RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 HMX3A6NHT5 357 aa16.52■□□□□ 0.24
CACNB3-210ENST00000548874 ST8SIA3O43173 380 aa16.52■□□□□ 0.24
CACNB3-210ENST00000548874 RBMXL2O75526 392 aaKnown RBP16.52■□□□□ 0.24
CACNB3-210ENST00000548874 IGHG4P01861 327 aa16.52■□□□□ 0.24
CACNB3-210ENST00000548874 TRAPPC2P0DI81 140 aa16.52■□□□□ 0.24
CACNB3-210ENST00000548874 TRAPPC2BP0DI82 140 aa16.52■□□□□ 0.24
CACNB3-210ENST00000548874 SLC35B1P78383 322 aa16.52■□□□□ 0.24
CACNB3-210ENST00000548874 SMCO1Q147U7 214 aa16.52■□□□□ 0.24
CACNB3-210ENST00000548874 ZNF329Q86UD4 541 aa16.52■□□□□ 0.24
CACNB3-210ENST00000548874 COL6A5A8TX70 2615 aa16.51■□□□□ 0.23
CACNB3-210ENST00000548874 IGLC7A0M8Q6 106 aa16.51■□□□□ 0.23
CACNB3-210ENST00000548874 SOX15O60248 233 aa16.51■□□□□ 0.23
CACNB3-210ENST00000548874 PITX3O75364 302 aa16.51■□□□□ 0.23
CACNB3-210ENST00000548874 PRCDQ00LT1 54 aa16.51■□□□□ 0.23
CACNB3-210ENST00000548874 TATDN3Q17R31 274 aa16.51■□□□□ 0.23
CACNB3-210ENST00000548874 COMMD1Q8N668 190 aa16.51■□□□□ 0.23
CACNB3-210ENST00000548874 OR5AU1Q8NGC0 362 aa16.51■□□□□ 0.23
CACNB3-210ENST00000548874 OR52E5Q8NH55 327 aa16.51■□□□□ 0.23
CACNB3-210ENST00000548874 A0A1W2PN81 502 aa16.5■□□□□ 0.23
CACNB3-210ENST00000548874 IGLV1-40P01703 118 aa16.5■□□□□ 0.23
CACNB3-210ENST00000548874 APELAP0DMC3 54 aa16.5■□□□□ 0.23
CACNB3-210ENST00000548874 CHRNA7P36544 502 aa16.5■□□□□ 0.23
CACNB3-210ENST00000548874 PDLIM3Q53GG5 364 aaPredicted RBP16.5■□□□□ 0.23
CACNB3-210ENST00000548874 TTC9CQ8N5M4 171 aa16.5■□□□□ 0.23
CACNB3-210ENST00000548874 OR5M8Q8NGP6 311 aa16.5■□□□□ 0.23
CACNB3-210ENST00000548874 FAM110DQ8TAY7 271 aaPredicted RBP16.5■□□□□ 0.23
CACNB3-210ENST00000548874 MPTX1A8MV57 137 aa16.49■□□□□ 0.23
CACNB3-210ENST00000548874 IFNA21P01568 189 aa16.49■□□□□ 0.23
CACNB3-210ENST00000548874 AREGP15514 252 aa16.49■□□□□ 0.23
CACNB3-210ENST00000548874 TCTEX1D4Q5JR98 221 aa16.49■□□□□ 0.23
CACNB3-210ENST00000548874 TEX38Q6PEX7 206 aa16.49■□□□□ 0.23
CACNB3-210ENST00000548874 C12orf54Q6X4T0 127 aa16.49■□□□□ 0.23
CACNB3-210ENST00000548874 HSD17B13Q7Z5P4 300 aaPredicted RBP16.49■□□□□ 0.23
CACNB3-210ENST00000548874 RNF152Q8N8N0 203 aa16.49■□□□□ 0.23
CACNB3-210ENST00000548874 OR10W1Q8NGF6 305 aa16.49■□□□□ 0.23
CACNB3-210ENST00000548874 CACFD1Q9UGQ2 172 aa16.49■□□□□ 0.23
CACNB3-210ENST00000548874 NPIPB5A8MRT5 1133 aa16.48■□□□□ 0.23
CACNB3-210ENST00000548874 CRYGCP07315 174 aa16.48■□□□□ 0.23
CACNB3-210ENST00000548874 ELANEP08246 267 aa16.48■□□□□ 0.23
CACNB3-210ENST00000548874 PSMB8P28062 276 aa16.48■□□□□ 0.23
CACNB3-210ENST00000548874 SPCS3P61009 180 aa16.48■□□□□ 0.23
CACNB3-210ENST00000548874 WT1-ASQ06250 92 aa16.48■□□□□ 0.23
CACNB3-210ENST00000548874 FOXE3Q13461 319 aa16.48■□□□□ 0.23
CACNB3-210ENST00000548874 UXS1Q8NBZ7 420 aa16.48■□□□□ 0.23
CACNB3-210ENST00000548874 OR5T1Q8NG75 326 aa16.48■□□□□ 0.23
CACNB3-210ENST00000548874 OR4X2Q8NGF9 303 aa16.48■□□□□ 0.23
CACNB3-210ENST00000548874 PDCD10Q9BUL8 212 aa16.48■□□□□ 0.23
CACNB3-210ENST00000548874 ZNF747Q9BV97 191 aa16.48■□□□□ 0.23
CACNB3-210ENST00000548874 HINT2Q9BX68 163 aa16.48■□□□□ 0.23
CACNB3-210ENST00000548874 ALG5Q9Y673 324 aa16.48■□□□□ 0.23
CACNB3-210ENST00000548874 INS-IGF2F8WCM5 200 aa16.47■□□□□ 0.23
CACNB3-210ENST00000548874 BRI3O95415 125 aa16.47■□□□□ 0.23
CACNB3-210ENST00000548874 IFNA17P01571 189 aa16.47■□□□□ 0.23
CACNB3-210ENST00000548874 CD28P10747 220 aa16.47■□□□□ 0.23
CACNB3-210ENST00000548874 CTRB1P17538 263 aa16.47■□□□□ 0.23
CACNB3-210ENST00000548874 PSMB6P28072 239 aa16.47■□□□□ 0.23
CACNB3-210ENST00000548874 CD83Q01151 205 aa16.47■□□□□ 0.23
CACNB3-210ENST00000548874 CTRB2Q6GPI1 263 aa16.47■□□□□ 0.23
CACNB3-210ENST00000548874 OR1S1Q8NH92 325 aa16.47■□□□□ 0.23
CACNB3-210ENST00000548874 OR10C1Q96KK4 312 aa16.47■□□□□ 0.23
CACNB3-210ENST00000548874 CITED1Q99966 193 aa16.47■□□□□ 0.23
CACNB3-210ENST00000548874 HSPB7Q9UBY9 170 aa16.47■□□□□ 0.23
CACNB3-210ENST00000548874 H3BUA1 57 aa16.46■□□□□ 0.23
CACNB3-210ENST00000548874 CCSO14618 274 aa16.46■□□□□ 0.23
CACNB3-210ENST00000548874 FBXO24O75426 580 aa16.46■□□□□ 0.23
CACNB3-210ENST00000548874 TNFRSF9Q07011 255 aa16.46■□□□□ 0.23
CACNB3-210ENST00000548874 SRSF4Q08170 494 aaKnown RBP16.46■□□□□ 0.23
CACNB3-210ENST00000548874 C2orf68Q2NKX9 166 aa16.46■□□□□ 0.23
CACNB3-210ENST00000548874 KLK9Q2XQG4 91 aa16.46■□□□□ 0.23
CACNB3-210ENST00000548874 SPINK9Q5DT21 86 aa16.46■□□□□ 0.23
CACNB3-210ENST00000548874 MYOZ3Q8TDC0 251 aa16.46■□□□□ 0.23
CACNB3-210ENST00000548874 PLEKHA3Q9HB20 300 aa16.46■□□□□ 0.23
CACNB3-210ENST00000548874 KLK9Q9UKQ9 250 aa16.46■□□□□ 0.23
CACNB3-210ENST00000548874 FAM90A26D6RGX4 464 aa16.45■□□□□ 0.22
CACNB3-210ENST00000548874 REG1AP05451 166 aa16.45■□□□□ 0.22
CACNB3-210ENST00000548874 OR13C7P0DN81 318 aa16.45■□□□□ 0.22
CACNB3-210ENST00000548874 OR2C3Q8N628 320 aa16.45■□□□□ 0.22
CACNB3-210ENST00000548874 C3orf56Q8N813 242 aa16.45■□□□□ 0.22
CACNB3-210ENST00000548874 KLK15Q9H2R5 256 aa16.45■□□□□ 0.22
CACNB3-210ENST00000548874 TENM1Q9UKZ4 2725 aa16.44■□□□□ 0.22
CACNB3-210ENST00000548874 NXPH3O95157 252 aa16.44■□□□□ 0.22
CACNB3-210ENST00000548874 IAH1Q2TAA2 248 aaPredicted RBP16.44■□□□□ 0.22
CACNB3-210ENST00000548874 CXorf66Q5JRM2 361 aaPredicted RBP16.44■□□□□ 0.22
CACNB3-210ENST00000548874 C19orf35Q6ZS72 473 aa16.44■□□□□ 0.22
CACNB3-210ENST00000548874 LCNL1Q6ZST4 164 aa16.44■□□□□ 0.22
CACNB3-210ENST00000548874 MRPL41Q8IXM3 137 aaKnown RBP16.44■□□□□ 0.22
CACNB3-210ENST00000548874 C11orf44Q8N8P7 122 aa16.44■□□□□ 0.22
CACNB3-210ENST00000548874 ZBTB8BQ8NAP8 495 aaPredicted RBP16.44■□□□□ 0.22
CACNB3-210ENST00000548874 OR4D5Q8NGN0 318 aa16.44■□□□□ 0.22
CACNB3-210ENST00000548874 SLA2Q9H6Q3 261 aa16.44■□□□□ 0.22
CACNB3-210ENST00000548874 RPLP1P05386 114 aaKnown RBP16.43■□□□□ 0.22
CACNB3-210ENST00000548874 PF4V1P10720 104 aa16.43■□□□□ 0.22
CACNB3-210ENST00000548874 HOXA1P49639 335 aaPredicted RBP16.43■□□□□ 0.22
CACNB3-210ENST00000548874 RAB9AP51151 201 aa16.43■□□□□ 0.22
CACNB3-210ENST00000548874 KIAA0141Q14154 515 aaPredicted RBP16.43■□□□□ 0.22
CACNB3-210ENST00000548874 ZNF114Q8NC26 417 aa16.43■□□□□ 0.22
CACNB3-210ENST00000548874 CITED2Q99967 270 aaPredicted RBP16.43■□□□□ 0.22
CACNB3-210ENST00000548874 TRBV9A0A0B4J1U6 114 aa16.42■□□□□ 0.22
CACNB3-210ENST00000548874 C13orf42A0A1B0GVH6 325 aa16.42■□□□□ 0.22
CACNB3-210ENST00000548874 SSNA1O43805 119 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms