RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 PIGPP57054 158 aa13.19□□□□□ -0.3
CHMP1A-208ENST00000550102 TATDN3Q17R31 274 aa13.19□□□□□ -0.3
CHMP1A-208ENST00000550102 KLK9Q2XQG4 91 aa13.19□□□□□ -0.3
CHMP1A-208ENST00000550102 CCDC71LQ8N9Z2 235 aa13.19□□□□□ -0.3
CHMP1A-208ENST00000550102 OR13C8Q8NGS7 320 aa13.19□□□□□ -0.3
CHMP1A-208ENST00000550102 ZFAND1Q8TCF1 268 aa13.19□□□□□ -0.3
CHMP1A-208ENST00000550102 NXF2Q9GZY0 626 aaKnown RBP13.19□□□□□ -0.3
CHMP1A-208ENST00000550102 KLK9Q9UKQ9 250 aa13.19□□□□□ -0.3
CHMP1A-208ENST00000550102 IGLV11-55A0A075B6I3 123 aa13.18□□□□□ -0.3
CHMP1A-208ENST00000550102 C15orf61A6NNL5 157 aa13.18□□□□□ -0.3
CHMP1A-208ENST00000550102 GSTZ1O43708 216 aaPredicted RBP13.18□□□□□ -0.3
CHMP1A-208ENST00000550102 AKAIN1P0CW23 69 aa13.18□□□□□ -0.3
CHMP1A-208ENST00000550102 FAAP20Q6NZ36 180 aa13.18□□□□□ -0.3
CHMP1A-208ENST00000550102 H2BFWTQ7Z2G1 175 aa13.18□□□□□ -0.3
CHMP1A-208ENST00000550102 GDPD1Q8N9F7 314 aa13.18□□□□□ -0.3
CHMP1A-208ENST00000550102 OR10W1Q8NGF6 305 aa13.18□□□□□ -0.3
CHMP1A-208ENST00000550102 OR5B3Q8NH48 314 aa13.18□□□□□ -0.3
CHMP1A-208ENST00000550102 LSM10Q969L4 123 aaKnown RBP13.18□□□□□ -0.3
CHMP1A-208ENST00000550102 MRGPRFQ96AM1 343 aa13.18□□□□□ -0.3
CHMP1A-208ENST00000550102 EEF1AKMT3Q96AZ1 226 aa13.18□□□□□ -0.3
CHMP1A-208ENST00000550102 SEC22AQ96IW7 307 aa13.18□□□□□ -0.3
CHMP1A-208ENST00000550102 HINT2Q9BX68 163 aa13.18□□□□□ -0.3
CHMP1A-208ENST00000550102 TMEM14BQ9NUH8 114 aa13.18□□□□□ -0.3
CHMP1A-208ENST00000550102 FKBP11Q9NYL4 201 aa13.18□□□□□ -0.3
CHMP1A-208ENST00000550102 COPZ2Q9P299 210 aa13.18□□□□□ -0.3
CHMP1A-208ENST00000550102 NSG2Q9Y328 171 aa13.18□□□□□ -0.3
CHMP1A-208ENST00000550102 OR51B2Q9Y5P1 312 aa13.18□□□□□ -0.3
CHMP1A-208ENST00000550102 TEX50A0A1B0GTY4 177 aa13.17□□□□□ -0.3
CHMP1A-208ENST00000550102 DISC1C4P0D8 188 aa13.17□□□□□ -0.3
CHMP1A-208ENST00000550102 NDUFB8O95169 186 aa13.17□□□□□ -0.3
CHMP1A-208ENST00000550102 IGKV1-39P01597 117 aa13.17□□□□□ -0.3
CHMP1A-208ENST00000550102 IGKV1D-39P04432 117 aa13.17□□□□□ -0.3
CHMP1A-208ENST00000550102 SPNP16150 400 aa13.17□□□□□ -0.3
CHMP1A-208ENST00000550102 TNFSF8P32971 234 aa13.17□□□□□ -0.3
CHMP1A-208ENST00000550102 CD69Q07108 199 aa13.17□□□□□ -0.3
CHMP1A-208ENST00000550102 OR4C16Q8NGL9 310 aa13.17□□□□□ -0.3
CHMP1A-208ENST00000550102 MARCH1Q8TCQ1 289 aa13.17□□□□□ -0.3
CHMP1A-208ENST00000550102 CXorf58Q96LI9 332 aa13.17□□□□□ -0.3
CHMP1A-208ENST00000550102 CCDC140Q96MF4 163 aa13.17□□□□□ -0.3
CHMP1A-208ENST00000550102 B9D2Q9BPU9 175 aa13.17□□□□□ -0.3
CHMP1A-208ENST00000550102 RBM38Q9H0Z9 239 aaKnown RBP13.17□□□□□ -0.3
CHMP1A-208ENST00000550102 NDUFA4L2Q9NRX3 87 aa13.17□□□□□ -0.3
CHMP1A-208ENST00000550102 PEMTQ9UBM1 199 aa13.17□□□□□ -0.3
CHMP1A-208ENST00000550102 FABP12A6NFH5 140 aa13.16□□□□□ -0.3
CHMP1A-208ENST00000550102 PPP5D1E7EU14 171 aa13.16□□□□□ -0.3
CHMP1A-208ENST00000550102 IGLV1-51P01701 117 aa13.16□□□□□ -0.3
CHMP1A-208ENST00000550102 OR13C7P0DN81 318 aa13.16□□□□□ -0.3
CHMP1A-208ENST00000550102 WT1-ASQ06250 92 aa13.16□□□□□ -0.3
CHMP1A-208ENST00000550102 HAPLN4Q86UW8 402 aa13.16□□□□□ -0.3
CHMP1A-208ENST00000550102 TMEM56Q96MV1 263 aa13.16□□□□□ -0.3
CHMP1A-208ENST00000550102 TP53RKQ96S44 253 aa13.16□□□□□ -0.3
CHMP1A-208ENST00000550102 THYN1Q9P016 225 aa13.16□□□□□ -0.3
CHMP1A-208ENST00000550102 C14orf166Q9Y224 244 aaKnown RBP13.16□□□□□ -0.3
CHMP1A-208ENST00000550102 LSM4Q9Y4Z0 139 aaKnown RBP13.16□□□□□ -0.3
CHMP1A-208ENST00000550102 TRBV7-1A0A0A6YYK4 115 aa13.15□□□□□ -0.3
CHMP1A-208ENST00000550102 C3orf85A0A1B0GTC6 90 aa13.15□□□□□ -0.3
CHMP1A-208ENST00000550102 ANKRD20A5PA0PJZ0 165 aa13.15□□□□□ -0.3
CHMP1A-208ENST00000550102 MFSD2BA6NFX1 497 aa13.15□□□□□ -0.3
CHMP1A-208ENST00000550102 ZNF701M0R085 212 aaPredicted RBP13.15□□□□□ -0.3
CHMP1A-208ENST00000550102 GGCTO75223 188 aaKnown RBP13.15□□□□□ -0.3
CHMP1A-208ENST00000550102 B3GALNT1O75752 331 aa13.15□□□□□ -0.3
CHMP1A-208ENST00000550102 IGHV3-23P01764 117 aa13.15□□□□□ -0.3
CHMP1A-208ENST00000550102 CTSDP07339 412 aaPredicted RBP13.15□□□□□ -0.3
CHMP1A-208ENST00000550102 GP9P14770 177 aa13.15□□□□□ -0.3
CHMP1A-208ENST00000550102 ARL3P36405 182 aa13.15□□□□□ -0.3
CHMP1A-208ENST00000550102 MECP2P51608 486 aaKnown RBP13.15□□□□□ -0.3
CHMP1A-208ENST00000550102 AKR1C2P52895 323 aa13.15□□□□□ -0.3
CHMP1A-208ENST00000550102 SURF2Q15527 256 aaPredicted RBP13.15□□□□□ -0.3
CHMP1A-208ENST00000550102 CLEC19AQ6UXS0 136 aa13.15□□□□□ -0.3
CHMP1A-208ENST00000550102 OR4A16Q8NH70 328 aa13.15□□□□□ -0.3
CHMP1A-208ENST00000550102 PRRT1Q99946 306 aa13.15□□□□□ -0.3
CHMP1A-208ENST00000550102 S4R3C0 116 aa13.15□□□□□ -0.3
CHMP1A-208ENST00000550102 DBX1A6NMT0 343 aa13.14□□□□□ -0.31
CHMP1A-208ENST00000550102 ATG12O94817 140 aa13.14□□□□□ -0.31
CHMP1A-208ENST00000550102 TRIM16LQ309B1 348 aa13.14□□□□□ -0.31
CHMP1A-208ENST00000550102 IL34Q6ZMJ4 242 aa13.14□□□□□ -0.31
CHMP1A-208ENST00000550102 SOSTQ9BQB4 213 aa13.14□□□□□ -0.31
CHMP1A-208ENST00000550102 SIGLEC8Q9NYZ4 499 aa13.14□□□□□ -0.31
CHMP1A-208ENST00000550102 DMRT1Q9Y5R6 373 aa13.14□□□□□ -0.31
CHMP1A-208ENST00000550102 F11RQ9Y624 299 aaKnown RBP13.14□□□□□ -0.31
CHMP1A-208ENST00000550102 CSN3P07498 182 aa13.13□□□□□ -0.31
CHMP1A-208ENST00000550102 S100A5P33763 92 aa13.13□□□□□ -0.31
CHMP1A-208ENST00000550102 OR51S1Q8NGJ8 323 aa13.13□□□□□ -0.31
CHMP1A-208ENST00000550102 SLC2A8Q9NY64 477 aa13.13□□□□□ -0.31
CHMP1A-208ENST00000550102 SMAD5-AS1Q9Y6J3 95 aa13.13□□□□□ -0.31
CHMP1A-208ENST00000550102 IGKV1-5P01602 117 aa13.12□□□□□ -0.31
CHMP1A-208ENST00000550102 HLA-AP01891 365 aaKnown RBP13.12□□□□□ -0.31
CHMP1A-208ENST00000550102 UCP1P25874 307 aa13.12□□□□□ -0.31
CHMP1A-208ENST00000550102 PRCDQ00LT1 54 aa13.12□□□□□ -0.31
CHMP1A-208ENST00000550102 LCN12Q6JVE5 192 aa13.12□□□□□ -0.31
CHMP1A-208ENST00000550102 OR1L6Q8NGR2 347 aa13.12□□□□□ -0.31
CHMP1A-208ENST00000550102 RNASE11Q8TAA1 199 aaKnown RBP13.12□□□□□ -0.31
CHMP1A-208ENST00000550102 ZNF502Q8TBZ5 544 aa13.12□□□□□ -0.31
CHMP1A-208ENST00000550102 VN1R17PQ8TDU5 208 aa13.12□□□□□ -0.31
CHMP1A-208ENST00000550102 TEX13DA0A0J9YY54 714 aaPredicted RBP13.11□□□□□ -0.31
CHMP1A-208ENST00000550102 LGALS9O00182 355 aa13.11□□□□□ -0.31
CHMP1A-208ENST00000550102 OR2C1O95371 312 aa13.11□□□□□ -0.31
CHMP1A-208ENST00000550102 GPR183P32249 361 aa13.11□□□□□ -0.31
CHMP1A-208ENST00000550102 IZUMO4Q1ZYL8 232 aa13.11□□□□□ -0.31
CHMP1A-208ENST00000550102 SP6Q3SY56 376 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms