD1-208ENST00000553278 AICDAQ9GZX7 198 aa3.19□□□□□ -1.9
SCFD1-208ENST00000553278 UFC1Q9Y3C8 167 aa3.19□□□□□ -1.9
SCFD1-208ENST00000553278 HSPE1-MOB4S4R3N1 261 aa3.19□□□□□ -1.9
SCFD1-208ENST00000553278 PBRM1Q86U86 1689 aa3.19□□□□□ -1.9
SCFD1-208ENST00000553278 ZNF407Q9C0G0 2248 aa3.18□□□□□ -1.9
SCFD1-208ENST00000553278 MDFIC2A0A1B0GVS7 189 aa3.18□□□□□ -1.9
SCFD1-208ENST00000553278 PPP5D1E7EU14 171 aa3.18□□□□□ -1.9
SCFD1-208ENST00000553278 G3V2T6 193 aa3.18□□□□□ -1.9
SCFD1-208ENST00000553278 H3BQV1 296 aa3.18□□□□□ -1.9
SCFD1-208ENST00000553278 UCHL1P09936 223 aa3.18□□□□□ -1.9
SCFD1-208ENST00000553278 SMIM17P0DL12 118 aa3.18□□□□□ -1.9
SCFD1-208ENST00000553278 SERPINB1P30740 379 aa3.18□□□□□ -1.9
SCFD1-208ENST00000553278 AKR1C8PQ5T2L2 129 aa3.18□□□□□ -1.9
SCFD1-208ENST00000553278 OR5C1Q8NGR4 320 aa3.18□□□□□ -1.9
SCFD1-208ENST00000553278 SLC25A40Q8TBP6 338 aa3.18□□□□□ -1.9
SCFD1-208ENST00000553278 TVP23BQ9NYZ1 205 aa3.18□□□□□ -1.9
SCFD1-208ENST00000553278 CYSLTR1Q9Y271 337 aa3.18□□□□□ -1.9
SCFD1-208ENST00000553278 ANKRD30AQ9BXX3 1397 aa3.17□□□□□ -1.9
SCFD1-208ENST00000553278 A0A0J9YW62 118 aa3.17□□□□□ -1.9
SCFD1-208ENST00000553278 GGT3PA6NGU5 568 aa3.17□□□□□ -1.9
SCFD1-208ENST00000553278 VGLL3A8MV65 326 aa3.17□□□□□ -1.9
SCFD1-208ENST00000553278 IGKV1-5P01602 117 aa3.17□□□□□ -1.9
SCFD1-208ENST00000553278 C1QBP02746 253 aa3.17□□□□□ -1.9
SCFD1-208ENST00000553278 SPI1P17947 270 aa3.17□□□□□ -1.9
SCFD1-208ENST00000553278 RPL18Q07020 188 aaKnown RBP3.17□□□□□ -1.9
SCFD1-208ENST00000553278 BAMBIQ13145 260 aa3.17□□□□□ -1.9
SCFD1-208ENST00000553278 Q6Q795 121 aa3.17□□□□□ -1.9
SCFD1-208ENST00000553278 ZNF705AQ6ZN79 300 aaPredicted RBP3.17□□□□□ -1.9
SCFD1-208ENST00000553278 STX19Q8N4C7 294 aa3.17□□□□□ -1.9
SCFD1-208ENST00000553278 H1FXQ92522 213 aaKnown RBP3.17□□□□□ -1.9
SCFD1-208ENST00000553278 C2orf50Q96LR7 162 aa3.17□□□□□ -1.9
SCFD1-208ENST00000553278 TM2D3Q9BRN9 247 aa3.17□□□□□ -1.9
SCFD1-208ENST00000553278 DERL1Q9BUN8 251 aa3.17□□□□□ -1.9
SCFD1-208ENST00000553278 MINOS1-NBL1R4GNA1 71 aa3.17□□□□□ -1.9
SCFD1-208ENST00000553278 SYNMO15061 1565 aa3.17□□□□□ -1.9
SCFD1-208ENST00000553278 REREQ9P2R6 1566 aa3.17□□□□□ -1.9
SCFD1-208ENST00000553278 GNG14A0A1W2PPG7 69 aa3.16□□□□□ -1.9
SCFD1-208ENST00000553278 IRGMA1A4Y4 181 aa3.16□□□□□ -1.9
SCFD1-208ENST00000553278 FABP5P3A8MUU1 101 aa3.16□□□□□ -1.9
SCFD1-208ENST00000553278 G3V3Q6 166 aa3.16□□□□□ -1.9
SCFD1-208ENST00000553278 NDUFC2O95298 119 aa3.16□□□□□ -1.9
SCFD1-208ENST00000553278 IGLV3-19P01714 112 aa3.16□□□□□ -1.9
SCFD1-208ENST00000553278 IDO1P14902 403 aa3.16□□□□□ -1.9
SCFD1-208ENST00000553278 HLA-DMBP28068 263 aa3.16□□□□□ -1.9
SCFD1-208ENST00000553278 PHBP35232 272 aa3.16□□□□□ -1.9
SCFD1-208ENST00000553278 MEF2BQ02080 365 aaPredicted RBP3.16□□□□□ -1.9
SCFD1-208ENST00000553278 MOGQ16653 247 aa3.16□□□□□ -1.9
SCFD1-208ENST00000553278 GRINAQ7Z429 371 aa3.16□□□□□ -1.9
SCFD1-208ENST00000553278 TAC4Q86UU9 113 aa3.16□□□□□ -1.9
SCFD1-208ENST00000553278 ZNF561Q8N587 486 aa3.16□□□□□ -1.9
SCFD1-208ENST00000553278 RASSF5Q8WWW0 418 aa3.16□□□□□ -1.9
SCFD1-208ENST00000553278 LYRM2Q9NU23 88 aaPredicted RBP3.16□□□□□ -1.9
SCFD1-208ENST00000553278 SMPXQ9UHP9 88 aa3.16□□□□□ -1.9
SCFD1-208ENST00000553278 PRNDQ9UKY0 176 aa3.16□□□□□ -1.9
SCFD1-208ENST00000553278 MIA2Q96PC5 1412 aa3.16□□□□□ -1.9
SCFD1-208ENST00000553278 KIF13BQ9NQT8 1826 aa3.16□□□□□ -1.9
SCFD1-208ENST00000553278 NEO1Q92859 1461 aa3.16□□□□□ -1.9
SCFD1-208ENST00000553278 IGKV1D-43A0A0B4J1Z2 117 aa3.15□□□□□ -1.91
SCFD1-208ENST00000553278 IGKV2-24A0A0C4DH68 120 aa3.15□□□□□ -1.91
SCFD1-208ENST00000553278 C11orf86A6NJI1 115 aa3.15□□□□□ -1.91
SCFD1-208ENST00000553278 J3QRK9 145 aa3.15□□□□□ -1.91
SCFD1-208ENST00000553278 AIPO00170 330 aa3.15□□□□□ -1.91
SCFD1-208ENST00000553278 GNRH2O43555 120 aa3.15□□□□□ -1.91
SCFD1-208ENST00000553278 CREBL2O60519 120 aaPredicted RBP3.15□□□□□ -1.91
SCFD1-208ENST00000553278 IFNA21P01568 189 aa3.15□□□□□ -1.91
SCFD1-208ENST00000553278 IGLV6-57P01721 117 aa3.15□□□□□ -1.91
SCFD1-208ENST00000553278 TFPTP0C1Z6 253 aa3.15□□□□□ -1.91
SCFD1-208ENST00000553278 ZNF728P0DKX0 622 aa3.15□□□□□ -1.91
SCFD1-208ENST00000553278 GZMHP20718 246 aa3.15□□□□□ -1.91
SCFD1-208ENST00000553278 DEFA3P59666 94 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms