RNA–Protein interactions for RNA: ENST00000546215.5

SCARB1-211, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARB1, Length 1,597 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-211ENST00000546215 A0A1W2PRX2 142 aa16.19■□□□□ 0.18
SCARB1-211ENST00000546215 C9orf170A2RU37 121 aa16.19■□□□□ 0.18
SCARB1-211ENST00000546215 LYZL2Q7Z4W2 148 aa16.19■□□□□ 0.18
SCARB1-211ENST00000546215 ZNF429Q86V71 674 aa16.19■□□□□ 0.18
SCARB1-211ENST00000546215 LRTM2Q8N967 370 aa16.19■□□□□ 0.18
SCARB1-211ENST00000546215 RNASE11Q8TAA1 199 aaKnown RBP16.19■□□□□ 0.18
SCARB1-211ENST00000546215 SHPKQ9UHJ6 478 aa16.19■□□□□ 0.18
SCARB1-211ENST00000546215 PKD1L1Q8TDX9 2849 aa16.19■□□□□ 0.18
SCARB1-211ENST00000546215 IGLC7A0M8Q6 106 aa16.18■□□□□ 0.18
SCARB1-211ENST00000546215 H3BUA1 57 aa16.18■□□□□ 0.18
SCARB1-211ENST00000546215 M0QZ24 198 aa16.18■□□□□ 0.18
SCARB1-211ENST00000546215 BRI3O95415 125 aa16.18■□□□□ 0.18
SCARB1-211ENST00000546215 HLA-AP01891 365 aaKnown RBP16.18■□□□□ 0.18
SCARB1-211ENST00000546215 TRAPPC2P0DI81 140 aa16.18■□□□□ 0.18
SCARB1-211ENST00000546215 TRAPPC2BP0DI82 140 aa16.18■□□□□ 0.18
SCARB1-211ENST00000546215 AREGP15514 252 aa16.18■□□□□ 0.18
SCARB1-211ENST00000546215 DHRS2Q13268 280 aa16.18■□□□□ 0.18
SCARB1-211ENST00000546215 C2orf68Q2NKX9 166 aa16.18■□□□□ 0.18
SCARB1-211ENST00000546215 OR10W1Q8NGF6 305 aa16.18■□□□□ 0.18
SCARB1-211ENST00000546215 GPR146Q96CH1 333 aa16.18■□□□□ 0.18
SCARB1-211ENST00000546215 MS4A10Q96PG2 267 aa16.18■□□□□ 0.18
SCARB1-211ENST00000546215 SRSF8Q9BRL6 282 aaKnown RBP16.18■□□□□ 0.18
SCARB1-211ENST00000546215 ZNF257Q9Y2Q1 563 aa16.18■□□□□ 0.18
SCARB1-211ENST00000546215 NPIPB5A8MRT5 1133 aa16.17■□□□□ 0.18
SCARB1-211ENST00000546215 RBMXL2O75526 392 aaKnown RBP16.17■□□□□ 0.18
SCARB1-211ENST00000546215 CRYGCP07315 174 aa16.17■□□□□ 0.18
SCARB1-211ENST00000546215 CDX1P47902 265 aaPredicted RBP16.17■□□□□ 0.18
SCARB1-211ENST00000546215 THOC7Q6I9Y2 204 aaKnown RBP16.17■□□□□ 0.18
SCARB1-211ENST00000546215 C18orf65Q6ZTR6 163 aa16.17■□□□□ 0.18
SCARB1-211ENST00000546215 ZNF491Q8N8L2 437 aa16.17■□□□□ 0.18
SCARB1-211ENST00000546215 DUSP18Q8NEJ0 188 aa16.17■□□□□ 0.18
SCARB1-211ENST00000546215 SLA2Q9H6Q3 261 aa16.17■□□□□ 0.18
SCARB1-211ENST00000546215 ZNF355PQ9NSJ1 428 aa16.17■□□□□ 0.18
SCARB1-211ENST00000546215 COA4Q9NYJ1 87 aa16.17■□□□□ 0.18
SCARB1-211ENST00000546215 H2AFB2P0C5Z0 115 aa16.17■□□□□ 0.18
SCARB1-211ENST00000546215 CTRB1P17538 263 aa16.17■□□□□ 0.18
SCARB1-211ENST00000546215 PSMB6P28072 239 aa16.17■□□□□ 0.18
SCARB1-211ENST00000546215 MECP2P51608 486 aaKnown RBP16.17■□□□□ 0.18
SCARB1-211ENST00000546215 DEFA1P59665 94 aa16.17■□□□□ 0.18
SCARB1-211ENST00000546215 DEFA3P59666 94 aa16.17■□□□□ 0.18
SCARB1-211ENST00000546215 HSPE1P61604 102 aaKnown RBP16.17■□□□□ 0.18
SCARB1-211ENST00000546215 C4orf46Q504U0 113 aa16.17■□□□□ 0.18
SCARB1-211ENST00000546215 NMSQ5H8A3 153 aa16.17■□□□□ 0.18
SCARB1-211ENST00000546215 CTRB2Q6GPI1 263 aa16.17■□□□□ 0.18
SCARB1-211ENST00000546215 NRARPQ7Z6K4 114 aa16.17■□□□□ 0.18
SCARB1-211ENST00000546215 LYG2Q86SG7 212 aa16.17■□□□□ 0.18
SCARB1-211ENST00000546215 ENKURQ8TC29 256 aa16.17■□□□□ 0.18
SCARB1-211ENST00000546215 UBE2E2Q96LR5 201 aa16.17■□□□□ 0.18
SCARB1-211ENST00000546215 PIGBOS1A0A0B4J2F0 54 aa16.16■□□□□ 0.18
SCARB1-211ENST00000546215 DUXBA0A1W2PPF3 345 aa16.16■□□□□ 0.18
SCARB1-211ENST00000546215 ST8SIA3O43173 380 aa16.16■□□□□ 0.18
SCARB1-211ENST00000546215 REG1AP05451 166 aa16.16■□□□□ 0.18
SCARB1-211ENST00000546215 WT1-ASQ06250 92 aa16.16■□□□□ 0.18
SCARB1-211ENST00000546215 C19orf35Q6ZS72 473 aa16.16■□□□□ 0.18
SCARB1-211ENST00000546215 HINT2Q9BX68 163 aa16.16■□□□□ 0.18
SCARB1-211ENST00000546215 CACNG5Q9UF02 275 aa16.16■□□□□ 0.18
SCARB1-211ENST00000546215 DUS4LO95620 317 aaKnown RBP16.15■□□□□ 0.18
SCARB1-211ENST00000546215 TSPAN15O95858 294 aa16.15■□□□□ 0.18
SCARB1-211ENST00000546215 PRH1P02810 166 aa16.15■□□□□ 0.18
SCARB1-211ENST00000546215 TRGV3P03979 118 aa16.15■□□□□ 0.18
SCARB1-211ENST00000546215 RAB25P57735 213 aa16.15■□□□□ 0.18
SCARB1-211ENST00000546215 TPPP2P59282 170 aa16.15■□□□□ 0.18
SCARB1-211ENST00000546215 AARDQ4LEZ3 155 aa16.15■□□□□ 0.18
SCARB1-211ENST00000546215 HSD17B13Q7Z5P4 300 aaPredicted RBP16.15■□□□□ 0.18
SCARB1-211ENST00000546215 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.15■□□□□ 0.18
SCARB1-211ENST00000546215 TRBV9A0A0B4J1U6 114 aa16.14■□□□□ 0.17
SCARB1-211ENST00000546215 PRCDQ00LT1 54 aa16.14■□□□□ 0.17
SCARB1-211ENST00000546215 KLHL30-AS1Q8NEE0 82 aa16.14■□□□□ 0.17
SCARB1-211ENST00000546215 OR52B4Q8NGK2 314 aa16.14■□□□□ 0.17
SCARB1-211ENST00000546215 GNB4Q9HAV0 340 aa16.14■□□□□ 0.17
SCARB1-211ENST00000546215 OR13C7P0DN81 318 aa16.13■□□□□ 0.17
SCARB1-211ENST00000546215 KLK9Q2XQG4 91 aa16.13■□□□□ 0.17
SCARB1-211ENST00000546215 C8orf86Q6ZUL3 223 aa16.13■□□□□ 0.17
SCARB1-211ENST00000546215 KLK9Q9UKQ9 250 aa16.13■□□□□ 0.17
SCARB1-211ENST00000546215 NUDT19A8MXV4 375 aa16.13■□□□□ 0.17
SCARB1-211ENST00000546215 IFNA17P01571 189 aa16.13■□□□□ 0.17
SCARB1-211ENST00000546215 SULT1A3P0DMM9 295 aa16.13■□□□□ 0.17
SCARB1-211ENST00000546215 SULT1A4P0DMN0 295 aa16.13■□□□□ 0.17
SCARB1-211ENST00000546215 PRR31Q5SQ13 230 aa16.13■□□□□ 0.17
SCARB1-211ENST00000546215 OR4F17Q8NGA8 305 aa16.13■□□□□ 0.17
SCARB1-211ENST00000546215 COQ8AQ8NI60 647 aa16.13■□□□□ 0.17
SCARB1-211ENST00000546215 MITD1Q8WV92 249 aa16.13■□□□□ 0.17
SCARB1-211ENST00000546215 C4orf3Q8WVX3 66 aa16.13■□□□□ 0.17
SCARB1-211ENST00000546215 FANCD2OSQ96PS1 177 aa16.13■□□□□ 0.17
SCARB1-211ENST00000546215 OR4F4Q96R69 305 aa16.13■□□□□ 0.17
SCARB1-211ENST00000546215 TMED3Q9Y3Q3 217 aa16.13■□□□□ 0.17
SCARB1-211ENST00000546215 I3L521 148 aa16.12■□□□□ 0.17
SCARB1-211ENST00000546215 DEFA5Q01523 94 aa16.12■□□□□ 0.17
SCARB1-211ENST00000546215 OR52E5Q8NH55 327 aa16.12■□□□□ 0.17
SCARB1-211ENST00000546215 A0A1B0GU03 582 aa16.11■□□□□ 0.17
SCARB1-211ENST00000546215 DHFRP00374 187 aa16.11■□□□□ 0.17
SCARB1-211ENST00000546215 HOXB5P09067 269 aa16.11■□□□□ 0.17
SCARB1-211ENST00000546215 SMCO1Q147U7 214 aa16.11■□□□□ 0.17
SCARB1-211ENST00000546215 PDLIM3Q53GG5 364 aaPredicted RBP16.11■□□□□ 0.17
SCARB1-211ENST00000546215 SPINK9Q5DT21 86 aa16.11■□□□□ 0.17
SCARB1-211ENST00000546215 USMG5Q96IX5 58 aa16.11■□□□□ 0.17
SCARB1-211ENST00000546215 SEC22CQ9BRL7 303 aa16.11■□□□□ 0.17
SCARB1-211ENST00000546215 PDCD10Q9BUL8 212 aa16.11■□□□□ 0.17
SCARB1-211ENST00000546215 PLEKHA3Q9HB20 300 aa16.11■□□□□ 0.17
SCARB1-211ENST00000546215 DMRT1Q9Y5R6 373 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms