RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 MARCH11A6NNE9 402 aa12.22□□□□□ -0.45
DDX55-212ENST00000544738 ZNF785A8K8V0 405 aa12.22□□□□□ -0.45
DDX55-212ENST00000544738 TPPPO94811 219 aa12.22□□□□□ -0.45
DDX55-212ENST00000544738 IGHV3-23P01764 117 aa12.22□□□□□ -0.45
DDX55-212ENST00000544738 APOA1P02647 267 aa12.22□□□□□ -0.45
DDX55-212ENST00000544738 RLN1P04808 185 aa12.22□□□□□ -0.45
DDX55-212ENST00000544738 CLEC3BP05452 202 aa12.22□□□□□ -0.45
DDX55-212ENST00000544738 CBLN1P23435 193 aa12.22□□□□□ -0.45
DDX55-212ENST00000544738 CD81P60033 236 aa12.22□□□□□ -0.45
DDX55-212ENST00000544738 LPCAT3Q6P1A2 487 aa12.22□□□□□ -0.45
DDX55-212ENST00000544738 CADM3Q8N126 398 aa12.22□□□□□ -0.45
DDX55-212ENST00000544738 DGCR14Q96DF8 476 aaKnown RBP12.22□□□□□ -0.45
DDX55-212ENST00000544738 NEURL2Q9BR09 285 aa12.22□□□□□ -0.45
DDX55-212ENST00000544738 RETNQ9HD89 108 aa12.22□□□□□ -0.45
DDX55-212ENST00000544738 COMMD3Q9UBI1 195 aa12.22□□□□□ -0.45
DDX55-212ENST00000544738 S4R3C0 116 aa12.22□□□□□ -0.45
DDX55-212ENST00000544738 HECTD4Q9Y4D8 3996 aa12.21□□□□□ -0.45
DDX55-212ENST00000544738 A8MWP6 167 aa12.21□□□□□ -0.45
DDX55-212ENST00000544738 GPR31O00270 319 aa12.21□□□□□ -0.45
DDX55-212ENST00000544738 TRAPPC2P0DI81 140 aa12.21□□□□□ -0.45
DDX55-212ENST00000544738 TRAPPC2BP0DI82 140 aa12.21□□□□□ -0.45
DDX55-212ENST00000544738 PTBP1P26599 531 aaKnown RBP eCLIP12.21□□□□□ -0.45
DDX55-212ENST00000544738 S100GP29377 79 aa12.21□□□□□ -0.45
DDX55-212ENST00000544738 LPAR6P43657 344 aa12.21□□□□□ -0.45
DDX55-212ENST00000544738 TSPAN5P62079 268 aa12.21□□□□□ -0.45
DDX55-212ENST00000544738 LYSMD2Q8IV50 215 aa12.21□□□□□ -0.45
DDX55-212ENST00000544738 OR1L8Q8NGR8 309 aa12.21□□□□□ -0.45
DDX55-212ENST00000544738 GPX8Q8TED1 209 aa12.21□□□□□ -0.45
DDX55-212ENST00000544738 FAM110AQ9BQ89 295 aa12.21□□□□□ -0.45
DDX55-212ENST00000544738 FUNDC2Q9BWH2 189 aa12.21□□□□□ -0.45
DDX55-212ENST00000544738 SCPEP1Q9HB40 452 aa12.21□□□□□ -0.45
DDX55-212ENST00000544738 SNAPC5O75971 98 aa12.2□□□□□ -0.46
DDX55-212ENST00000544738 EIF4EP06730 217 aaKnown RBP12.2□□□□□ -0.46
DDX55-212ENST00000544738 SERPINE2P07093 398 aa12.2□□□□□ -0.46
DDX55-212ENST00000544738 HLA-DMAP28067 261 aa12.2□□□□□ -0.46
DDX55-212ENST00000544738 HRH1P35367 487 aa12.2□□□□□ -0.46
DDX55-212ENST00000544738 GUCA2BQ16661 112 aa12.2□□□□□ -0.46
DDX55-212ENST00000544738 GDPD1Q8N9F7 314 aa12.2□□□□□ -0.46
DDX55-212ENST00000544738 ZNF502Q8TBZ5 544 aa12.2□□□□□ -0.46
DDX55-212ENST00000544738 VN1R17PQ8TDU5 208 aa12.2□□□□□ -0.46
DDX55-212ENST00000544738 FCAMRQ8WWV6 532 aa12.2□□□□□ -0.46
DDX55-212ENST00000544738 PLEKHA3Q9HB20 300 aa12.2□□□□□ -0.46
DDX55-212ENST00000544738 TEX50A0A1B0GTY4 177 aa12.19□□□□□ -0.46
DDX55-212ENST00000544738 MFSD2BA6NFX1 497 aa12.19□□□□□ -0.46
DDX55-212ENST00000544738 KRASP01116 189 aa12.19□□□□□ -0.46
DDX55-212ENST00000544738 OR13C7P0DN81 318 aa12.19□□□□□ -0.46
DDX55-212ENST00000544738 RPA2P15927 270 aa12.19□□□□□ -0.46
DDX55-212ENST00000544738 VBP1P61758 197 aa12.19□□□□□ -0.46
DDX55-212ENST00000544738 NCS1P62166 190 aa12.19□□□□□ -0.46
DDX55-212ENST00000544738 ZNF57Q68EA5 555 aaPredicted RBP12.19□□□□□ -0.46
DDX55-212ENST00000544738 PLET1Q6UQ28 207 aa12.19□□□□□ -0.46
DDX55-212ENST00000544738 LINC00322Q6ZN03 302 aaPredicted RBP12.19□□□□□ -0.46
DDX55-212ENST00000544738 SLC16A13Q7RTY0 426 aa12.19□□□□□ -0.46
DDX55-212ENST00000544738 OR10W1Q8NGF6 305 aa12.19□□□□□ -0.46
DDX55-212ENST00000544738 MARC2Q969Z3 335 aa12.19□□□□□ -0.46
DDX55-212ENST00000544738 TSC22D3Q99576 134 aa12.19□□□□□ -0.46
DDX55-212ENST00000544738 FAM212BQ9NTI7 297 aaPredicted RBP12.19□□□□□ -0.46
DDX55-212ENST00000544738 FKBP11Q9NYL4 201 aa12.19□□□□□ -0.46
DDX55-212ENST00000544738 CEPT1Q9Y6K0 416 aa12.19□□□□□ -0.46
DDX55-212ENST00000544738 TMEM213A2RRL7 107 aa12.18□□□□□ -0.46
DDX55-212ENST00000544738 CD7P09564 240 aa12.18□□□□□ -0.46
DDX55-212ENST00000544738 RCVRNP35243 200 aa12.18□□□□□ -0.46
DDX55-212ENST00000544738 RORCP51449 518 aa12.18□□□□□ -0.46
DDX55-212ENST00000544738 ZNF585BQ52M93 769 aa12.18□□□□□ -0.46
DDX55-212ENST00000544738 SLC25A24Q6NUK1 477 aa12.18□□□□□ -0.46
DDX55-212ENST00000544738 UXS1Q8NBZ7 420 aa12.18□□□□□ -0.46
DDX55-212ENST00000544738 OR5B3Q8NH48 314 aa12.18□□□□□ -0.46
DDX55-212ENST00000544738 LSM10Q969L4 123 aaKnown RBP12.18□□□□□ -0.46
DDX55-212ENST00000544738 WDR89Q96FK6 387 aaPredicted RBP12.18□□□□□ -0.46
DDX55-212ENST00000544738 TMEM56Q96MV1 263 aa12.18□□□□□ -0.46
DDX55-212ENST00000544738 ATP6V0BQ99437 205 aa12.18□□□□□ -0.46
DDX55-212ENST00000544738 FXYD6Q9H0Q3 95 aa12.18□□□□□ -0.46
DDX55-212ENST00000544738 NDUFA4L2Q9NRX3 87 aa12.18□□□□□ -0.46
DDX55-212ENST00000544738 PRNDQ9UKY0 176 aa12.18□□□□□ -0.46
DDX55-212ENST00000544738 UFC1Q9Y3C8 167 aa12.18□□□□□ -0.46
DDX55-212ENST00000544738 OR51B2Q9Y5P1 312 aa12.18□□□□□ -0.46
DDX55-212ENST00000544738 OR11H12B2RN74 326 aa12.17□□□□□ -0.46
DDX55-212ENST00000544738 EDN2P20800 178 aa12.17□□□□□ -0.46
DDX55-212ENST00000544738 GPR183P32249 361 aa12.17□□□□□ -0.46
DDX55-212ENST00000544738 G6PCP35575 357 aa12.17□□□□□ -0.46
DDX55-212ENST00000544738 ELLP55199 621 aaPredicted RBP12.17□□□□□ -0.46
DDX55-212ENST00000544738 UCP3P55916 312 aa12.17□□□□□ -0.46
DDX55-212ENST00000544738 WT1-ASQ06250 92 aa12.17□□□□□ -0.46
DDX55-212ENST00000544738 ANKRD55Q3KP44 614 aa12.17□□□□□ -0.46
DDX55-212ENST00000544738 MZT2AQ6P582 158 aa12.17□□□□□ -0.46
DDX55-212ENST00000544738 SNX29P2Q8IUI4 249 aa12.17□□□□□ -0.46
DDX55-212ENST00000544738 TMEM61Q8N0U2 210 aa12.17□□□□□ -0.46
DDX55-212ENST00000544738 OR1L6Q8NGR2 347 aa12.17□□□□□ -0.46
DDX55-212ENST00000544738 HINT2Q9BX68 163 aa12.17□□□□□ -0.46
DDX55-212ENST00000544738 MRPL27Q9P0M9 148 aaKnown RBP12.17□□□□□ -0.46
DDX55-212ENST00000544738 F11RQ9Y624 299 aaKnown RBP12.17□□□□□ -0.46
DDX55-212ENST00000544738 TRAV25A0A0B4J276 109 aa12.16□□□□□ -0.46
DDX55-212ENST00000544738 C8orf88P0DMB2 117 aa12.16□□□□□ -0.46
DDX55-212ENST00000544738 ELK1P19419 428 aa12.16□□□□□ -0.46
DDX55-212ENST00000544738 PHLDA2Q53GA4 152 aa12.16□□□□□ -0.46
DDX55-212ENST00000544738 SPSB3Q6PJ21 355 aa12.16□□□□□ -0.46
DDX55-212ENST00000544738 DEFB125Q8N687 156 aa12.16□□□□□ -0.46
DDX55-212ENST00000544738 CACNG8Q8WXS5 425 aa12.16□□□□□ -0.46
DDX55-212ENST00000544738 BSCL2Q96G97 398 aaPredicted RBP12.16□□□□□ -0.46
DDX55-212ENST00000544738 SRD5A3Q9H8P0 318 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms