RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 RPL23P62829 140 aaKnown RBP8.19□□□□□ -1.1
TRAF1-203ENST00000546084 SUMO1P63165 101 aaKnown RBP8.19□□□□□ -1.1
TRAF1-203ENST00000546084 ZNF324BQ6AW86 544 aaPredicted RBP8.19□□□□□ -1.1
TRAF1-203ENST00000546084 GTF2H5Q6ZYL4 71 aa8.19□□□□□ -1.1
TRAF1-203ENST00000546084 Q8IYB0 196 aa8.19□□□□□ -1.1
TRAF1-203ENST00000546084 RPP25LQ8N5L8 163 aaKnown RBP8.19□□□□□ -1.1
TRAF1-203ENST00000546084 SGMS2Q8NHU3 365 aa8.19□□□□□ -1.1
TRAF1-203ENST00000546084 TMEM147Q9BVK8 224 aa8.19□□□□□ -1.1
TRAF1-203ENST00000546084 TRAPPC1Q9Y5R8 145 aa8.19□□□□□ -1.1
TRAF1-203ENST00000546084 C22orf46C9J442 243 aa8.18□□□□□ -1.1
TRAF1-203ENST00000546084 IFNL4K9M1U5 179 aa8.18□□□□□ -1.1
TRAF1-203ENST00000546084 CEACAM1P13688 526 aa8.18□□□□□ -1.1
TRAF1-203ENST00000546084 CCL3L1P16619 93 aa8.18□□□□□ -1.1
TRAF1-203ENST00000546084 RIPPLY3P57055 190 aa8.18□□□□□ -1.1
TRAF1-203ENST00000546084 CD81P60033 236 aa8.18□□□□□ -1.1
TRAF1-203ENST00000546084 IQCJQ1A5X6 159 aa8.18□□□□□ -1.1
TRAF1-203ENST00000546084 ZCCHC14Q8WYQ9 949 aaKnown RBP8.18□□□□□ -1.1
TRAF1-203ENST00000546084 P2RX4Q99571 388 aa8.18□□□□□ -1.1
TRAF1-203ENST00000546084 CLCF1Q9UBD9 225 aa8.18□□□□□ -1.1
TRAF1-203ENST00000546084 LINC00473A8K010 186 aa8.18□□□□□ -1.1
TRAF1-203ENST00000546084 KBTBD11O94819 623 aa8.18□□□□□ -1.1
TRAF1-203ENST00000546084 CHRNB4P30926 498 aa8.18□□□□□ -1.1
TRAF1-203ENST00000546084 SLAQ13239 276 aa8.18□□□□□ -1.1
TRAF1-203ENST00000546084 LRRC75BQ2VPJ9 315 aa8.18□□□□□ -1.1
TRAF1-203ENST00000546084 PCSK4Q6UW60 755 aa8.18□□□□□ -1.1
TRAF1-203ENST00000546084 SSBP3Q9BWW4 388 aaPredicted RBP8.18□□□□□ -1.1
TRAF1-203ENST00000546084 ZNF355PQ9NSJ1 428 aa8.18□□□□□ -1.1
TRAF1-203ENST00000546084 MLNRO43193 412 aa8.18□□□□□ -1.1
TRAF1-203ENST00000546084 SCGB2A1O75556 95 aa8.18□□□□□ -1.1
TRAF1-203ENST00000546084 DKK1O94907 266 aa8.18□□□□□ -1.1
TRAF1-203ENST00000546084 MT-CO2P00403 227 aa8.18□□□□□ -1.1
TRAF1-203ENST00000546084 ARL14EPLP0DKL9 152 aa8.18□□□□□ -1.1
TRAF1-203ENST00000546084 LMO1P25800 156 aa8.18□□□□□ -1.1
TRAF1-203ENST00000546084 HOXA6P31267 233 aa8.18□□□□□ -1.1
TRAF1-203ENST00000546084 ACSF3Q4G176 576 aaPredicted RBP8.18□□□□□ -1.1
TRAF1-203ENST00000546084 CYP2G1PQ6ZSU1 146 aa8.18□□□□□ -1.1
TRAF1-203ENST00000546084 FOXL2NBQ6ZUU3 175 aa8.18□□□□□ -1.1
TRAF1-203ENST00000546084 ST6GALNAC3Q8NDV1 305 aa8.18□□□□□ -1.1
TRAF1-203ENST00000546084 SMIM12Q96EX1 92 aa8.18□□□□□ -1.1
TRAF1-203ENST00000546084 NEIL1Q96FI4 390 aaPredicted RBP8.18□□□□□ -1.1
TRAF1-203ENST00000546084 MS4A10Q96PG2 267 aa8.18□□□□□ -1.1
TRAF1-203ENST00000546084 LPAR2Q9HBW0 351 aa8.18□□□□□ -1.1
TRAF1-203ENST00000546084 SLC35D1Q9NTN3 355 aa8.18□□□□□ -1.1
TRAF1-203ENST00000546084 A0A1B0GW15 77 aa8.17□□□□□ -1.1
TRAF1-203ENST00000546084 EREGO14944 169 aa8.17□□□□□ -1.1
TRAF1-203ENST00000546084 HRASP01112 189 aa8.17□□□□□ -1.1
TRAF1-203ENST00000546084 IER3P46695 156 aa8.17□□□□□ -1.1
TRAF1-203ENST00000546084 RND2P52198 227 aa8.17□□□□□ -1.1
TRAF1-203ENST00000546084 RYDENQ9NUL5 291 aaKnown RBP8.17□□□□□ -1.1
TRAF1-203ENST00000546084 FKBP11Q9NYL4 201 aa8.17□□□□□ -1.1
TRAF1-203ENST00000546084 ZNF835Q9Y2P0 537 aa8.17□□□□□ -1.1
TRAF1-203ENST00000546084 TACC2O95359 2948 aa8.17□□□□□ -1.1
TRAF1-203ENST00000546084 DMXL1Q9Y485 3027 aa8.17□□□□□ -1.1
TRAF1-203ENST00000546084 LRRC30A6NM36 301 aa8.17□□□□□ -1.1
TRAF1-203ENST00000546084 LY6HO94772 140 aa8.17□□□□□ -1.1
TRAF1-203ENST00000546084 IGKV1-39P01597 117 aa8.17□□□□□ -1.1
TRAF1-203ENST00000546084 IGKV1D-39P04432 117 aa8.17□□□□□ -1.1
TRAF1-203ENST00000546084 STAG3L2P0CL84 134 aa8.17□□□□□ -1.1
TRAF1-203ENST00000546084 GZMHP20718 246 aa8.17□□□□□ -1.1
TRAF1-203ENST00000546084 SPRNQ5BIV9 151 aa8.17□□□□□ -1.1
TRAF1-203ENST00000546084 C10orf55Q5SWW7 151 aa8.17□□□□□ -1.1
TRAF1-203ENST00000546084 TAAR6Q96RI8 345 aa8.17□□□□□ -1.1
TRAF1-203ENST00000546084 C11orf1Q9H5F2 150 aa8.17□□□□□ -1.1
TRAF1-203ENST00000546084 TMEM140Q9NV12 185 aa8.17□□□□□ -1.1
TRAF1-203ENST00000546084 TMEM242Q9NWH2 141 aa8.17□□□□□ -1.1
TRAF1-203ENST00000546084 TRAV1-1A0A0B4J248 108 aa8.17□□□□□ -1.1
TRAF1-203ENST00000546084 OR4A8P0C604 315 aa8.17□□□□□ -1.1
TRAF1-203ENST00000546084 OR9G9P0C7N8 305 aa8.17□□□□□ -1.1
TRAF1-203ENST00000546084 C1QTNF9P0C862 333 aa8.17□□□□□ -1.1
TRAF1-203ENST00000546084 CNN1P51911 297 aaKnown RBP8.17□□□□□ -1.1
TRAF1-203ENST00000546084 RPL31P62899 125 aaKnown RBP8.17□□□□□ -1.1
TRAF1-203ENST00000546084 GABRA6Q16445 453 aa8.17□□□□□ -1.1
TRAF1-203ENST00000546084 PRSS8Q16651 343 aa8.17□□□□□ -1.1
TRAF1-203ENST00000546084 COL5A1-AS1Q5SY13 56 aa8.17□□□□□ -1.1
TRAF1-203ENST00000546084 TOMM20LQ6UXN7 152 aa8.17□□□□□ -1.1
TRAF1-203ENST00000546084 WDR82Q6UXN9 313 aa8.17□□□□□ -1.1
TRAF1-203ENST00000546084 MBD3L1Q8WWY6 194 aa8.17□□□□□ -1.1
TRAF1-203ENST00000546084 PSMG3Q9BT73 122 aaPredicted RBP8.17□□□□□ -1.1
TRAF1-203ENST00000546084 PXMP4Q9Y6I8 212 aa8.17□□□□□ -1.1
TRAF1-203ENST00000546084 CTXND1A0A1B0GTU2 59 aa8.16□□□□□ -1.1
TRAF1-203ENST00000546084 A8MWP6 167 aa8.16□□□□□ -1.1
TRAF1-203ENST00000546084 INO80CQ6PI98 192 aaPredicted RBP8.16□□□□□ -1.1
TRAF1-203ENST00000546084 ACP7Q6ZNF0 438 aa8.16□□□□□ -1.1
TRAF1-203ENST00000546084 Q6ZT83 130 aa8.16□□□□□ -1.1
TRAF1-203ENST00000546084 DOLPP1Q86YN1 238 aa8.16□□□□□ -1.1
TRAF1-203ENST00000546084 OR5R1Q8NH85 324 aa8.16□□□□□ -1.1
TRAF1-203ENST00000546084 RNF138Q8WVD3 245 aa8.16□□□□□ -1.1
TRAF1-203ENST00000546084 BTF3L4Q96K17 158 aa8.16□□□□□ -1.1
TRAF1-203ENST00000546084 J3QR06 171 aa8.16□□□□□ -1.1
TRAF1-203ENST00000546084 FCN1O00602 326 aa8.16□□□□□ -1.1
TRAF1-203ENST00000546084 IGKV1D-33P01593 117 aa8.16□□□□□ -1.1
TRAF1-203ENST00000546084 IGKV1-33P01594 117 aa8.16□□□□□ -1.1
TRAF1-203ENST00000546084 RANP62826 216 aaKnown RBP8.16□□□□□ -1.1
TRAF1-203ENST00000546084 GNB2P62879 340 aa8.16□□□□□ -1.1
TRAF1-203ENST00000546084 ZNF585BQ52M93 769 aa8.16□□□□□ -1.1
TRAF1-203ENST00000546084 MOB1BQ7L9L4 216 aa8.16□□□□□ -1.1
TRAF1-203ENST00000546084 ZNF645Q8N7E2 425 aa8.16□□□□□ -1.1
TRAF1-203ENST00000546084 HARBI1Q96MB7 349 aa8.16□□□□□ -1.1
TRAF1-203ENST00000546084 ASCL2Q99929 193 aa8.16□□□□□ -1.1
TRAF1-203ENST00000546084 NAT8BQ9UHF3 227 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms