RNA–Protein interactions for RNA: ENST00000550391.5

CACNB3-216, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-216ENST00000550391 CA2P00918 260 aa11.2□□□□□ -0.62
CACNB3-216ENST00000550391 LYL1P12980 280 aa11.2□□□□□ -0.62
CACNB3-216ENST00000550391 MYOD1P15172 320 aa11.2□□□□□ -0.62
CACNB3-216ENST00000550391 PVALBP20472 110 aaPredicted RBP11.2□□□□□ -0.62
CACNB3-216ENST00000550391 RPL27AP46776 148 aaKnown RBP11.2□□□□□ -0.62
CACNB3-216ENST00000550391 COMPP49747 757 aaPredicted RBP11.2□□□□□ -0.62
CACNB3-216ENST00000550391 GNB1P62873 340 aa11.2□□□□□ -0.62
CACNB3-216ENST00000550391 VAMP2P63027 116 aa11.2□□□□□ -0.62
CACNB3-216ENST00000550391 PRCDQ00LT1 54 aa11.2□□□□□ -0.62
CACNB3-216ENST00000550391 TNXAQ16473 311 aa11.2□□□□□ -0.62
CACNB3-216ENST00000550391 ZFP69Q49AA0 526 aa11.2□□□□□ -0.62
CACNB3-216ENST00000550391 ZNF562Q6V9R5 426 aa11.2□□□□□ -0.62
CACNB3-216ENST00000550391 TMEM86BQ8N661 226 aa11.2□□□□□ -0.62
CACNB3-216ENST00000550391 C5orf56Q8N8D9 126 aa11.2□□□□□ -0.62
CACNB3-216ENST00000550391 RAB40CQ96S21 281 aa11.2□□□□□ -0.62
CACNB3-216ENST00000550391 MBD2Q9UBB5 411 aa11.2□□□□□ -0.62
CACNB3-216ENST00000550391 TGP01266 2768 aa11.2□□□□□ -0.62
CACNB3-216ENST00000550391 E5RGE8 158 aa11.19□□□□□ -0.62
CACNB3-216ENST00000550391 LY86O95711 162 aa11.19□□□□□ -0.62
CACNB3-216ENST00000550391 HLA-DRB1P01911 266 aa11.19□□□□□ -0.62
CACNB3-216ENST00000550391 OPN1MWP04001 364 aa11.19□□□□□ -0.62
CACNB3-216ENST00000550391 FAM157CP0CG43 387 aa11.19□□□□□ -0.62
CACNB3-216ENST00000550391 OPN1MW2P0DN77 364 aa11.19□□□□□ -0.62
CACNB3-216ENST00000550391 OPN1MW3P0DN78 364 aa11.19□□□□□ -0.62
CACNB3-216ENST00000550391 SSBP2P81877 361 aaPredicted RBP11.19□□□□□ -0.62
CACNB3-216ENST00000550391 SPINK9Q5DT21 86 aa11.19□□□□□ -0.62
CACNB3-216ENST00000550391 DTD1Q8TEA8 209 aa11.19□□□□□ -0.62
CACNB3-216ENST00000550391 SMIM8Q96KF7 97 aa11.19□□□□□ -0.62
CACNB3-216ENST00000550391 CIB3Q96Q77 187 aaPredicted RBP11.19□□□□□ -0.62
CACNB3-216ENST00000550391 HINT2Q9BX68 163 aa11.19□□□□□ -0.62
CACNB3-216ENST00000550391 PLEKHA3Q9HB20 300 aa11.19□□□□□ -0.62
CACNB3-216ENST00000550391 ENY2Q9NPA8 101 aa11.19□□□□□ -0.62
CACNB3-216ENST00000550391 NDUFA4L2Q9NRX3 87 aa11.19□□□□□ -0.62
CACNB3-216ENST00000550391 OR5AC2Q9NZP5 309 aa11.19□□□□□ -0.62
CACNB3-216ENST00000550391 VPREB3Q9UKI3 123 aa11.19□□□□□ -0.62
CACNB3-216ENST00000550391 FXYD6-FXYD2A0A087WZ82 144 aa11.18□□□□□ -0.62
CACNB3-216ENST00000550391 A0A1W2PN81 502 aa11.18□□□□□ -0.62
CACNB3-216ENST00000550391 CGB1A6NKQ9 187 aa11.18□□□□□ -0.62
CACNB3-216ENST00000550391 GPR137BO60478 399 aa11.18□□□□□ -0.62
CACNB3-216ENST00000550391 AMY1AP04745 511 aa11.18□□□□□ -0.62
CACNB3-216ENST00000550391 HNRNPCP07910 306 aaKnown RBP eCLIP11.18□□□□□ -0.62
CACNB3-216ENST00000550391 IAPPP10997 89 aa11.18□□□□□ -0.62
CACNB3-216ENST00000550391 CHRNA7P36544 502 aa11.18□□□□□ -0.62
CACNB3-216ENST00000550391 HOXA1P49639 335 aaPredicted RBP11.18□□□□□ -0.62
CACNB3-216ENST00000550391 TAS2R30P59541 319 aa11.18□□□□□ -0.62
CACNB3-216ENST00000550391 CX3CL1P78423 397 aa11.18□□□□□ -0.62
CACNB3-216ENST00000550391 FXYD3Q14802 87 aa11.18□□□□□ -0.62
CACNB3-216ENST00000550391 C10orf55Q5SWW7 151 aa11.18□□□□□ -0.62
CACNB3-216ENST00000550391 TMEM65Q6PI78 240 aa11.18□□□□□ -0.62
CACNB3-216ENST00000550391 NOXA1Q86UR1 476 aa11.18□□□□□ -0.62
CACNB3-216ENST00000550391 MRPL41Q8IXM3 137 aaKnown RBP11.18□□□□□ -0.62
CACNB3-216ENST00000550391 OR11H4Q8NGC9 324 aa11.18□□□□□ -0.62
CACNB3-216ENST00000550391 SRSF12Q8WXF0 261 aaKnown RBP11.18□□□□□ -0.62
CACNB3-216ENST00000550391 DCUN1D4Q92564 292 aa11.18□□□□□ -0.62
CACNB3-216ENST00000550391 HYLS1Q96M11 299 aa11.18□□□□□ -0.62
CACNB3-216ENST00000550391 HIPK2Q9H2X6 1198 aa11.18□□□□□ -0.62
CACNB3-216ENST00000550391 C11orf1Q9H5F2 150 aa11.18□□□□□ -0.62
CACNB3-216ENST00000550391 TNFRSF19Q9NS68 423 aa11.18□□□□□ -0.62
CACNB3-216ENST00000550391 PLXNB1O43157 2135 aa11.18□□□□□ -0.62
CACNB3-216ENST00000550391 IGHV7-81A0A0B4J1V7 117 aa11.17□□□□□ -0.62
CACNB3-216ENST00000550391 HMSDA8MTL9 139 aa11.17□□□□□ -0.62
CACNB3-216ENST00000550391 E7EUB6 86 aa11.17□□□□□ -0.62
CACNB3-216ENST00000550391 INS-IGF2F8WCM5 200 aa11.17□□□□□ -0.62
CACNB3-216ENST00000550391 VDAC2P45880 294 aaPredicted RBP11.17□□□□□ -0.62
CACNB3-216ENST00000550391 P2RY1P47900 373 aa11.17□□□□□ -0.62
CACNB3-216ENST00000550391 RPL23AP62750 156 aaKnown RBP11.17□□□□□ -0.62
CACNB3-216ENST00000550391 ZNF546Q86UE3 836 aa11.17□□□□□ -0.62
CACNB3-216ENST00000550391 ZNF418Q8TF45 676 aaPredicted RBP11.17□□□□□ -0.62
CACNB3-216ENST00000550391 ARPC1AQ92747 370 aa11.17□□□□□ -0.62
CACNB3-216ENST00000550391 SRSF8Q9BRL6 282 aaKnown RBP11.17□□□□□ -0.62
CACNB3-216ENST00000550391 HEYLQ9NQ87 328 aaPredicted RBP11.17□□□□□ -0.62
CACNB3-216ENST00000550391 PSENENQ9NZ42 101 aa11.17□□□□□ -0.62
CACNB3-216ENST00000550391 WSB1Q9Y6I7 421 aa11.17□□□□□ -0.62
CACNB3-216ENST00000550391 A0A1B0GW64 132 aa11.16□□□□□ -0.62
CACNB3-216ENST00000550391 MSGN1A6NI15 193 aa11.16□□□□□ -0.62
CACNB3-216ENST00000550391 TSC22D2O75157 780 aa11.16□□□□□ -0.62
CACNB3-216ENST00000550391 TMEM50AO95807 157 aa11.16□□□□□ -0.62
CACNB3-216ENST00000550391 NUP62P37198 522 aaPredicted RBP11.16□□□□□ -0.62
CACNB3-216ENST00000550391 PAX9P55771 341 aa11.16□□□□□ -0.62
CACNB3-216ENST00000550391 ERHP84090 104 aaKnown RBP11.16□□□□□ -0.62
CACNB3-216ENST00000550391 HSD17B13Q7Z5P4 300 aaPredicted RBP11.16□□□□□ -0.62
CACNB3-216ENST00000550391 OR10W1Q8NGF6 305 aa11.16□□□□□ -0.62
CACNB3-216ENST00000550391 GRPEL2Q8TAA5 225 aa11.16□□□□□ -0.62
CACNB3-216ENST00000550391 HSPB9Q9BQS6 159 aa11.16□□□□□ -0.62
CACNB3-216ENST00000550391 DNAJC9-AS1A6NH13 148 aa11.15□□□□□ -0.62
CACNB3-216ENST00000550391 TEX22C9J3V5 150 aa11.15□□□□□ -0.62
CACNB3-216ENST00000550391 BOLA2-SMG1P6H3BVE0 249 aa11.15□□□□□ -0.62
CACNB3-216ENST00000550391 RPP30P78346 268 aaKnown RBP11.15□□□□□ -0.62
CACNB3-216ENST00000550391 SPANXN5Q5MJ07 72 aa11.15□□□□□ -0.62
CACNB3-216ENST00000550391 OR2C3Q8N628 320 aa11.15□□□□□ -0.62
CACNB3-216ENST00000550391 INO80EQ8NBZ0 244 aaPredicted RBP11.15□□□□□ -0.62
CACNB3-216ENST00000550391 ABHD5Q8WTS1 349 aa11.15□□□□□ -0.62
CACNB3-216ENST00000550391 SLC25A31Q9H0C2 315 aa11.15□□□□□ -0.62
CACNB3-216ENST00000550391 LYRM2Q9NU23 88 aaPredicted RBP11.15□□□□□ -0.62
CACNB3-216ENST00000550391 TNFSF18Q9UNG2 199 aa11.15□□□□□ -0.62
CACNB3-216ENST00000550391 U3KQ87 197 aa11.15□□□□□ -0.62
CACNB3-216ENST00000550391 IGLC7A0M8Q6 106 aa11.14□□□□□ -0.63
CACNB3-216ENST00000550391 SH2D7A6NKC9 451 aaPredicted RBP11.14□□□□□ -0.63
CACNB3-216ENST00000550391 CLDN34H7C241 214 aa11.14□□□□□ -0.63
CACNB3-216ENST00000550391 ARPC5O15511 151 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms