RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 MSGN1A6NI15 193 aa10.22□□□□□ -0.77
NR4A1-215ENST00000550557 ZNF735P0CB33 412 aa10.22□□□□□ -0.77
NR4A1-215ENST00000550557 AMTP48728 403 aa10.22□□□□□ -0.77
NR4A1-215ENST00000550557 SERF2P84101 59 aa10.22□□□□□ -0.77
NR4A1-215ENST00000550557 WDR25Q64LD2 544 aaPredicted RBP10.22□□□□□ -0.77
NR4A1-215ENST00000550557 RNASEKQ6P5S7 137 aaKnown RBP10.22□□□□□ -0.77
NR4A1-215ENST00000550557 TXNDC17Q9BRA2 123 aa10.22□□□□□ -0.77
NR4A1-215ENST00000550557 Q71RC1 249 aaPredicted RBP10.21□□□□□ -0.77
NR4A1-215ENST00000550557 PRSS3P2Q8NHM4 247 aa10.21□□□□□ -0.77
NR4A1-215ENST00000550557 HEATR5AQ86XA9 2040 aa10.21□□□□□ -0.77
NR4A1-215ENST00000550557 IGHV3-11P01762 117 aa10.21□□□□□ -0.77
NR4A1-215ENST00000550557 RPL29P47914 159 aaKnown RBP10.21□□□□□ -0.77
NR4A1-215ENST00000550557 SNRPD3P62318 126 aaKnown RBP10.21□□□□□ -0.77
NR4A1-215ENST00000550557 TMEM78Q5T7P6 136 aa10.21□□□□□ -0.77
NR4A1-215ENST00000550557 MAPK1IP1LQ8NDC0 245 aa10.21□□□□□ -0.77
NR4A1-215ENST00000550557 ARPC1AQ92747 370 aa10.21□□□□□ -0.77
NR4A1-215ENST00000550557 GSX1Q9H4S2 264 aaPredicted RBP10.21□□□□□ -0.77
NR4A1-215ENST00000550557 UFC1Q9Y3C8 167 aa10.21□□□□□ -0.77
NR4A1-215ENST00000550557 C11orf94C9JXX5 98 aa10.21□□□□□ -0.78
NR4A1-215ENST00000550557 WNT2P09544 360 aa10.21□□□□□ -0.78
NR4A1-215ENST00000550557 FCGR2BP31994 310 aaPredicted RBP10.21□□□□□ -0.78
NR4A1-215ENST00000550557 NUTF2P61970 127 aaKnown RBP10.21□□□□□ -0.78
NR4A1-215ENST00000550557 C1QL2Q7Z5L3 287 aa10.21□□□□□ -0.78
NR4A1-215ENST00000550557 H1FOOQ8IZA3 346 aaPredicted RBP10.21□□□□□ -0.78
NR4A1-215ENST00000550557 VKORC1L1Q8N0U8 176 aa10.21□□□□□ -0.78
NR4A1-215ENST00000550557 FBXL7Q9UJT9 491 aa10.21□□□□□ -0.78
NR4A1-215ENST00000550557 TP53BP1Q12888 1972 aaPredicted RBP10.21□□□□□ -0.78
NR4A1-215ENST00000550557 E7EQL1 145 aa10.21□□□□□ -0.78
NR4A1-215ENST00000550557 LINC00869P0C866 280 aa10.21□□□□□ -0.78
NR4A1-215ENST00000550557 CD1BP29016 333 aa10.21□□□□□ -0.78
NR4A1-215ENST00000550557 TMEM204Q9BSN7 226 aa10.21□□□□□ -0.78
NR4A1-215ENST00000550557 S1PR2O95136 353 aa10.2□□□□□ -0.78
NR4A1-215ENST00000550557 ACAA1P09110 424 aaPredicted RBP10.2□□□□□ -0.78
NR4A1-215ENST00000550557 CD24P25063 80 aa10.2□□□□□ -0.78
NR4A1-215ENST00000550557 ELOBQ15370 118 aa10.2□□□□□ -0.78
NR4A1-215ENST00000550557 ADIPOQQ15848 244 aa10.2□□□□□ -0.78
NR4A1-215ENST00000550557 HIST1H2BAQ96A08 127 aa10.2□□□□□ -0.78
NR4A1-215ENST00000550557 PACRGQ96M98 296 aaPredicted RBP10.2□□□□□ -0.78
NR4A1-215ENST00000550557 GPHA2Q96T91 129 aa10.2□□□□□ -0.78
NR4A1-215ENST00000550557 TMEM222Q9H0R3 208 aa10.2□□□□□ -0.78
NR4A1-215ENST00000550557 A0A087X0M5 115 aa10.2□□□□□ -0.78
NR4A1-215ENST00000550557 A0A1B0GX30 115 aa10.2□□□□□ -0.78
NR4A1-215ENST00000550557 TMEM178BH3BS89 294 aa10.2□□□□□ -0.78
NR4A1-215ENST00000550557 CEACAM8P31997 349 aaPredicted RBP10.2□□□□□ -0.78
NR4A1-215ENST00000550557 OR10S1Q8NGN2 331 aa10.2□□□□□ -0.78
NR4A1-215ENST00000550557 PRO1933Q9H354 126 aa10.2□□□□□ -0.78
NR4A1-215ENST00000550557 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.2□□□□□ -0.78
NR4A1-215ENST00000550557 ZNF430Q9H8G1 570 aaPredicted RBP10.2□□□□□ -0.78
NR4A1-215ENST00000550557 PEMTQ9UBM1 199 aa10.2□□□□□ -0.78
NR4A1-215ENST00000550557 TCF19Q9Y242 345 aa10.2□□□□□ -0.78
NR4A1-215ENST00000550557 CBY3A6NI87 242 aa10.19□□□□□ -0.78
NR4A1-215ENST00000550557 DANCRP0C864 163 aa10.19□□□□□ -0.78
NR4A1-215ENST00000550557 CCL1P22362 96 aa10.19□□□□□ -0.78
NR4A1-215ENST00000550557 BRD3OSQ6XYD6 125 aa10.19□□□□□ -0.78
NR4A1-215ENST00000550557 BPIFA4PQ86YQ2 179 aa10.19□□□□□ -0.78
NR4A1-215ENST00000550557 PAQR4Q8N4S7 273 aaPredicted RBP10.19□□□□□ -0.78
NR4A1-215ENST00000550557 ZNF383Q8NA42 475 aa10.19□□□□□ -0.78
NR4A1-215ENST00000550557 TM2D1Q9BX74 207 aa10.19□□□□□ -0.78
NR4A1-215ENST00000550557 MRPL20Q9BYC9 149 aaKnown RBP10.19□□□□□ -0.78
NR4A1-215ENST00000550557 ZNF253O75346 499 aa10.19□□□□□ -0.78
NR4A1-215ENST00000550557 PLAUP00749 431 aa10.19□□□□□ -0.78
NR4A1-215ENST00000550557 HLA-DRB5Q30154 266 aa10.19□□□□□ -0.78
NR4A1-215ENST00000550557 KIF26AQ9ULI4 1882 aaPredicted RBP10.19□□□□□ -0.78
NR4A1-215ENST00000550557 IGHV3OR16-13A0A075B7E8 117 aa10.19□□□□□ -0.78
NR4A1-215ENST00000550557 IGHV3-74A0A0B4J1X5 117 aa10.19□□□□□ -0.78
NR4A1-215ENST00000550557 NBR2O15453 112 aa10.19□□□□□ -0.78
NR4A1-215ENST00000550557 RAB9AP51151 201 aa10.19□□□□□ -0.78
NR4A1-215ENST00000550557 TMEM97Q5BJF2 176 aa10.19□□□□□ -0.78
NR4A1-215ENST00000550557 ASPHD2Q6ICH7 369 aa10.19□□□□□ -0.78
NR4A1-215ENST00000550557 C2orf16Q68DN1 1984 aa10.19□□□□□ -0.78
NR4A1-215ENST00000550557 FAM181BA6NEQ2 426 aa10.19□□□□□ -0.78
NR4A1-215ENST00000550557 MPZP25189 248 aa10.19□□□□□ -0.78
NR4A1-215ENST00000550557 PKIAP61925 76 aa10.19□□□□□ -0.78
NR4A1-215ENST00000550557 SMIM8Q96KF7 97 aa10.19□□□□□ -0.78
NR4A1-215ENST00000550557 RTBDNQ9BSG5 229 aaPredicted RBP10.19□□□□□ -0.78
NR4A1-215ENST00000550557 SONP18583 2426 aaKnown RBP10.19□□□□□ -0.78
NR4A1-215ENST00000550557 HELTA6NFD8 242 aa10.18□□□□□ -0.78
NR4A1-215ENST00000550557 OR2T8A6NH00 312 aa10.18□□□□□ -0.78
NR4A1-215ENST00000550557 SNRPCP09234 159 aaKnown RBP10.18□□□□□ -0.78
NR4A1-215ENST00000550557 OR5AL1P0C617 328 aa10.18□□□□□ -0.78
NR4A1-215ENST00000550557 COL8A1P27658 744 aa10.18□□□□□ -0.78
NR4A1-215ENST00000550557 SRRM5B3KS81 715 aa10.18□□□□□ -0.78
NR4A1-215ENST00000550557 F8VVB4 439 aa10.18□□□□□ -0.78
NR4A1-215ENST00000550557 F8VWA3 439 aa10.18□□□□□ -0.78
NR4A1-215ENST00000550557 FGF16O43320 207 aa10.18□□□□□ -0.78
NR4A1-215ENST00000550557 CYB561D1Q8N8Q1 229 aa10.18□□□□□ -0.78
NR4A1-215ENST00000550557 C5orf17Q8NAS9 161 aa10.18□□□□□ -0.78
NR4A1-215ENST00000550557 PAXXQ9BUH6 204 aa10.18□□□□□ -0.78
NR4A1-215ENST00000550557 RNF126Q9BV68 326 aa10.18□□□□□ -0.78
NR4A1-215ENST00000550557 K7EM74 188 aa10.18□□□□□ -0.78
NR4A1-215ENST00000550557 FAM3BP58499 235 aaPredicted RBP10.18□□□□□ -0.78
NR4A1-215ENST00000550557 SH3BGRL3Q9H299 93 aa10.18□□□□□ -0.78
NR4A1-215ENST00000550557 IL36RNQ9UBH0 155 aa10.18□□□□□ -0.78
NR4A1-215ENST00000550557 IGSF23A1L1A6 192 aa10.18□□□□□ -0.78
NR4A1-215ENST00000550557 CGB1A6NKQ9 187 aa10.18□□□□□ -0.78
NR4A1-215ENST00000550557 CXorf1O96002 111 aa10.18□□□□□ -0.78
NR4A1-215ENST00000550557 RPL7P18124 248 aaKnown RBP10.18□□□□□ -0.78
NR4A1-215ENST00000550557 TMEM187Q14656 261 aa10.18□□□□□ -0.78
NR4A1-215ENST00000550557 MYO18BQ8IUG5 2567 aa10.17□□□□□ -0.78
NR4A1-215ENST00000550557 SRSF3P84103 164 aaKnown RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms