RNA–Protein interactions for RNA: ENST00000546947.5

CCDC38-205, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 4

Gene CCDC38, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-205ENST00000546947 EEF1AKMT3Q96AZ1 226 aa11.29□□□□□ -0.6
CCDC38-205ENST00000546947 SLIRPQ9GZT3 109 aaKnown RBP11.29□□□□□ -0.6
CCDC38-205ENST00000546947 C6orf62Q9GZU0 229 aaPredicted RBP11.29□□□□□ -0.6
CCDC38-205ENST00000546947 FKBP11Q9NYL4 201 aa11.29□□□□□ -0.6
CCDC38-205ENST00000546947 SIGLEC8Q9NYZ4 499 aa11.29□□□□□ -0.6
CCDC38-205ENST00000546947 PEMTQ9UBM1 199 aa11.29□□□□□ -0.6
CCDC38-205ENST00000546947 PRNDQ9UKY0 176 aa11.29□□□□□ -0.6
CCDC38-205ENST00000546947 SORL1Q92673 2214 aa11.29□□□□□ -0.6
CCDC38-205ENST00000546947 TEX50A0A1B0GTY4 177 aa11.28□□□□□ -0.6
CCDC38-205ENST00000546947 CYB5BO43169 146 aa11.28□□□□□ -0.6
CCDC38-205ENST00000546947 NDUFB8O95169 186 aa11.28□□□□□ -0.6
CCDC38-205ENST00000546947 OR4D10Q8NGI6 311 aa11.28□□□□□ -0.6
CCDC38-205ENST00000546947 TERB2Q8NHR7 220 aa11.28□□□□□ -0.6
CCDC38-205ENST00000546947 ZFAND1Q8TCF1 268 aa11.28□□□□□ -0.6
CCDC38-205ENST00000546947 SEC22AQ96IW7 307 aa11.28□□□□□ -0.6
CCDC38-205ENST00000546947 CXorf58Q96LI9 332 aa11.28□□□□□ -0.6
CCDC38-205ENST00000546947 NDUFA4L2Q9NRX3 87 aa11.28□□□□□ -0.6
CCDC38-205ENST00000546947 THYN1Q9P016 225 aa11.28□□□□□ -0.6
CCDC38-205ENST00000546947 OR51B2Q9Y5P1 312 aa11.28□□□□□ -0.6
CCDC38-205ENST00000546947 DMRT1Q9Y5R6 373 aa11.28□□□□□ -0.6
CCDC38-205ENST00000546947 CEPT1Q9Y6K0 416 aa11.28□□□□□ -0.6
CCDC38-205ENST00000546947 TRBV7-1A0A0A6YYK4 115 aa11.27□□□□□ -0.61
CCDC38-205ENST00000546947 GGCTO75223 188 aaKnown RBP11.27□□□□□ -0.61
CCDC38-205ENST00000546947 IGKV1-39P01597 117 aa11.27□□□□□ -0.61
CCDC38-205ENST00000546947 IGKV1D-39P04432 117 aa11.27□□□□□ -0.61
CCDC38-205ENST00000546947 SERPINE2P07093 398 aa11.27□□□□□ -0.61
CCDC38-205ENST00000546947 PPP5CP53041 499 aa11.27□□□□□ -0.61
CCDC38-205ENST00000546947 PIGPP57054 158 aa11.27□□□□□ -0.61
CCDC38-205ENST00000546947 MEF2DQ14814 521 aa11.27□□□□□ -0.61
CCDC38-205ENST00000546947 SCGB2B2Q4G0G5 96 aa11.27□□□□□ -0.61
CCDC38-205ENST00000546947 IL34Q6ZMJ4 242 aa11.27□□□□□ -0.61
CCDC38-205ENST00000546947 GDPD1Q8N9F7 314 aa11.27□□□□□ -0.61
CCDC38-205ENST00000546947 CCDC71LQ8N9Z2 235 aa11.27□□□□□ -0.61
CCDC38-205ENST00000546947 OR10W1Q8NGF6 305 aa11.27□□□□□ -0.61
CCDC38-205ENST00000546947 OR5B3Q8NH48 314 aa11.27□□□□□ -0.61
CCDC38-205ENST00000546947 LSM10Q969L4 123 aaKnown RBP11.27□□□□□ -0.61
CCDC38-205ENST00000546947 TMEM56Q96MV1 263 aa11.27□□□□□ -0.61
CCDC38-205ENST00000546947 NXF2Q9GZY0 626 aaKnown RBP11.27□□□□□ -0.61
CCDC38-205ENST00000546947 RSL24D1Q9UHA3 163 aaKnown RBP11.27□□□□□ -0.61
CCDC38-205ENST00000546947 NSG2Q9Y328 171 aa11.27□□□□□ -0.61
CCDC38-205ENST00000546947 SMAD5-AS1Q9Y6J3 95 aa11.27□□□□□ -0.61
CCDC38-205ENST00000546947 COL7A1Q02388 2944 aa11.26□□□□□ -0.61
CCDC38-205ENST00000546947 C15orf61A6NNL5 157 aa11.26□□□□□ -0.61
CCDC38-205ENST00000546947 PPP5D1E7EU14 171 aa11.26□□□□□ -0.61
CCDC38-205ENST00000546947 H0Y980 276 aa11.26□□□□□ -0.61
CCDC38-205ENST00000546947 GSTZ1O43708 216 aaPredicted RBP11.26□□□□□ -0.61
CCDC38-205ENST00000546947 CSN3P07498 182 aa11.26□□□□□ -0.61
CCDC38-205ENST00000546947 AKAIN1P0CW23 69 aa11.26□□□□□ -0.61
CCDC38-205ENST00000546947 PI3P19957 117 aa11.26□□□□□ -0.61
CCDC38-205ENST00000546947 WT1-ASQ06250 92 aa11.26□□□□□ -0.61
CCDC38-205ENST00000546947 CLEC19AQ6UXS0 136 aa11.26□□□□□ -0.61
CCDC38-205ENST00000546947 H2BFWTQ7Z2G1 175 aa11.26□□□□□ -0.61
CCDC38-205ENST00000546947 MCFD2Q8NI22 146 aa11.26□□□□□ -0.61
CCDC38-205ENST00000546947 CCDC140Q96MF4 163 aa11.26□□□□□ -0.61
CCDC38-205ENST00000546947 TMEM14BQ9NUH8 114 aa11.26□□□□□ -0.61
CCDC38-205ENST00000546947 COPZ2Q9P299 210 aa11.26□□□□□ -0.61
CCDC38-205ENST00000546947 DISC1C4P0D8 188 aa11.25□□□□□ -0.61
CCDC38-205ENST00000546947 LGALS9O00182 355 aa11.25□□□□□ -0.61
CCDC38-205ENST00000546947 B3GALNT1O75752 331 aa11.25□□□□□ -0.61
CCDC38-205ENST00000546947 IGHV3-23P01764 117 aa11.25□□□□□ -0.61
CCDC38-205ENST00000546947 CTSDP07339 412 aaPredicted RBP11.25□□□□□ -0.61
CCDC38-205ENST00000546947 NHLRC4P0CG21 123 aaPredicted RBP11.25□□□□□ -0.61
CCDC38-205ENST00000546947 OR13C7P0DN81 318 aa11.25□□□□□ -0.61
CCDC38-205ENST00000546947 ARL3P36405 182 aa11.25□□□□□ -0.61
CCDC38-205ENST00000546947 HAPLN4Q86UW8 402 aa11.25□□□□□ -0.61
CCDC38-205ENST00000546947 GPHB5Q86YW7 130 aa11.25□□□□□ -0.61
CCDC38-205ENST00000546947 OR13C8Q8NGS7 320 aa11.25□□□□□ -0.61
CCDC38-205ENST00000546947 OR4A16Q8NH70 328 aa11.25□□□□□ -0.61
CCDC38-205ENST00000546947 MARCH1Q8TCQ1 289 aa11.25□□□□□ -0.61
CCDC38-205ENST00000546947 MRGPRFQ96AM1 343 aa11.25□□□□□ -0.61
CCDC38-205ENST00000546947 HINT2Q9BX68 163 aa11.25□□□□□ -0.61
CCDC38-205ENST00000546947 F11RQ9Y624 299 aaKnown RBP11.25□□□□□ -0.61
CCDC38-205ENST00000546947 C3orf85A0A1B0GTC6 90 aa11.24□□□□□ -0.61
CCDC38-205ENST00000546947 FABP12A6NFH5 140 aa11.24□□□□□ -0.61
CCDC38-205ENST00000546947 MFSD2BA6NFX1 497 aa11.24□□□□□ -0.61
CCDC38-205ENST00000546947 CCDC160A6NGH7 325 aa11.24□□□□□ -0.61
CCDC38-205ENST00000546947 DBX1A6NMT0 343 aa11.24□□□□□ -0.61
CCDC38-205ENST00000546947 ATG12O94817 140 aa11.24□□□□□ -0.61
CCDC38-205ENST00000546947 TNFSF8P32971 234 aa11.24□□□□□ -0.61
CCDC38-205ENST00000546947 MECP2P51608 486 aaKnown RBP11.24□□□□□ -0.61
CCDC38-205ENST00000546947 SURF2Q15527 256 aaPredicted RBP11.24□□□□□ -0.61
CCDC38-205ENST00000546947 SLC25A24Q6NUK1 477 aa11.24□□□□□ -0.61
CCDC38-205ENST00000546947 FAAP20Q6NZ36 180 aa11.24□□□□□ -0.61
CCDC38-205ENST00000546947 Q8N402 240 aa11.24□□□□□ -0.61
CCDC38-205ENST00000546947 OR4C16Q8NGL9 310 aa11.24□□□□□ -0.61
CCDC38-205ENST00000546947 OR1L6Q8NGR2 347 aa11.24□□□□□ -0.61
CCDC38-205ENST00000546947 OR2K2Q8NGT1 345 aa11.24□□□□□ -0.61
CCDC38-205ENST00000546947 VN1R17PQ8TDU5 208 aa11.24□□□□□ -0.61
CCDC38-205ENST00000546947 TP53RKQ96S44 253 aa11.24□□□□□ -0.61
CCDC38-205ENST00000546947 SOSTQ9BQB4 213 aa11.24□□□□□ -0.61
CCDC38-205ENST00000546947 S4R3C0 116 aa11.24□□□□□ -0.61
CCDC38-205ENST00000546947 ANKRD20A5PA0PJZ0 165 aa11.23□□□□□ -0.61
CCDC38-205ENST00000546947 OR2C1O95371 312 aa11.23□□□□□ -0.61
CCDC38-205ENST00000546947 CLEC3BP05452 202 aa11.23□□□□□ -0.61
CCDC38-205ENST00000546947 LCN12Q6JVE5 192 aa11.23□□□□□ -0.61
CCDC38-205ENST00000546947 ZNF502Q8TBZ5 544 aa11.23□□□□□ -0.61
CCDC38-205ENST00000546947 PRRT1Q99946 306 aa11.23□□□□□ -0.61
CCDC38-205ENST00000546947 C14orf166Q9Y224 244 aaKnown RBP11.23□□□□□ -0.61
CCDC38-205ENST00000546947 HLA-AP01891 365 aaKnown RBP11.22□□□□□ -0.61
CCDC38-205ENST00000546947 UCP1P25874 307 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms