RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 DUX5Q96PT3 197 aa22.79■■□□□ 1.24
BRF1-213ENST00000548421 MBD2Q9UBB5 411 aa22.79■■□□□ 1.24
BRF1-213ENST00000548421 SH2D7A6NKC9 451 aaPredicted RBP22.79■■□□□ 1.24
BRF1-213ENST00000548421 CGB1A6NKQ9 187 aa22.79■■□□□ 1.24
BRF1-213ENST00000548421 PVALBP20472 110 aaPredicted RBP22.79■■□□□ 1.24
BRF1-213ENST00000548421 ARPC1AQ92747 370 aa22.79■■□□□ 1.24
BRF1-213ENST00000548421 RAB40CQ96S21 281 aa22.79■■□□□ 1.24
BRF1-213ENST00000548421 HSPB9Q9BQS6 159 aa22.79■■□□□ 1.24
BRF1-213ENST00000548421 RNF126Q9BV68 326 aa22.79■■□□□ 1.24
BRF1-213ENST00000548421 ENY2Q9NPA8 101 aa22.79■■□□□ 1.24
BRF1-213ENST00000548421 OR5AC2Q9NZP5 309 aa22.79■■□□□ 1.24
BRF1-213ENST00000548421 CUBNO60494 3623 aa22.78■■□□□ 1.24
BRF1-213ENST00000548421 CLDN34H7C241 214 aa22.78■■□□□ 1.24
BRF1-213ENST00000548421 C1QBP02746 253 aa22.78■■□□□ 1.24
BRF1-213ENST00000548421 IAPPP10997 89 aa22.78■■□□□ 1.24
BRF1-213ENST00000548421 CIB3Q96Q77 187 aaPredicted RBP22.78■■□□□ 1.24
BRF1-213ENST00000548421 ESM1Q9NQ30 184 aa22.78■■□□□ 1.24
BRF1-213ENST00000548421 A0A1B0GW64 132 aa22.77■■□□□ 1.24
BRF1-213ENST00000548421 A0A1W2PN81 502 aa22.77■■□□□ 1.24
BRF1-213ENST00000548421 L7N2F9 121 aa22.77■■□□□ 1.24
BRF1-213ENST00000548421 SLC25A4P12235 298 aa22.77■■□□□ 1.24
BRF1-213ENST00000548421 LYL1P12980 280 aa22.77■■□□□ 1.24
BRF1-213ENST00000548421 CHRNA7P36544 502 aa22.77■■□□□ 1.24
BRF1-213ENST00000548421 VAMP2P63027 116 aa22.77■■□□□ 1.24
BRF1-213ENST00000548421 NDPQ00604 133 aa22.77■■□□□ 1.24
BRF1-213ENST00000548421 GRPEL2Q8TAA5 225 aa22.77■■□□□ 1.24
BRF1-213ENST00000548421 C11orf1Q9H5F2 150 aa22.77■■□□□ 1.24
BRF1-213ENST00000548421 E5RGE8 158 aa22.76■■□□□ 1.23
BRF1-213ENST00000548421 GPR137BO60478 399 aa22.76■■□□□ 1.23
BRF1-213ENST00000548421 LY86O95711 162 aa22.76■■□□□ 1.23
BRF1-213ENST00000548421 HILS1P60008 231 aa22.76■■□□□ 1.23
BRF1-213ENST00000548421 BLCAPP62952 87 aa22.76■■□□□ 1.23
BRF1-213ENST00000548421 ZFP69Q49AA0 526 aa22.76■■□□□ 1.23
BRF1-213ENST00000548421 OR10W1Q8NGF6 305 aa22.76■■□□□ 1.23
BRF1-213ENST00000548421 HIPK2Q9H2X6 1198 aa22.76■■□□□ 1.23
BRF1-213ENST00000548421 VDAC2P45880 294 aaPredicted RBP22.75■■□□□ 1.23
BRF1-213ENST00000548421 C9orf152Q5JTZ5 239 aa22.75■■□□□ 1.23
BRF1-213ENST00000548421 MRPL41Q8IXM3 137 aaKnown RBP22.75■■□□□ 1.23
BRF1-213ENST00000548421 ABHD5Q8WTS1 349 aa22.75■■□□□ 1.23
BRF1-213ENST00000548421 SMIM8Q96KF7 97 aa22.75■■□□□ 1.23
BRF1-213ENST00000548421 JMJD8Q96S16 334 aa22.75■■□□□ 1.23
BRF1-213ENST00000548421 SRSF8Q9BRL6 282 aaKnown RBP22.75■■□□□ 1.23
BRF1-213ENST00000548421 HEYLQ9NQ87 328 aaPredicted RBP22.75■■□□□ 1.23
BRF1-213ENST00000548421 WSB1Q9Y6I7 421 aa22.75■■□□□ 1.23
BRF1-213ENST00000548421 MSGN1A6NI15 193 aa22.74■■□□□ 1.23
BRF1-213ENST00000548421 TEX22C9J3V5 150 aa22.74■■□□□ 1.23
BRF1-213ENST00000548421 INS-IGF2F8WCM5 200 aa22.74■■□□□ 1.23
BRF1-213ENST00000548421 TAS2R30P59541 319 aa22.74■■□□□ 1.23
BRF1-213ENST00000548421 DCUN1D4Q92564 292 aa22.74■■□□□ 1.23
BRF1-213ENST00000548421 FAM103A1Q9BTL3 118 aaKnown RBP22.74■■□□□ 1.23
BRF1-213ENST00000548421 NPFFR1Q9GZQ6 430 aa22.74■■□□□ 1.23
BRF1-213ENST00000548421 FXYD6-FXYD2A0A087WZ82 144 aa22.73■■□□□ 1.23
BRF1-213ENST00000548421 KCNAB3O43448 404 aa22.73■■□□□ 1.23
BRF1-213ENST00000548421 TMEM50AO95807 157 aa22.73■■□□□ 1.23
BRF1-213ENST00000548421 PAX9P55771 341 aa22.73■■□□□ 1.23
BRF1-213ENST00000548421 RPL23AP62750 156 aaKnown RBP22.73■■□□□ 1.23
BRF1-213ENST00000548421 HSD17B13Q7Z5P4 300 aaPredicted RBP22.73■■□□□ 1.23
BRF1-213ENST00000548421 OR11H4Q8NGC9 324 aa22.73■■□□□ 1.23
BRF1-213ENST00000548421 PARP11Q9NR21 331 aa22.73■■□□□ 1.23
BRF1-213ENST00000548421 IGLC7A0M8Q6 106 aa22.73■■□□□ 1.23
BRF1-213ENST00000548421 IGHG2P01859 326 aa22.73■■□□□ 1.23
BRF1-213ENST00000548421 WT1-ASQ06250 92 aa22.73■■□□□ 1.23
BRF1-213ENST00000548421 PSENENQ9NZ42 101 aa22.73■■□□□ 1.23
BRF1-213ENST00000548421 TEP1Q99973 2627 aaKnown RBP22.72■■□□□ 1.23
BRF1-213ENST00000548421 ATP6V0E1O15342 81 aa22.72■■□□□ 1.23
BRF1-213ENST00000548421 P2RY1P47900 373 aa22.72■■□□□ 1.23
BRF1-213ENST00000548421 ERHP84090 104 aaKnown RBP22.72■■□□□ 1.23
BRF1-213ENST00000548421 SLC35E3Q7Z769 313 aa22.72■■□□□ 1.23
BRF1-213ENST00000548421 SGMS2Q8NHU3 365 aa22.72■■□□□ 1.23
BRF1-213ENST00000548421 FBXO7Q9Y3I1 522 aa22.72■■□□□ 1.23
BRF1-213ENST00000548421 TRIM77I1YAP6 450 aa22.71■■□□□ 1.23
BRF1-213ENST00000548421 TSC22D2O75157 780 aa22.71■■□□□ 1.23
BRF1-213ENST00000548421 RNASE1P07998 156 aaKnown RBP22.71■■□□□ 1.23
BRF1-213ENST00000548421 APELAP0DMC3 54 aa22.71■■□□□ 1.23
BRF1-213ENST00000548421 OR13C7P0DN81 318 aa22.71■■□□□ 1.23
BRF1-213ENST00000548421 TMEM65Q6PI78 240 aa22.71■■□□□ 1.23
BRF1-213ENST00000548421 ZNF546Q86UE3 836 aa22.71■■□□□ 1.23
BRF1-213ENST00000548421 HYLS1Q96M11 299 aa22.71■■□□□ 1.23
BRF1-213ENST00000548421 LYRM2Q9NU23 88 aaPredicted RBP22.71■■□□□ 1.23
BRF1-213ENST00000548421 H3BP45 60 aa22.7■■□□□ 1.22
BRF1-213ENST00000548421 EGR2P11161 476 aaPredicted RBP22.7■■□□□ 1.22
BRF1-213ENST00000548421 CAV2P51636 162 aa22.7■■□□□ 1.22
BRF1-213ENST00000548421 NOXA1Q86UR1 476 aa22.7■■□□□ 1.22
BRF1-213ENST00000548421 OR2C3Q8N628 320 aa22.7■■□□□ 1.22
BRF1-213ENST00000548421 PPP1R14BQ96C90 147 aa22.7■■□□□ 1.22
BRF1-213ENST00000548421 PRSS22Q9GZN4 317 aa22.7■■□□□ 1.22
BRF1-213ENST00000548421 U3KQ87 197 aa22.7■■□□□ 1.22
BRF1-213ENST00000548421 LINC01548A6NM66 108 aa22.69■■□□□ 1.22
BRF1-213ENST00000548421 HMSDA8MTL9 139 aa22.69■■□□□ 1.22
BRF1-213ENST00000548421 AREGP15514 252 aa22.69■■□□□ 1.22
BRF1-213ENST00000548421 RPP30P78346 268 aaKnown RBP22.69■■□□□ 1.22
BRF1-213ENST00000548421 SPANXN5Q5MJ07 72 aa22.69■■□□□ 1.22
BRF1-213ENST00000548421 Q6ZS46 218 aa22.69■■□□□ 1.22
BRF1-213ENST00000548421 HTR2BP41595 481 aa22.68■■□□□ 1.22
BRF1-213ENST00000548421 UBA52P62987 128 aaKnown RBP22.68■■□□□ 1.22
BRF1-213ENST00000548421 LFNGQ8NES3 379 aa22.68■■□□□ 1.22
BRF1-213ENST00000548421 SLC24A4Q8NFF2 622 aa22.68■■□□□ 1.22
BRF1-213ENST00000548421 TNFSF18Q9UNG2 199 aa22.68■■□□□ 1.22
BRF1-213ENST00000548421 FAM181BA6NEQ2 426 aa22.67■■□□□ 1.22
BRF1-213ENST00000548421 IFNA10P01566 189 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms