RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 IGLV11-55A0A075B6I3 123 aa9.1□□□□□ -0.95
YBX3-217ENST00000546164 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.1□□□□□ -0.95
YBX3-217ENST00000546164 TEX50A0A1B0GTY4 177 aa9.1□□□□□ -0.95
YBX3-217ENST00000546164 ANKRD20A5PA0PJZ0 165 aa9.1□□□□□ -0.95
YBX3-217ENST00000546164 ANKRD34BA5PLL1 514 aa9.1□□□□□ -0.95
YBX3-217ENST00000546164 DISC1C4P0D8 188 aa9.1□□□□□ -0.95
YBX3-217ENST00000546164 B3GALNT1O75752 331 aa9.1□□□□□ -0.95
YBX3-217ENST00000546164 SNAPC5O75971 98 aa9.1□□□□□ -0.95
YBX3-217ENST00000546164 OR2J3O76001 311 aa9.1□□□□□ -0.95
YBX3-217ENST00000546164 IGKV1-39P01597 117 aa9.1□□□□□ -0.95
YBX3-217ENST00000546164 TRBV12-3P01733 135 aa9.1□□□□□ -0.95
YBX3-217ENST00000546164 IGKV1D-39P04432 117 aa9.1□□□□□ -0.95
YBX3-217ENST00000546164 SERPINE2P07093 398 aa9.1□□□□□ -0.95
YBX3-217ENST00000546164 TRAPPC2P0DI81 140 aa9.1□□□□□ -0.95
YBX3-217ENST00000546164 TRAPPC2BP0DI82 140 aa9.1□□□□□ -0.95
YBX3-217ENST00000546164 PI3P19957 117 aa9.1□□□□□ -0.95
YBX3-217ENST00000546164 PPP5CP53041 499 aa9.1□□□□□ -0.95
YBX3-217ENST00000546164 EXOSC2Q13868 293 aaKnown RBP9.1□□□□□ -0.95
YBX3-217ENST00000546164 C15orf32Q32M92 178 aa9.1□□□□□ -0.95
YBX3-217ENST00000546164 SCGB2B2Q4G0G5 96 aa9.1□□□□□ -0.95
YBX3-217ENST00000546164 C19orf35Q6ZS72 473 aa9.1□□□□□ -0.95
YBX3-217ENST00000546164 CCDC71LQ8N9Z2 235 aa9.1□□□□□ -0.95
YBX3-217ENST00000546164 OR4C16Q8NGL9 310 aa9.1□□□□□ -0.95
YBX3-217ENST00000546164 OR13C8Q8NGS7 320 aa9.1□□□□□ -0.95
YBX3-217ENST00000546164 OR5B3Q8NH48 314 aa9.1□□□□□ -0.95
YBX3-217ENST00000546164 PRRT1Q99946 306 aa9.1□□□□□ -0.95
YBX3-217ENST00000546164 NDUFA4L2Q9NRX3 87 aa9.1□□□□□ -0.95
YBX3-217ENST00000546164 TMEM14BQ9NUH8 114 aa9.1□□□□□ -0.95
YBX3-217ENST00000546164 FKBP11Q9NYL4 201 aa9.1□□□□□ -0.95
YBX3-217ENST00000546164 PRNDQ9UKY0 176 aa9.1□□□□□ -0.95
YBX3-217ENST00000546164 V9GYH0 126 aa9.1□□□□□ -0.95
YBX3-217ENST00000546164 SORL1Q92673 2214 aa9.1□□□□□ -0.95
YBX3-217ENST00000546164 C15orf61A6NNL5 157 aa9.09□□□□□ -0.95
YBX3-217ENST00000546164 SAP30O75446 220 aa9.09□□□□□ -0.95
YBX3-217ENST00000546164 DCTN2Q13561 401 aaKnown RBP9.09□□□□□ -0.95
YBX3-217ENST00000546164 FAAP20Q6NZ36 180 aa9.09□□□□□ -0.95
YBX3-217ENST00000546164 CCDC190Q86UF4 302 aa9.09□□□□□ -0.95
YBX3-217ENST00000546164 MARCH1Q8TCQ1 289 aa9.09□□□□□ -0.95
YBX3-217ENST00000546164 LSM10Q969L4 123 aaKnown RBP9.09□□□□□ -0.95
YBX3-217ENST00000546164 TP53RKQ96S44 253 aa9.09□□□□□ -0.95
YBX3-217ENST00000546164 COPZ2Q9P299 210 aa9.09□□□□□ -0.95
YBX3-217ENST00000546164 FBXL7Q9UJT9 491 aa9.09□□□□□ -0.95
YBX3-217ENST00000546164 OR51B2Q9Y5P1 312 aa9.09□□□□□ -0.95
YBX3-217ENST00000546164 DMRT1Q9Y5R6 373 aa9.09□□□□□ -0.95
YBX3-217ENST00000546164 C3orf85A0A1B0GTC6 90 aa9.08□□□□□ -0.96
YBX3-217ENST00000546164 DBX1A6NMT0 343 aa9.08□□□□□ -0.96
YBX3-217ENST00000546164 BMPR1BO00238 502 aa9.08□□□□□ -0.96
YBX3-217ENST00000546164 ATG12O94817 140 aa9.08□□□□□ -0.96
YBX3-217ENST00000546164 NDUFB8O95169 186 aa9.08□□□□□ -0.96
YBX3-217ENST00000546164 REG1AP05451 166 aa9.08□□□□□ -0.96
YBX3-217ENST00000546164 P0C879 139 aa9.08□□□□□ -0.96
YBX3-217ENST00000546164 DEFA4P12838 97 aa9.08□□□□□ -0.96
YBX3-217ENST00000546164 UCP1P25874 307 aa9.08□□□□□ -0.96
YBX3-217ENST00000546164 S100A5P33763 92 aa9.08□□□□□ -0.96
YBX3-217ENST00000546164 ETV6P41212 452 aa9.08□□□□□ -0.96
YBX3-217ENST00000546164 WT1-ASQ06250 92 aa9.08□□□□□ -0.96
YBX3-217ENST00000546164 TATDN3Q17R31 274 aa9.08□□□□□ -0.96
YBX3-217ENST00000546164 H2BFWTQ7Z2G1 175 aa9.08□□□□□ -0.96
YBX3-217ENST00000546164 GDPD1Q8N9F7 314 aa9.08□□□□□ -0.96
YBX3-217ENST00000546164 OR10W1Q8NGF6 305 aa9.08□□□□□ -0.96
YBX3-217ENST00000546164 OR9G4Q8NGQ1 327 aa9.08□□□□□ -0.96
YBX3-217ENST00000546164 OR6Q1Q8NGQ2 317 aa9.08□□□□□ -0.96
YBX3-217ENST00000546164 TRIM63Q969Q1 353 aa9.08□□□□□ -0.96
YBX3-217ENST00000546164 OR4C12Q96R67 309 aa9.08□□□□□ -0.96
YBX3-217ENST00000546164 RTBDNQ9BSG5 229 aaPredicted RBP9.08□□□□□ -0.96
YBX3-217ENST00000546164 THAP7Q9BT49 309 aaPredicted RBP9.08□□□□□ -0.96
YBX3-217ENST00000546164 ELOVL1Q9BW60 279 aa9.08□□□□□ -0.96
YBX3-217ENST00000546164 C5orf66Q9H5L9 145 aa9.08□□□□□ -0.96
YBX3-217ENST00000546164 SIGLEC8Q9NYZ4 499 aa9.08□□□□□ -0.96
YBX3-217ENST00000546164 GPR132Q9UNW8 380 aa9.08□□□□□ -0.96
YBX3-217ENST00000546164 ZNF256Q9Y2P7 627 aaPredicted RBP9.08□□□□□ -0.96
YBX3-217ENST00000546164 NSG2Q9Y328 171 aa9.08□□□□□ -0.96
YBX3-217ENST00000546164 CYB5BO43169 146 aa9.07□□□□□ -0.96
YBX3-217ENST00000546164 IGKV1-5P01602 117 aa9.07□□□□□ -0.96
YBX3-217ENST00000546164 OR13C7P0DN81 318 aa9.07□□□□□ -0.96
YBX3-217ENST00000546164 SYNJ2BPP57105 145 aa9.07□□□□□ -0.96
YBX3-217ENST00000546164 ZNF79Q15937 498 aa9.07□□□□□ -0.96
YBX3-217ENST00000546164 RPEL1Q2QD12 228 aa9.07□□□□□ -0.96
YBX3-217ENST00000546164 IL34Q6ZMJ4 242 aa9.07□□□□□ -0.96
YBX3-217ENST00000546164 OR51S1Q8NGJ8 323 aa9.07□□□□□ -0.96
YBX3-217ENST00000546164 DEDD2Q8WXF8 326 aa9.07□□□□□ -0.96
YBX3-217ENST00000546164 EEF1AKMT3Q96AZ1 226 aa9.07□□□□□ -0.96
YBX3-217ENST00000546164 CXorf58Q96LI9 332 aa9.07□□□□□ -0.96
YBX3-217ENST00000546164 CCDC140Q96MF4 163 aa9.07□□□□□ -0.96
YBX3-217ENST00000546164 TMEM56Q96MV1 263 aa9.07□□□□□ -0.96
YBX3-217ENST00000546164 THYN1Q9P016 225 aa9.07□□□□□ -0.96
YBX3-217ENST00000546164 SCP2D1Q9UJQ7 156 aa9.07□□□□□ -0.96
YBX3-217ENST00000546164 C14orf166Q9Y224 244 aaKnown RBP9.07□□□□□ -0.96
YBX3-217ENST00000546164 LSM4Q9Y4Z0 139 aaKnown RBP9.07□□□□□ -0.96
YBX3-217ENST00000546164 TRBV7-1A0A0A6YYK4 115 aa9.06□□□□□ -0.96
YBX3-217ENST00000546164 GGCTO75223 188 aaKnown RBP9.06□□□□□ -0.96
YBX3-217ENST00000546164 IGLV1-51P01701 117 aa9.06□□□□□ -0.96
YBX3-217ENST00000546164 AP3S2P59780 193 aa9.06□□□□□ -0.96
YBX3-217ENST00000546164 HSPE1P61604 102 aaKnown RBP9.06□□□□□ -0.96
YBX3-217ENST00000546164 KLF9Q13886 244 aaPredicted RBP9.06□□□□□ -0.96
YBX3-217ENST00000546164 Q8N402 240 aa9.06□□□□□ -0.96
YBX3-217ENST00000546164 OR1L6Q8NGR2 347 aa9.06□□□□□ -0.96
YBX3-217ENST00000546164 OR4A16Q8NH70 328 aa9.06□□□□□ -0.96
YBX3-217ENST00000546164 VN1R17PQ8TDU5 208 aa9.06□□□□□ -0.96
YBX3-217ENST00000546164 SCGB3A2Q96PL1 93 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms