RNA–Protein interactions for RNA: ENST00000550611.1

LIMA1-206, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-206ENST00000550611 OCMP0CE72 109 aaPredicted RBP2.6□□□□□ -1.99
LIMA1-206ENST00000550611 SAA2P0DJI9 122 aaPredicted RBP2.6□□□□□ -1.99
LIMA1-206ENST00000550611 INAFM2P0DMQ5 153 aa2.6□□□□□ -1.99
LIMA1-206ENST00000550611 ZNF19P17023 458 aa2.6□□□□□ -1.99
LIMA1-206ENST00000550611 IGFBP3P17936 291 aaPredicted RBP2.6□□□□□ -1.99
LIMA1-206ENST00000550611 RAB3AP20336 220 aa2.6□□□□□ -1.99
LIMA1-206ENST00000550611 GALP22466 123 aa2.6□□□□□ -1.99
LIMA1-206ENST00000550611 AADACP22760 399 aa2.6□□□□□ -1.99
LIMA1-206ENST00000550611 CD40LGP29965 261 aa2.6□□□□□ -1.99
LIMA1-206ENST00000550611 PPP1CCP36873 323 aaKnown RBP2.6□□□□□ -1.99
LIMA1-206ENST00000550611 HOXA1P49639 335 aaPredicted RBP2.6□□□□□ -1.99
LIMA1-206ENST00000550611 EIF2B2P49770 351 aaKnown RBP2.6□□□□□ -1.99
LIMA1-206ENST00000550611 GNG2P59768 71 aa2.6□□□□□ -1.99
LIMA1-206ENST00000550611 FXYD3Q14802 87 aa2.6□□□□□ -1.99
LIMA1-206ENST00000550611 RSU1Q15404 277 aa2.6□□□□□ -1.99
LIMA1-206ENST00000550611 SAPCD1Q5SSQ6 148 aa2.6□□□□□ -1.99
LIMA1-206ENST00000550611 ATAD3CQ5T2N8 411 aa2.6□□□□□ -1.99
LIMA1-206ENST00000550611 HES5Q5TA89 166 aa2.6□□□□□ -1.99
LIMA1-206ENST00000550611 LPCAT4Q643R3 524 aa2.6□□□□□ -1.99
LIMA1-206ENST00000550611 DMKNQ6E0U4 476 aaPredicted RBP2.6□□□□□ -1.99
LIMA1-206ENST00000550611 FAM131AQ6UXB0 335 aa2.6□□□□□ -1.99
LIMA1-206ENST00000550611 KRTAP5-5Q701N2 237 aaPredicted RBP2.6□□□□□ -1.99
LIMA1-206ENST00000550611 FAM220AQ7Z4H9 259 aa2.6□□□□□ -1.99
LIMA1-206ENST00000550611 LYG2Q86SG7 212 aa2.6□□□□□ -1.99
LIMA1-206ENST00000550611 SYS1Q8N2H4 156 aa2.6□□□□□ -1.99
LIMA1-206ENST00000550611 STX19Q8N4C7 294 aa2.6□□□□□ -1.99
LIMA1-206ENST00000550611 ZNF645Q8N7E2 425 aa2.6□□□□□ -1.99
LIMA1-206ENST00000550611 THAP8Q8NA92 274 aa2.6□□□□□ -1.99
LIMA1-206ENST00000550611 OR5T1Q8NG75 326 aa2.6□□□□□ -1.99
LIMA1-206ENST00000550611 OR11H4Q8NGC9 324 aa2.6□□□□□ -1.99
LIMA1-206ENST00000550611 MRPL30Q8TCC3 161 aaKnown RBP2.6□□□□□ -1.99
LIMA1-206ENST00000550611 PHLDA1Q8WV24 401 aaPredicted RBP2.6□□□□□ -1.99
LIMA1-206ENST00000550611 TRUB1Q8WWH5 349 aaKnown RBP2.6□□□□□ -1.99
LIMA1-206ENST00000550611 MRPS24Q96EL2 167 aaKnown RBP2.6□□□□□ -1.99
LIMA1-206ENST00000550611 BSCL2Q96G97 398 aaPredicted RBP2.6□□□□□ -1.99
LIMA1-206ENST00000550611 USMG5Q96IX5 58 aa2.6□□□□□ -1.99
LIMA1-206ENST00000550611 ST6GAL2Q96JF0 529 aa2.6□□□□□ -1.99
LIMA1-206ENST00000550611 C4orf36Q96KX1 117 aa2.6□□□□□ -1.99
LIMA1-206ENST00000550611 SGK494Q96LW2 274 aa2.6□□□□□ -1.99
LIMA1-206ENST00000550611 C17orf77Q96MU5 243 aa2.6□□□□□ -1.99
LIMA1-206ENST00000550611 CLCC1Q96S66 551 aa2.6□□□□□ -1.99
LIMA1-206ENST00000550611 PDCD1LG2Q9BQ51 273 aa2.6□□□□□ -1.99
LIMA1-206ENST00000550611 AGMATQ9BSE5 352 aa2.6□□□□□ -1.99
LIMA1-206ENST00000550611 GGTLC1Q9BX51 225 aa2.6□□□□□ -1.99
LIMA1-206ENST00000550611 GABARAPL1Q9H0R8 117 aa2.6□□□□□ -1.99
LIMA1-206ENST00000550611 ISG20L2Q9H9L3 353 aaKnown RBP2.6□□□□□ -1.99
LIMA1-206ENST00000550611 SPACA1Q9HBV2 294 aa2.6□□□□□ -1.99
LIMA1-206ENST00000550611 RAB9BQ9NP90 201 aa2.6□□□□□ -1.99
LIMA1-206ENST00000550611 NUDT15Q9NV35 164 aa2.6□□□□□ -1.99
LIMA1-206ENST00000550611 SLC2A8Q9NY64 477 aa2.6□□□□□ -1.99
LIMA1-206ENST00000550611 TECRQ9NZ01 308 aaKnown RBP2.6□□□□□ -1.99
LIMA1-206ENST00000550611 METTL1Q9UBP6 276 aaKnown RBP2.6□□□□□ -1.99
LIMA1-206ENST00000550611 TRAPPC2LQ9UL33 140 aa2.6□□□□□ -1.99
LIMA1-206ENST00000550611 ING4Q9UNL4 249 aa2.6□□□□□ -1.99
LIMA1-206ENST00000550611 ARL2BPQ9Y2Y0 163 aa2.6□□□□□ -1.99
LIMA1-206ENST00000550611 LRRC42Q9Y546 428 aa2.6□□□□□ -1.99
LIMA1-206ENST00000550611 LOC102724200A0A096LPH7 203 aaPredicted RBP2.59□□□□□ -1.99
LIMA1-206ENST00000550611 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.59□□□□□ -1.99
LIMA1-206ENST00000550611 TRBV9A0A0B4J1U6 114 aa2.59□□□□□ -1.99
LIMA1-206ENST00000550611 A0A1W2PS18 150 aa2.59□□□□□ -1.99
LIMA1-206ENST00000550611 DAPL1A0PJW8 107 aa2.59□□□□□ -1.99
LIMA1-206ENST00000550611 EFCAB10A6NFE3 127 aa2.59□□□□□ -1.99
LIMA1-206ENST00000550611 OR5H14A6NHG9 310 aa2.59□□□□□ -1.99
LIMA1-206ENST00000550611 C2orf70A6NJV1 201 aa2.59□□□□□ -1.99
LIMA1-206ENST00000550611 TMEM212A6NML5 194 aa2.59□□□□□ -1.99
LIMA1-206ENST00000550611 G3V2T6 193 aa2.59□□□□□ -1.99
LIMA1-206ENST00000550611 LGALS9O00182 355 aa2.59□□□□□ -1.99
LIMA1-206ENST00000550611 RAB29O14966 203 aa2.59□□□□□ -1.99
LIMA1-206ENST00000550611 SLC22A1O15245 554 aa2.59□□□□□ -1.99
LIMA1-206ENST00000550611 SNAPINO95295 136 aa2.59□□□□□ -1.99
LIMA1-206ENST00000550611 MAS1P04201 325 aa2.59□□□□□ -1.99
LIMA1-206ENST00000550611 IGKV1-16P04430 117 aa2.59□□□□□ -1.99
LIMA1-206ENST00000550611 GTF2F2P13984 249 aa2.59□□□□□ -1.99
LIMA1-206ENST00000550611 FOLR2P14207 255 aa2.59□□□□□ -1.99
LIMA1-206ENST00000550611 FUT3P21217 361 aa2.59□□□□□ -1.99
LIMA1-206ENST00000550611 FASP25445 335 aa2.59□□□□□ -1.99
LIMA1-206ENST00000550611 ZNF93P35789 620 aaPredicted RBP2.59□□□□□ -1.99
LIMA1-206ENST00000550611 SNRPGP62308 76 aaKnown RBP2.59□□□□□ -1.99
LIMA1-206ENST00000550611 ZNF45Q02386 682 aa2.59□□□□□ -1.99
LIMA1-206ENST00000550611 PJVKQ0ZLH3 352 aa2.59□□□□□ -1.99
LIMA1-206ENST00000550611 HMGN3Q15651 99 aa2.59□□□□□ -1.99
LIMA1-206ENST00000550611 RPEL1Q2QD12 228 aa2.59□□□□□ -1.99
LIMA1-206ENST00000550611 KLK9Q2XQG4 91 aa2.59□□□□□ -1.99
LIMA1-206ENST00000550611 C2orf76Q3KRA6 126 aa2.59□□□□□ -1.99
LIMA1-206ENST00000550611 KCTD21Q4G0X4 260 aa2.59□□□□□ -1.99
LIMA1-206ENST00000550611 LBHQ53QV2 105 aaPredicted RBP2.59□□□□□ -1.99
LIMA1-206ENST00000550611 RPL39P5Q59GN2 51 aa2.59□□□□□ -1.99
LIMA1-206ENST00000550611 C1orf146Q5VVC0 180 aa2.59□□□□□ -1.99
LIMA1-206ENST00000550611 ZNF880Q6PDB4 577 aa2.59□□□□□ -1.99
LIMA1-206ENST00000550611 LINC00336Q6ZUF6 198 aa2.59□□□□□ -1.99
LIMA1-206ENST00000550611 LHFPL3Q86UP9 236 aa2.59□□□□□ -1.99
LIMA1-206ENST00000550611 LINC00518Q8N0U6 118 aa2.59□□□□□ -1.99
LIMA1-206ENST00000550611 ACBD7Q8N6N7 88 aa2.59□□□□□ -1.99
LIMA1-206ENST00000550611 ZNF383Q8NA42 475 aa2.59□□□□□ -1.99
LIMA1-206ENST00000550611 ADAD2Q8NCV1 583 aaKnown RBP2.59□□□□□ -1.99
LIMA1-206ENST00000550611 OR5AK2Q8NH90 309 aa2.59□□□□□ -1.99
LIMA1-206ENST00000550611 FAM46BQ96A09 425 aa2.59□□□□□ -1.99
LIMA1-206ENST00000550611 GALMQ96C23 342 aa2.59□□□□□ -1.99
LIMA1-206ENST00000550611 CCDC124Q96CT7 223 aaKnown RBP2.59□□□□□ -1.99
LIMA1-206ENST00000550611 LGALS12Q96DT0 336 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms