RNA–Protein interactions for RNA: ENST00000551623.1

PTCH1-223, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-223ENST00000551623 CLCC1Q96S66 551 aa1.5□□□□□ -2.17
PTCH1-223ENST00000551623 RNF2Q99496 336 aa1.5□□□□□ -2.17
PTCH1-223ENST00000551623 UQCC2Q9BRT2 126 aa1.5□□□□□ -2.17
PTCH1-223ENST00000551623 PAXXQ9BUH6 204 aa1.5□□□□□ -2.17
PTCH1-223ENST00000551623 TM2D1Q9BX74 207 aa1.5□□□□□ -2.17
PTCH1-223ENST00000551623 VSIRQ9H7M9 311 aa1.5□□□□□ -2.17
PTCH1-223ENST00000551623 GORASP2Q9H8Y8 452 aa1.5□□□□□ -2.17
PTCH1-223ENST00000551623 FAM212BQ9NTI7 297 aaPredicted RBP1.5□□□□□ -2.17
PTCH1-223ENST00000551623 CLN6Q9NWW5 311 aa1.5□□□□□ -2.17
PTCH1-223ENST00000551623 CMTM6Q9NX76 183 aa1.5□□□□□ -2.17
PTCH1-223ENST00000551623 ABCD2Q9UBJ2 740 aa1.5□□□□□ -2.17
PTCH1-223ENST00000551623 AASSQ9UDR5 926 aa1.5□□□□□ -2.17
PTCH1-223ENST00000551623 RFNGQ9Y644 331 aa1.5□□□□□ -2.17
PTCH1-223ENST00000551623 FAT3Q8TDW7 4589 aa1.5□□□□□ -2.17
PTCH1-223ENST00000551623 IGLV5-45A0A087WSX0 123 aa1.49□□□□□ -2.17
PTCH1-223ENST00000551623 TRBV6-6A0A0A6YYG2 114 aa1.49□□□□□ -2.17
PTCH1-223ENST00000551623 TRAV3A0A0B4J244 114 aa1.49□□□□□ -2.17
PTCH1-223ENST00000551623 A0A1W2PP11 408 aa1.49□□□□□ -2.17
PTCH1-223ENST00000551623 A8MTW9 85 aa1.49□□□□□ -2.17
PTCH1-223ENST00000551623 K7EQG2 157 aa1.49□□□□□ -2.17
PTCH1-223ENST00000551623 NME4O00746 187 aa1.49□□□□□ -2.17
PTCH1-223ENST00000551623 NDUFAB1O14561 156 aa1.49□□□□□ -2.17
PTCH1-223ENST00000551623 MRASO14807 208 aa1.49□□□□□ -2.17
PTCH1-223ENST00000551623 GEMIN2O14893 280 aaKnown RBP1.49□□□□□ -2.17
PTCH1-223ENST00000551623 ZNF780AO75290 641 aaPredicted RBP1.49□□□□□ -2.17
PTCH1-223ENST00000551623 OR2J3O76001 311 aa1.49□□□□□ -2.17
PTCH1-223ENST00000551623 OR7C1O76099 320 aaPredicted RBP1.49□□□□□ -2.17
PTCH1-223ENST00000551623 DIRAS1O95057 198 aa1.49□□□□□ -2.17
PTCH1-223ENST00000551623 SOX14O95416 240 aa1.49□□□□□ -2.17
PTCH1-223ENST00000551623 DIRAS3O95661 229 aa1.49□□□□□ -2.17
PTCH1-223ENST00000551623 NAPSAO96009 420 aa1.49□□□□□ -2.17
PTCH1-223ENST00000551623 DHFRP00374 187 aa1.49□□□□□ -2.17
PTCH1-223ENST00000551623 APOA2P02652 100 aa1.49□□□□□ -2.17
PTCH1-223ENST00000551623 MAS1P04201 325 aa1.49□□□□□ -2.17
PTCH1-223ENST00000551623 CLEC3BP05452 202 aa1.49□□□□□ -2.17
PTCH1-223ENST00000551623 RRASP10301 218 aa1.49□□□□□ -2.17
PTCH1-223ENST00000551623 GATA2P23769 480 aaPredicted RBP1.49□□□□□ -2.17
PTCH1-223ENST00000551623 RRM2P31350 389 aa1.49□□□□□ -2.17
PTCH1-223ENST00000551623 CASQ1P31415 396 aa1.49□□□□□ -2.17
PTCH1-223ENST00000551623 MAS1LP35410 378 aa1.49□□□□□ -2.17
PTCH1-223ENST00000551623 TFPI2P48307 235 aa1.49□□□□□ -2.17
PTCH1-223ENST00000551623 HOXA1P49639 335 aaPredicted RBP1.49□□□□□ -2.17
PTCH1-223ENST00000551623 NUDT2P50583 147 aa1.49□□□□□ -2.17
PTCH1-223ENST00000551623 HCCSP53701 268 aa1.49□□□□□ -2.17
PTCH1-223ENST00000551623 DEFB131AP59861 70 aa1.49□□□□□ -2.17
PTCH1-223ENST00000551623 CXCR4P61073 352 aa1.49□□□□□ -2.17
PTCH1-223ENST00000551623 NUTF2P61970 127 aaKnown RBP1.49□□□□□ -2.17
PTCH1-223ENST00000551623 CDK5Q00535 292 aa1.49□□□□□ -2.17
PTCH1-223ENST00000551623 CDK10Q15131 360 aa1.49□□□□□ -2.17
PTCH1-223ENST00000551623 ACOT6Q3I5F7 207 aaPredicted RBP1.49□□□□□ -2.17
PTCH1-223ENST00000551623 KCTD21Q4G0X4 260 aa1.49□□□□□ -2.17
PTCH1-223ENST00000551623 FAM98BQ52LJ0 330 aaKnown RBP1.49□□□□□ -2.17
PTCH1-223ENST00000551623 TMEM244Q5VVB8 128 aa1.49□□□□□ -2.17
PTCH1-223ENST00000551623 ZNF880Q6PDB4 577 aa1.49□□□□□ -2.17
PTCH1-223ENST00000551623 GLDNQ6ZMI3 551 aaPredicted RBP1.49□□□□□ -2.17
PTCH1-223ENST00000551623 SSX9Q7RTT3 188 aa1.49□□□□□ -2.17
PTCH1-223ENST00000551623 SCXQ7RTU7 201 aa1.49□□□□□ -2.17
PTCH1-223ENST00000551623 TMEM179BQ7Z7N9 219 aa1.49□□□□□ -2.17
PTCH1-223ENST00000551623 STHQ8IWL8 128 aa1.49□□□□□ -2.17
PTCH1-223ENST00000551623 MMD2Q8IY49 270 aa1.49□□□□□ -2.17
PTCH1-223ENST00000551623 STX19Q8N4C7 294 aa1.49□□□□□ -2.17
PTCH1-223ENST00000551623 CBR4Q8N4T8 237 aa1.49□□□□□ -2.17
PTCH1-223ENST00000551623 FAM24BQ8N5W8 94 aa1.49□□□□□ -2.17
PTCH1-223ENST00000551623 TCEANCQ8N8B7 351 aa1.49□□□□□ -2.17
PTCH1-223ENST00000551623 OR9Q2Q8NGE9 314 aa1.49□□□□□ -2.17
PTCH1-223ENST00000551623 OR5D18Q8NGL1 313 aa1.49□□□□□ -2.17
PTCH1-223ENST00000551623 OR5D14Q8NGL3 314 aa1.49□□□□□ -2.17
PTCH1-223ENST00000551623 OR13C9Q8NGT0 318 aa1.49□□□□□ -2.17
PTCH1-223ENST00000551623 OR2G2Q8NGZ5 317 aa1.49□□□□□ -2.17
PTCH1-223ENST00000551623 OR10AC1Q8NH08 325 aa1.49□□□□□ -2.17
PTCH1-223ENST00000551623 MRPL30Q8TCC3 161 aaKnown RBP1.49□□□□□ -2.17
PTCH1-223ENST00000551623 DCANP1Q8TF63 244 aa1.49□□□□□ -2.17
PTCH1-223ENST00000551623 RFT1Q96AA3 541 aa1.49□□□□□ -2.17
PTCH1-223ENST00000551623 FGGYQ96C11 551 aa1.49□□□□□ -2.17
PTCH1-223ENST00000551623 PELI1Q96FA3 418 aa1.49□□□□□ -2.17
PTCH1-223ENST00000551623 HARBI1Q96MB7 349 aa1.49□□□□□ -2.17
PTCH1-223ENST00000551623 LINC01600Q96MT4 127 aa1.49□□□□□ -2.17
PTCH1-223ENST00000551623 APOL4Q9BPW4 351 aa1.49□□□□□ -2.17
PTCH1-223ENST00000551623 KCTD14Q9BQ13 255 aaPredicted RBP1.49□□□□□ -2.17
PTCH1-223ENST00000551623 CHAC1Q9BUX1 264 aa1.49□□□□□ -2.17
PTCH1-223ENST00000551623 RHPN1-AS1Q9BWJ2 59 aa1.49□□□□□ -2.17
PTCH1-223ENST00000551623 OR51V1Q9H2C8 321 aa1.49□□□□□ -2.17
PTCH1-223ENST00000551623 MS4A6AQ9H2W1 248 aa1.49□□□□□ -2.17
PTCH1-223ENST00000551623 ZNF430Q9H8G1 570 aaPredicted RBP1.49□□□□□ -2.17
PTCH1-223ENST00000551623 SLC35D1Q9NTN3 355 aa1.49□□□□□ -2.17
PTCH1-223ENST00000551623 ARMC1Q9NVT9 282 aa1.49□□□□□ -2.17
PTCH1-223ENST00000551623 PAK1IP1Q9NWT1 392 aaPredicted RBP1.49□□□□□ -2.17
PTCH1-223ENST00000551623 ZNF586Q9NXT0 402 aa1.49□□□□□ -2.17
PTCH1-223ENST00000551623 IKZF2Q9UKS7 526 aa1.49□□□□□ -2.17
PTCH1-223ENST00000551623 TRAPPC2LQ9UL33 140 aa1.49□□□□□ -2.17
PTCH1-223ENST00000551623 HSF4Q9ULV5 492 aa1.49□□□□□ -2.17
PTCH1-223ENST00000551623 SELENOKQ9Y6D0 94 aa1.49□□□□□ -2.17
PTCH1-223ENST00000551623 A0A1W2PQL4 384 aaPredicted RBP1.48□□□□□ -2.17
PTCH1-223ENST00000551623 IGLC7A0M8Q6 106 aa1.48□□□□□ -2.17
PTCH1-223ENST00000551623 PLAC8L1A1L4L8 177 aa1.48□□□□□ -2.17
PTCH1-223ENST00000551623 METTL15A6NJ78 407 aa1.48□□□□□ -2.17
PTCH1-223ENST00000551623 OR4C45A6NMZ5 311 aa1.48□□□□□ -2.17
PTCH1-223ENST00000551623 MCRIP1C9JLW8 97 aa1.48□□□□□ -2.17
PTCH1-223ENST00000551623 E7EUB6 86 aa1.48□□□□□ -2.17
PTCH1-223ENST00000551623 H3BMM0 161 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms