RNA–Protein interactions for RNA: ENST00000548097.5

KRT4-201, Transcript of keratin 4, humanhuman

TSL 1 (best)

Gene KRT4, Length 1,839 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4-201ENST00000548097 TSPAN9O75954 239 aa13.48□□□□□ -0.25
KRT4-201ENST00000548097 LRRC37A5PQ49AS3 106 aa13.48□□□□□ -0.25
KRT4-201ENST00000548097 C2orf50Q96LR7 162 aa13.48□□□□□ -0.25
KRT4-201ENST00000548097 RBKSQ9H477 322 aa13.48□□□□□ -0.25
KRT4-201ENST00000548097 FKBP11Q9NYL4 201 aa13.48□□□□□ -0.25
KRT4-201ENST00000548097 TRAPPC2P0DI81 140 aa13.48□□□□□ -0.25
KRT4-201ENST00000548097 TRAPPC2BP0DI82 140 aa13.48□□□□□ -0.25
KRT4-201ENST00000548097 SLC25A6P12236 298 aa13.48□□□□□ -0.25
KRT4-201ENST00000548097 VDAC2P45880 294 aaPredicted RBP13.48□□□□□ -0.25
KRT4-201ENST00000548097 POLR2GP62487 172 aaKnown RBP eCLIP13.48□□□□□ -0.25
KRT4-201ENST00000548097 WT1-ASQ06250 92 aa13.48□□□□□ -0.25
KRT4-201ENST00000548097 TNFRSF9Q07011 255 aa13.48□□□□□ -0.25
KRT4-201ENST00000548097 UNQ5815/PRO19632Q6UWF5 114 aa13.48□□□□□ -0.25
KRT4-201ENST00000548097 ZNF329Q86UD4 541 aa13.48□□□□□ -0.25
KRT4-201ENST00000548097 Q8N2B8 174 aa13.48□□□□□ -0.25
KRT4-201ENST00000548097 OR5T1Q8NG75 326 aa13.48□□□□□ -0.25
KRT4-201ENST00000548097 OR5B3Q8NH48 314 aa13.48□□□□□ -0.25
KRT4-201ENST00000548097 OR2T6Q8NHC8 308 aa13.48□□□□□ -0.25
KRT4-201ENST00000548097 SGMS2Q8NHU3 365 aa13.48□□□□□ -0.25
KRT4-201ENST00000548097 HSPB7Q9UBY9 170 aa13.48□□□□□ -0.25
KRT4-201ENST00000548097 ZNF257Q9Y2Q1 563 aa13.48□□□□□ -0.25
KRT4-201ENST00000548097 CEBPZOSA8MTT3 80 aa13.47□□□□□ -0.25
KRT4-201ENST00000548097 KCNAB3O43448 404 aa13.47□□□□□ -0.25
KRT4-201ENST00000548097 MBPP02686 304 aaPredicted RBP13.47□□□□□ -0.25
KRT4-201ENST00000548097 IAPPP10997 89 aa13.47□□□□□ -0.25
KRT4-201ENST00000548097 MDKP21741 143 aaPredicted RBP13.47□□□□□ -0.25
KRT4-201ENST00000548097 NKX2-1P43699 371 aaPredicted RBP13.47□□□□□ -0.25
KRT4-201ENST00000548097 HOXA1P49639 335 aaPredicted RBP13.47□□□□□ -0.25
KRT4-201ENST00000548097 PRCDQ00LT1 54 aa13.47□□□□□ -0.25
KRT4-201ENST00000548097 AARDQ4LEZ3 155 aa13.47□□□□□ -0.25
KRT4-201ENST00000548097 LINC01006Q8NI28 216 aa13.47□□□□□ -0.25
KRT4-201ENST00000548097 LSM5Q9Y4Y9 91 aaKnown RBP13.47□□□□□ -0.25
KRT4-201ENST00000548097 TRAV41A0A0B4J266 112 aa13.46□□□□□ -0.25
KRT4-201ENST00000548097 IGLC7A0M8Q6 106 aa13.46□□□□□ -0.25
KRT4-201ENST00000548097 PRH1P02810 166 aa13.46□□□□□ -0.25
KRT4-201ENST00000548097 OR13C7P0DN81 318 aa13.46□□□□□ -0.25
KRT4-201ENST00000548097 SPCS3P61009 180 aa13.46□□□□□ -0.25
KRT4-201ENST00000548097 RPL15P61313 204 aaKnown RBP13.46□□□□□ -0.25
KRT4-201ENST00000548097 CD83Q01151 205 aa13.46□□□□□ -0.25
KRT4-201ENST00000548097 RAB32Q13637 225 aa13.46□□□□□ -0.25
KRT4-201ENST00000548097 STPG2Q8N412 459 aa13.46□□□□□ -0.25
KRT4-201ENST00000548097 PLEKHA3Q9HB20 300 aa13.46□□□□□ -0.25
KRT4-201ENST00000548097 A0A1W2PN81 502 aa13.46□□□□□ -0.26
KRT4-201ENST00000548097 HAX1O00165 279 aa13.46□□□□□ -0.26
KRT4-201ENST00000548097 AP4M1O00189 453 aa13.46□□□□□ -0.26
KRT4-201ENST00000548097 SOX15O60248 233 aa13.46□□□□□ -0.26
KRT4-201ENST00000548097 IGF1P05019 195 aa13.46□□□□□ -0.26
KRT4-201ENST00000548097 FGF2P09038 288 aa13.46□□□□□ -0.26
KRT4-201ENST00000548097 CHRNA7P36544 502 aa13.46□□□□□ -0.26
KRT4-201ENST00000548097 S100A10P60903 97 aa13.46□□□□□ -0.26
KRT4-201ENST00000548097 DEFA5Q01523 94 aa13.46□□□□□ -0.26
KRT4-201ENST00000548097 ID3Q02535 119 aa13.46□□□□□ -0.26
KRT4-201ENST00000548097 IL15RAQ13261 267 aa13.46□□□□□ -0.26
KRT4-201ENST00000548097 KRTAP24-1Q3LI83 254 aa13.46□□□□□ -0.26
KRT4-201ENST00000548097 ZNF436Q9C0F3 470 aaPredicted RBP13.46□□□□□ -0.26
KRT4-201ENST00000548097 FBN1P35555 2871 aaKnown RBP13.45□□□□□ -0.26
KRT4-201ENST00000548097 WRBO00258 174 aa13.45□□□□□ -0.26
KRT4-201ENST00000548097 SSSCA1O60232 199 aa13.45□□□□□ -0.26
KRT4-201ENST00000548097 LCNL1Q6ZST4 164 aa13.45□□□□□ -0.26
KRT4-201ENST00000548097 OR52E5Q8NH55 327 aa13.45□□□□□ -0.26
KRT4-201ENST00000548097 Q5BKY6 102 aa13.44□□□□□ -0.26
KRT4-201ENST00000548097 DTD1Q8TEA8 209 aa13.44□□□□□ -0.26
KRT4-201ENST00000548097 C16orf95Q9H693 158 aa13.44□□□□□ -0.26
KRT4-201ENST00000548097 RCL1Q9Y2P8 373 aaKnown RBP13.44□□□□□ -0.26
KRT4-201ENST00000548097 H3BP45 60 aa13.43□□□□□ -0.26
KRT4-201ENST00000548097 SMLR1H3BR10 107 aa13.43□□□□□ -0.26
KRT4-201ENST00000548097 K7EPK0 472 aa13.43□□□□□ -0.26
KRT4-201ENST00000548097 SYNGR2O43760 224 aa13.43□□□□□ -0.26
KRT4-201ENST00000548097 HKR1P10072 659 aa13.43□□□□□ -0.26
KRT4-201ENST00000548097 BCAP31P51572 246 aa13.43□□□□□ -0.26
KRT4-201ENST00000548097 C19orf54Q5BKX5 351 aa13.43□□□□□ -0.26
KRT4-201ENST00000548097 PPP1R1CQ8WVI7 109 aa13.43□□□□□ -0.26
KRT4-201ENST00000548097 MS4A10Q96PG2 267 aa13.43□□□□□ -0.26
KRT4-201ENST00000548097 NMES1Q9C002 83 aa13.43□□□□□ -0.26
KRT4-201ENST00000548097 HEYLQ9NQ87 328 aaPredicted RBP13.43□□□□□ -0.26
KRT4-201ENST00000548097 NDUFA7O95182 113 aa13.43□□□□□ -0.26
KRT4-201ENST00000548097 TMEM50AO95807 157 aa13.43□□□□□ -0.26
KRT4-201ENST00000548097 PPIFP30405 207 aaKnown RBP13.43□□□□□ -0.26
KRT4-201ENST00000548097 PDLIM3Q53GG5 364 aaPredicted RBP13.43□□□□□ -0.26
KRT4-201ENST00000548097 AKIRIN2Q53H80 203 aa13.43□□□□□ -0.26
KRT4-201ENST00000548097 CENPVQ7Z7K6 275 aaPredicted RBP13.43□□□□□ -0.26
KRT4-201ENST00000548097 ENY2Q9NPA8 101 aa13.43□□□□□ -0.26
KRT4-201ENST00000548097 ZNF355PQ9NSJ1 428 aa13.43□□□□□ -0.26
KRT4-201ENST00000548097 PSMB6P28072 239 aa13.42□□□□□ -0.26
KRT4-201ENST00000548097 CRIP2P52943 208 aaPredicted RBP13.42□□□□□ -0.26
KRT4-201ENST00000548097 TMEM267Q0VDI3 215 aaPredicted RBP13.42□□□□□ -0.26
KRT4-201ENST00000548097 ATRQ13535 2644 aa13.42□□□□□ -0.26
KRT4-201ENST00000548097 KLHDC1Q8N7A1 406 aa13.42□□□□□ -0.26
KRT4-201ENST00000548097 C11orf44Q8N8P7 122 aa13.42□□□□□ -0.26
KRT4-201ENST00000548097 OR4F5Q8NH21 305 aa13.42□□□□□ -0.26
KRT4-201ENST00000548097 RANGRFQ9HD47 186 aaPredicted RBP13.42□□□□□ -0.26
KRT4-201ENST00000548097 RNF114Q9Y508 228 aa13.42□□□□□ -0.26
KRT4-201ENST00000548097 DMRT1Q9Y5R6 373 aa13.42□□□□□ -0.26
KRT4-201ENST00000548097 FAM90A26D6RGX4 464 aa13.41□□□□□ -0.26
KRT4-201ENST00000548097 H0YIZ8 118 aa13.41□□□□□ -0.26
KRT4-201ENST00000548097 CTRB1P17538 263 aa13.41□□□□□ -0.26
KRT4-201ENST00000548097 MFAP2P55001 183 aa13.41□□□□□ -0.26
KRT4-201ENST00000548097 CFHR3Q02985 330 aa13.41□□□□□ -0.26
KRT4-201ENST00000548097 CD300CQ08708 224 aa13.41□□□□□ -0.26
KRT4-201ENST00000548097 CTRB2Q6GPI1 263 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms