RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 SYNJ2BPP57105 145 aa12.16□□□□□ -0.46
DDX54-204ENST00000546898 CCDC71LQ8N9Z2 235 aa12.16□□□□□ -0.46
DDX54-204ENST00000546898 OR4D10Q8NGI6 311 aa12.16□□□□□ -0.46
DDX54-204ENST00000546898 OR5B3Q8NH48 314 aa12.16□□□□□ -0.46
DDX54-204ENST00000546898 ZFAND1Q8TCF1 268 aa12.16□□□□□ -0.46
DDX54-204ENST00000546898 LSM10Q969L4 123 aaKnown RBP12.16□□□□□ -0.46
DDX54-204ENST00000546898 SEC22AQ96IW7 307 aa12.16□□□□□ -0.46
DDX54-204ENST00000546898 B9D2Q9BPU9 175 aa12.16□□□□□ -0.46
DDX54-204ENST00000546898 LSM4Q9Y4Z0 139 aaKnown RBP12.16□□□□□ -0.46
DDX54-204ENST00000546898 CCDC160A6NGH7 325 aa12.15□□□□□ -0.46
DDX54-204ENST00000546898 C15orf61A6NNL5 157 aa12.15□□□□□ -0.46
DDX54-204ENST00000546898 DISC1C4P0D8 188 aa12.15□□□□□ -0.46
DDX54-204ENST00000546898 GSTZ1O43708 216 aaPredicted RBP12.15□□□□□ -0.46
DDX54-204ENST00000546898 LY86O95711 162 aa12.15□□□□□ -0.46
DDX54-204ENST00000546898 IGLV1-51P01701 117 aa12.15□□□□□ -0.46
DDX54-204ENST00000546898 SERPINE2P07093 398 aa12.15□□□□□ -0.46
DDX54-204ENST00000546898 AKAIN1P0CW23 69 aa12.15□□□□□ -0.46
DDX54-204ENST00000546898 PIGPP57054 158 aa12.15□□□□□ -0.46
DDX54-204ENST00000546898 SCGB2B2Q4G0G5 96 aa12.15□□□□□ -0.46
DDX54-204ENST00000546898 GDPD1Q8N9F7 314 aa12.15□□□□□ -0.46
DDX54-204ENST00000546898 EEF1AKMT3Q96AZ1 226 aa12.15□□□□□ -0.46
DDX54-204ENST00000546898 CXorf58Q96LI9 332 aa12.15□□□□□ -0.46
DDX54-204ENST00000546898 NDUFA4L2Q9NRX3 87 aa12.15□□□□□ -0.46
DDX54-204ENST00000546898 TMEM14BQ9NUH8 114 aa12.15□□□□□ -0.46
DDX54-204ENST00000546898 SIGLEC8Q9NYZ4 499 aa12.15□□□□□ -0.46
DDX54-204ENST00000546898 THYN1Q9P016 225 aa12.15□□□□□ -0.46
DDX54-204ENST00000546898 COPZ2Q9P299 210 aa12.15□□□□□ -0.46
DDX54-204ENST00000546898 PEMTQ9UBM1 199 aa12.15□□□□□ -0.46
DDX54-204ENST00000546898 OR51B2Q9Y5P1 312 aa12.15□□□□□ -0.46
DDX54-204ENST00000546898 ZNF701M0R085 212 aaPredicted RBP12.14□□□□□ -0.47
DDX54-204ENST00000546898 B3GALNT1O75752 331 aa12.14□□□□□ -0.47
DDX54-204ENST00000546898 NDUFB8O95169 186 aa12.14□□□□□ -0.47
DDX54-204ENST00000546898 IGKV1-39P01597 117 aa12.14□□□□□ -0.47
DDX54-204ENST00000546898 IGKV1D-39P04432 117 aa12.14□□□□□ -0.47
DDX54-204ENST00000546898 CTSDP07339 412 aaPredicted RBP12.14□□□□□ -0.47
DDX54-204ENST00000546898 SPNP16150 400 aa12.14□□□□□ -0.47
DDX54-204ENST00000546898 TNFSF8P32971 234 aa12.14□□□□□ -0.47
DDX54-204ENST00000546898 CD69Q07108 199 aa12.14□□□□□ -0.47
DDX54-204ENST00000546898 SURF2Q15527 256 aaPredicted RBP12.14□□□□□ -0.47
DDX54-204ENST00000546898 H2BFWTQ7Z2G1 175 aa12.14□□□□□ -0.47
DDX54-204ENST00000546898 OR13C8Q8NGS7 320 aa12.14□□□□□ -0.47
DDX54-204ENST00000546898 TMEM56Q96MV1 263 aa12.14□□□□□ -0.47
DDX54-204ENST00000546898 RBM38Q9H0Z9 239 aaKnown RBP12.14□□□□□ -0.47
DDX54-204ENST00000546898 NSG2Q9Y328 171 aa12.14□□□□□ -0.47
DDX54-204ENST00000546898 TRBV7-1A0A0A6YYK4 115 aa12.13□□□□□ -0.47
DDX54-204ENST00000546898 FABP12A6NFH5 140 aa12.13□□□□□ -0.47
DDX54-204ENST00000546898 GGCTO75223 188 aaKnown RBP12.13□□□□□ -0.47
DDX54-204ENST00000546898 ATG12O94817 140 aa12.13□□□□□ -0.47
DDX54-204ENST00000546898 OR13C7P0DN81 318 aa12.13□□□□□ -0.47
DDX54-204ENST00000546898 GP9P14770 177 aa12.13□□□□□ -0.47
DDX54-204ENST00000546898 PI3P19957 117 aa12.13□□□□□ -0.47
DDX54-204ENST00000546898 WT1-ASQ06250 92 aa12.13□□□□□ -0.47
DDX54-204ENST00000546898 OR10W1Q8NGF6 305 aa12.13□□□□□ -0.47
DDX54-204ENST00000546898 OR4C16Q8NGL9 310 aa12.13□□□□□ -0.47
DDX54-204ENST00000546898 OR4A16Q8NH70 328 aa12.13□□□□□ -0.47
DDX54-204ENST00000546898 MARCH1Q8TCQ1 289 aa12.13□□□□□ -0.47
DDX54-204ENST00000546898 MRGPRFQ96AM1 343 aa12.13□□□□□ -0.47
DDX54-204ENST00000546898 CCDC140Q96MF4 163 aa12.13□□□□□ -0.47
DDX54-204ENST00000546898 PRRT1Q99946 306 aa12.13□□□□□ -0.47
DDX54-204ENST00000546898 SOSTQ9BQB4 213 aa12.13□□□□□ -0.47
DDX54-204ENST00000546898 HINT2Q9BX68 163 aa12.13□□□□□ -0.47
DDX54-204ENST00000546898 C14orf166Q9Y224 244 aaKnown RBP12.13□□□□□ -0.47
DDX54-204ENST00000546898 DMRT1Q9Y5R6 373 aa12.13□□□□□ -0.47
DDX54-204ENST00000546898 C3orf85A0A1B0GTC6 90 aa12.12□□□□□ -0.47
DDX54-204ENST00000546898 ANKRD20A5PA0PJZ0 165 aa12.12□□□□□ -0.47
DDX54-204ENST00000546898 PPP5D1E7EU14 171 aa12.12□□□□□ -0.47
DDX54-204ENST00000546898 ARL3P36405 182 aa12.12□□□□□ -0.47
DDX54-204ENST00000546898 FAAP20Q6NZ36 180 aa12.12□□□□□ -0.47
DDX54-204ENST00000546898 IL34Q6ZMJ4 242 aa12.12□□□□□ -0.47
DDX54-204ENST00000546898 OR1L6Q8NGR2 347 aa12.12□□□□□ -0.47
DDX54-204ENST00000546898 TP53RKQ96S44 253 aa12.12□□□□□ -0.47
DDX54-204ENST00000546898 SLC2A8Q9NY64 477 aa12.12□□□□□ -0.47
DDX54-204ENST00000546898 F11RQ9Y624 299 aaKnown RBP12.12□□□□□ -0.47
DDX54-204ENST00000546898 SMAD5-AS1Q9Y6J3 95 aa12.12□□□□□ -0.47
DDX54-204ENST00000546898 MFSD2BA6NFX1 497 aa12.11□□□□□ -0.47
DDX54-204ENST00000546898 LGALS9O00182 355 aa12.11□□□□□ -0.47
DDX54-204ENST00000546898 CSN3P07498 182 aa12.11□□□□□ -0.47
DDX54-204ENST00000546898 UCP1P25874 307 aa12.11□□□□□ -0.47
DDX54-204ENST00000546898 S100A5P33763 92 aa12.11□□□□□ -0.47
DDX54-204ENST00000546898 AKR1C2P52895 323 aa12.11□□□□□ -0.47
DDX54-204ENST00000546898 CLEC19AQ6UXS0 136 aa12.11□□□□□ -0.47
DDX54-204ENST00000546898 VN1R17PQ8TDU5 208 aa12.11□□□□□ -0.47
DDX54-204ENST00000546898 COL7A1Q02388 2944 aa12.1□□□□□ -0.47
DDX54-204ENST00000546898 DBX1A6NMT0 343 aa12.1□□□□□ -0.47
DDX54-204ENST00000546898 IGHV3-23P01764 117 aa12.1□□□□□ -0.47
DDX54-204ENST00000546898 MECP2P51608 486 aaKnown RBP12.1□□□□□ -0.47
DDX54-204ENST00000546898 PRCDQ00LT1 54 aa12.1□□□□□ -0.47
DDX54-204ENST00000546898 TRIM16LQ309B1 348 aa12.1□□□□□ -0.47
DDX54-204ENST00000546898 HAPLN4Q86UW8 402 aa12.1□□□□□ -0.47
DDX54-204ENST00000546898 GPHB5Q86YW7 130 aa12.1□□□□□ -0.47
DDX54-204ENST00000546898 OR2K2Q8NGT1 345 aa12.1□□□□□ -0.47
DDX54-204ENST00000546898 ZNF502Q8TBZ5 544 aa12.1□□□□□ -0.47
DDX54-204ENST00000546898 ATP6V0BQ99437 205 aa12.1□□□□□ -0.47
DDX54-204ENST00000546898 SCP2D1Q9UJQ7 156 aa12.1□□□□□ -0.47
DDX54-204ENST00000546898 S4R3C0 116 aa12.1□□□□□ -0.47
DDX54-204ENST00000546898 IGKV1-5P01602 117 aa12.09□□□□□ -0.47
DDX54-204ENST00000546898 P0C879 139 aa12.09□□□□□ -0.47
DDX54-204ENST00000546898 HSPE1P61604 102 aaKnown RBP12.09□□□□□ -0.47
DDX54-204ENST00000546898 LCN12Q6JVE5 192 aa12.09□□□□□ -0.47
DDX54-204ENST00000546898 SLC25A24Q6NUK1 477 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 249.2 ms