RNA–Protein interactions for RNA: ENST00000549328.1

CHMP1A-207, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-207ENST00000549328 ZNF182P17025 639 aaPredicted RBP14.1□□□□□ -0.15
CHMP1A-207ENST00000549328 PTBP1P26599 531 aaKnown RBP eCLIP14.1□□□□□ -0.15
CHMP1A-207ENST00000549328 GDPD1Q8N9F7 314 aa14.1□□□□□ -0.15
CHMP1A-207ENST00000549328 ZNF502Q8TBZ5 544 aa14.1□□□□□ -0.15
CHMP1A-207ENST00000549328 NAA50Q9GZZ1 169 aaKnown RBP14.1□□□□□ -0.15
CHMP1A-207ENST00000549328 TUBA4BQ9H853 241 aa14.1□□□□□ -0.15
CHMP1A-207ENST00000549328 ZC4H2Q9NQZ6 224 aa14.1□□□□□ -0.15
CHMP1A-207ENST00000549328 NDUFA4L2Q9NRX3 87 aa14.1□□□□□ -0.15
CHMP1A-207ENST00000549328 FKBP11Q9NYL4 201 aa14.1□□□□□ -0.15
CHMP1A-207ENST00000549328 ZNF785A8K8V0 405 aa14.09□□□□□ -0.15
CHMP1A-207ENST00000549328 A8MWP6 167 aa14.09□□□□□ -0.15
CHMP1A-207ENST00000549328 FAM25AB3EWG3 89 aa14.09□□□□□ -0.15
CHMP1A-207ENST00000549328 FAM25CB3EWG5 89 aa14.09□□□□□ -0.15
CHMP1A-207ENST00000549328 FAM25GB3EWG6 89 aa14.09□□□□□ -0.15
CHMP1A-207ENST00000549328 OR13C7P0DN81 318 aa14.09□□□□□ -0.15
CHMP1A-207ENST00000549328 CBLN1P23435 193 aa14.09□□□□□ -0.15
CHMP1A-207ENST00000549328 G6PCP35575 357 aa14.09□□□□□ -0.15
CHMP1A-207ENST00000549328 WT1-ASQ06250 92 aa14.09□□□□□ -0.15
CHMP1A-207ENST00000549328 PHLDA2Q53GA4 152 aa14.09□□□□□ -0.15
CHMP1A-207ENST00000549328 SLC38A6Q8IZM9 456 aa14.09□□□□□ -0.15
CHMP1A-207ENST00000549328 VN1R17PQ8TDU5 208 aa14.09□□□□□ -0.15
CHMP1A-207ENST00000549328 TSC22D3Q99576 134 aa14.09□□□□□ -0.15
CHMP1A-207ENST00000549328 PRNDQ9UKY0 176 aa14.09□□□□□ -0.15
CHMP1A-207ENST00000549328 ZNF320A2RRD8 509 aa14.08□□□□□ -0.16
CHMP1A-207ENST00000549328 GPR107Q5VW38 600 aa14.08□□□□□ -0.16
CHMP1A-207ENST00000549328 OR5B3Q8NH48 314 aa14.08□□□□□ -0.16
CHMP1A-207ENST00000549328 MUC7Q8TAX7 377 aa14.08□□□□□ -0.16
CHMP1A-207ENST00000549328 C15orf40Q8WUR7 153 aa14.08□□□□□ -0.16
CHMP1A-207ENST00000549328 LSM10Q969L4 123 aaKnown RBP14.08□□□□□ -0.16
CHMP1A-207ENST00000549328 SLC2A8Q9NY64 477 aa14.08□□□□□ -0.16
CHMP1A-207ENST00000549328 OR51B2Q9Y5P1 312 aa14.08□□□□□ -0.16
CHMP1A-207ENST00000549328 HUWE1Q7Z6Z7 4374 aaKnown RBP14.08□□□□□ -0.16
CHMP1A-207ENST00000549328 KMT2CQ8NEZ4 4911 aaKnown RBP14.07□□□□□ -0.16
CHMP1A-207ENST00000549328 TMEM213A2RRL7 107 aa14.07□□□□□ -0.16
CHMP1A-207ENST00000549328 CD81P60033 236 aa14.07□□□□□ -0.16
CHMP1A-207ENST00000549328 HAGHQ16775 308 aa14.07□□□□□ -0.16
CHMP1A-207ENST00000549328 TBC1D26Q86UD7 250 aa14.07□□□□□ -0.16
CHMP1A-207ENST00000549328 TMEM56Q96MV1 263 aa14.07□□□□□ -0.16
CHMP1A-207ENST00000549328 CITED4Q96RK1 184 aa14.07□□□□□ -0.16
CHMP1A-207ENST00000549328 ATP6V0BQ99437 205 aa14.07□□□□□ -0.16
CHMP1A-207ENST00000549328 NEURL2Q9BR09 285 aa14.07□□□□□ -0.16
CHMP1A-207ENST00000549328 PALMDQ9NP74 551 aa14.07□□□□□ -0.16
CHMP1A-207ENST00000549328 TMEM14BQ9NUH8 114 aa14.07□□□□□ -0.16
CHMP1A-207ENST00000549328 KLK11Q9UBX7 282 aa14.07□□□□□ -0.16
CHMP1A-207ENST00000549328 NSG2Q9Y328 171 aa14.07□□□□□ -0.16
CHMP1A-207ENST00000549328 F11RQ9Y624 299 aaKnown RBP14.07□□□□□ -0.16
CHMP1A-207ENST00000549328 IFNA6P05013 189 aa14.06□□□□□ -0.16
CHMP1A-207ENST00000549328 TBPP20226 339 aa14.06□□□□□ -0.16
CHMP1A-207ENST00000549328 GPR183P32249 361 aa14.06□□□□□ -0.16
CHMP1A-207ENST00000549328 SLC25A24Q6NUK1 477 aa14.06□□□□□ -0.16
CHMP1A-207ENST00000549328 PLET1Q6UQ28 207 aa14.06□□□□□ -0.16
CHMP1A-207ENST00000549328 ARRDC1Q8N5I2 433 aa14.06□□□□□ -0.16
CHMP1A-207ENST00000549328 OR1L6Q8NGR2 347 aa14.06□□□□□ -0.16
CHMP1A-207ENST00000549328 MARC2Q969Z3 335 aa14.06□□□□□ -0.16
CHMP1A-207ENST00000549328 SEC22AQ96IW7 307 aa14.06□□□□□ -0.16
CHMP1A-207ENST00000549328 SPATA25Q9BR10 227 aa14.06□□□□□ -0.16
CHMP1A-207ENST00000549328 HINT2Q9BX68 163 aa14.06□□□□□ -0.16
CHMP1A-207ENST00000549328 MRPS26Q9BYN8 205 aaKnown RBP14.06□□□□□ -0.16
CHMP1A-207ENST00000549328 EXTL2Q9UBQ6 330 aa14.06□□□□□ -0.16
CHMP1A-207ENST00000549328 MTFP1Q9UDX5 166 aa14.06□□□□□ -0.16
CHMP1A-207ENST00000549328 C15orf61A6NNL5 157 aa14.05□□□□□ -0.16
CHMP1A-207ENST00000549328 M0QYG6 137 aa14.05□□□□□ -0.16
CHMP1A-207ENST00000549328 EDN2P20800 178 aa14.05□□□□□ -0.16
CHMP1A-207ENST00000549328 ALDH3B2P48448 385 aa14.05□□□□□ -0.16
CHMP1A-207ENST00000549328 ELLP55199 621 aaPredicted RBP14.05□□□□□ -0.16
CHMP1A-207ENST00000549328 GUCA2BQ16661 112 aa14.05□□□□□ -0.16
CHMP1A-207ENST00000549328 RNASE10Q5GAN6 216 aaKnown RBP14.05□□□□□ -0.16
CHMP1A-207ENST00000549328 ZNF57Q68EA5 555 aaPredicted RBP14.05□□□□□ -0.16
CHMP1A-207ENST00000549328 LINC00322Q6ZN03 302 aaPredicted RBP14.05□□□□□ -0.16
CHMP1A-207ENST00000549328 UXS1Q8NBZ7 420 aa14.05□□□□□ -0.16
CHMP1A-207ENST00000549328 OR52I2Q8NH67 350 aa14.05□□□□□ -0.16
CHMP1A-207ENST00000549328 ZNF486Q96H40 463 aaPredicted RBP14.05□□□□□ -0.16
CHMP1A-207ENST00000549328 TGOLN2O43493 480 aa14.04□□□□□ -0.16
CHMP1A-207ENST00000549328 CD7P09564 240 aa14.04□□□□□ -0.16
CHMP1A-207ENST00000549328 C8orf88P0DMB2 117 aa14.04□□□□□ -0.16
CHMP1A-207ENST00000549328 RND3P61587 244 aa14.04□□□□□ -0.16
CHMP1A-207ENST00000549328 SPSB3Q6PJ21 355 aa14.04□□□□□ -0.16
CHMP1A-207ENST00000549328 H2BFWTQ7Z2G1 175 aa14.04□□□□□ -0.16
CHMP1A-207ENST00000549328 GPR141Q7Z602 305 aa14.04□□□□□ -0.16
CHMP1A-207ENST00000549328 LHFPL1Q86WI0 220 aa14.04□□□□□ -0.16
CHMP1A-207ENST00000549328 CACNG8Q8WXS5 425 aa14.04□□□□□ -0.16
CHMP1A-207ENST00000549328 BSCL2Q96G97 398 aaPredicted RBP14.04□□□□□ -0.16
CHMP1A-207ENST00000549328 ABHD1Q96SE0 405 aa14.04□□□□□ -0.16
CHMP1A-207ENST00000549328 ZNF436Q9C0F3 470 aaPredicted RBP14.04□□□□□ -0.16
CHMP1A-207ENST00000549328 MRPL27Q9P0M9 148 aaKnown RBP14.04□□□□□ -0.16
CHMP1A-207ENST00000549328 UFC1Q9Y3C8 167 aa14.04□□□□□ -0.16
CHMP1A-207ENST00000549328 DBX1A6NMT0 343 aa14.03□□□□□ -0.16
CHMP1A-207ENST00000549328 IGKV1-39P01597 117 aa14.03□□□□□ -0.16
CHMP1A-207ENST00000549328 CD3DP04234 171 aa14.03□□□□□ -0.16
CHMP1A-207ENST00000549328 IGKV1D-39P04432 117 aa14.03□□□□□ -0.16
CHMP1A-207ENST00000549328 MFAP2P55001 183 aa14.03□□□□□ -0.16
CHMP1A-207ENST00000549328 TM4SF20Q53R12 229 aa14.03□□□□□ -0.16
CHMP1A-207ENST00000549328 UNQ9165/PRO28630Q6UXU0 137 aa14.03□□□□□ -0.16
CHMP1A-207ENST00000549328 TMEM61Q8N0U2 210 aa14.03□□□□□ -0.16
CHMP1A-207ENST00000549328 WDR89Q96FK6 387 aaPredicted RBP14.03□□□□□ -0.16
CHMP1A-207ENST00000549328 PLEKHA3Q9HB20 300 aa14.03□□□□□ -0.16
CHMP1A-207ENST00000549328 MLXQ9UH92 298 aa14.03□□□□□ -0.16
CHMP1A-207ENST00000549328 TRAV25A0A0B4J276 109 aa14.02□□□□□ -0.17
CHMP1A-207ENST00000549328 OR11H12B2RN74 326 aa14.02□□□□□ -0.17
CHMP1A-207ENST00000549328 CASC10Q5T4H9 136 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms