RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 TNXAQ16473 311 aa24.29■■□□□ 1.48
CCM2-219ENST00000544363 C10orf55Q5SWW7 151 aa24.29■■□□□ 1.48
CCM2-219ENST00000544363 STPG2Q8N412 459 aa24.29■■□□□ 1.48
CCM2-219ENST00000544363 OR1S2Q8NGQ3 325 aa24.29■■□□□ 1.48
CCM2-219ENST00000544363 CREBBPQ92793 2442 aa24.29■■□□□ 1.48
CCM2-219ENST00000544363 CGB1A6NKQ9 187 aa24.28■■□□□ 1.48
CCM2-219ENST00000544363 C15orf62A8K5M9 175 aa24.28■■□□□ 1.48
CCM2-219ENST00000544363 SMAD7O15105 426 aaKnown RBP24.28■■□□□ 1.48
CCM2-219ENST00000544363 JTBO76095 146 aa24.28■■□□□ 1.48
CCM2-219ENST00000544363 IFNA10P01566 189 aa24.28■■□□□ 1.48
CCM2-219ENST00000544363 ARL16Q0P5N6 197 aa24.28■■□□□ 1.48
CCM2-219ENST00000544363 C5orf64Q2M2E5 130 aa24.28■■□□□ 1.48
CCM2-219ENST00000544363 ZNF767PQ75MW2 155 aa24.28■■□□□ 1.48
CCM2-219ENST00000544363 HAPLN4Q86UW8 402 aa24.28■■□□□ 1.48
CCM2-219ENST00000544363 FCN1O00602 326 aa24.28■■□□□ 1.48
CCM2-219ENST00000544363 IFNA7P01567 189 aa24.28■■□□□ 1.48
CCM2-219ENST00000544363 FBP1P09467 338 aa24.28■■□□□ 1.48
CCM2-219ENST00000544363 TPT1P13693 172 aaKnown RBP24.28■■□□□ 1.48
CCM2-219ENST00000544363 COMPP49747 757 aaPredicted RBP24.28■■□□□ 1.48
CCM2-219ENST00000544363 EXOSC2Q13868 293 aaKnown RBP24.28■■□□□ 1.48
CCM2-219ENST00000544363 CLINT1Q14677 625 aa24.28■■□□□ 1.48
CCM2-219ENST00000544363 SOX21Q9Y651 276 aaPredicted RBP24.28■■□□□ 1.48
CCM2-219ENST00000544363 A0A1W2PN81 502 aa24.27■■□□□ 1.48
CCM2-219ENST00000544363 PMS2P5A8MQ11 134 aa24.27■■□□□ 1.48
CCM2-219ENST00000544363 INS-IGF2F8WCM5 200 aa24.27■■□□□ 1.48
CCM2-219ENST00000544363 CHRNA7P36544 502 aa24.27■■□□□ 1.48
CCM2-219ENST00000544363 HBG1P69891 147 aa24.27■■□□□ 1.48
CCM2-219ENST00000544363 HBG2P69892 147 aa24.27■■□□□ 1.48
CCM2-219ENST00000544363 OR10W1Q8NGF6 305 aa24.27■■□□□ 1.48
CCM2-219ENST00000544363 C1RLQ9NZP8 487 aa24.27■■□□□ 1.48
CCM2-219ENST00000544363 CCDC168Q8NDH2 2452 aa24.27■■□□□ 1.48
CCM2-219ENST00000544363 NCBP2LA6PVI3 153 aaKnown RBP24.26■■□□□ 1.47
CCM2-219ENST00000544363 FSHBP01225 129 aa24.26■■□□□ 1.47
CCM2-219ENST00000544363 RPL27AP46776 148 aaKnown RBP24.26■■□□□ 1.47
CCM2-219ENST00000544363 EIF5AP63241 154 aaKnown RBP24.26■■□□□ 1.47
CCM2-219ENST00000544363 OR8G2PQ6IF36 304 aa24.26■■□□□ 1.47
CCM2-219ENST00000544363 BAP18Q8IXM2 172 aa24.26■■□□□ 1.47
CCM2-219ENST00000544363 NANPQ8TBE9 248 aa24.26■■□□□ 1.47
CCM2-219ENST00000544363 BORCS7-ASMTA0A0B4J1R7 106 aa24.25■■□□□ 1.47
CCM2-219ENST00000544363 A0A1B0GW64 132 aa24.25■■□□□ 1.47
CCM2-219ENST00000544363 GNB1P62873 340 aa24.25■■□□□ 1.47
CCM2-219ENST00000544363 UBAC2Q8NBM4 344 aa24.25■■□□□ 1.47
CCM2-219ENST00000544363 SLC24A4Q8NFF2 622 aa24.25■■□□□ 1.47
CCM2-219ENST00000544363 ABCA1O95477 2261 aa24.25■■□□□ 1.47
CCM2-219ENST00000544363 CA2P00918 260 aa24.24■■□□□ 1.47
CCM2-219ENST00000544363 PIFOQ8TCI5 191 aa24.24■■□□□ 1.47
CCM2-219ENST00000544363 ATP5SQ99766 215 aa24.24■■□□□ 1.47
CCM2-219ENST00000544363 SCAF4O95104 1147 aaKnown RBP24.24■■□□□ 1.47
CCM2-219ENST00000544363 OR8U8P0C7N1 319 aa24.24■■□□□ 1.47
CCM2-219ENST00000544363 SSBP2P81877 361 aaPredicted RBP24.24■■□□□ 1.47
CCM2-219ENST00000544363 ERHP84090 104 aaKnown RBP24.24■■□□□ 1.47
CCM2-219ENST00000544363 ZNF266Q14584 549 aa24.24■■□□□ 1.47
CCM2-219ENST00000544363 OR10P1Q8NGE3 313 aa24.24■■□□□ 1.47
CCM2-219ENST00000544363 TMEM170AQ8WVE7 144 aa24.24■■□□□ 1.47
CCM2-219ENST00000544363 SSX3Q99909 188 aa24.24■■□□□ 1.47
CCM2-219ENST00000544363 ITPR3Q14573 2671 aa24.23■■□□□ 1.47
CCM2-219ENST00000544363 DFFBO76075 338 aa24.23■■□□□ 1.47
CCM2-219ENST00000544363 NPY1RP25929 384 aa24.23■■□□□ 1.47
CCM2-219ENST00000544363 HTR2BP41595 481 aa24.23■■□□□ 1.47
CCM2-219ENST00000544363 RAB11AP62491 216 aa24.23■■□□□ 1.47
CCM2-219ENST00000544363 SLC38A11Q08AI6 406 aa24.23■■□□□ 1.47
CCM2-219ENST00000544363 LRRC75BQ2VPJ9 315 aa24.23■■□□□ 1.47
CCM2-219ENST00000544363 ALKAL2Q6UX46 152 aa24.23■■□□□ 1.47
CCM2-219ENST00000544363 PHYHIPLQ96FC7 376 aa24.23■■□□□ 1.47
CCM2-219ENST00000544363 UBQLN2Q9UHD9 624 aa24.23■■□□□ 1.47
CCM2-219ENST00000544363 PLXNB1O43157 2135 aa24.22■■□□□ 1.47
CCM2-219ENST00000544363 ATP5IP56385 69 aaPredicted RBP24.22■■□□□ 1.47
CCM2-219ENST00000544363 Q8N9W7 124 aa24.22■■□□□ 1.47
CCM2-219ENST00000544363 PINX1Q96BK5 328 aaKnown RBP24.22■■□□□ 1.47
CCM2-219ENST00000544363 WT1-ASQ06250 92 aa24.21■■□□□ 1.47
CCM2-219ENST00000544363 BSXQ3C1V8 233 aa24.21■■□□□ 1.47
CCM2-219ENST00000544363 ETV3LQ6ZN32 361 aa24.21■■□□□ 1.47
CCM2-219ENST00000544363 LILRB2Q8N423 598 aa24.21■■□□□ 1.47
CCM2-219ENST00000544363 SRSF12Q8WXF0 261 aaKnown RBP24.21■■□□□ 1.47
CCM2-219ENST00000544363 ARV1Q9H2C2 271 aa24.21■■□□□ 1.47
CCM2-219ENST00000544363 AKAP9Q99996 3911 aa24.21■■□□□ 1.47
CCM2-219ENST00000544363 CNIH1O95406 144 aa24.21■■□□□ 1.47
CCM2-219ENST00000544363 SNCAP37840 140 aa24.21■■□□□ 1.47
CCM2-219ENST00000544363 AANATQ16613 207 aa24.21■■□□□ 1.47
CCM2-219ENST00000544363 MRPL41Q8IXM3 137 aaKnown RBP24.21■■□□□ 1.47
CCM2-219ENST00000544363 SCARB1Q8WTV0 552 aa24.21■■□□□ 1.47
CCM2-219ENST00000544363 ZANQ9Y493 2812 aa24.2■■□□□ 1.46
CCM2-219ENST00000544363 ATP6V1FQ16864 119 aa24.2■■□□□ 1.46
CCM2-219ENST00000544363 C2orf83Q53S99 150 aa24.2■■□□□ 1.46
CCM2-219ENST00000544363 IGLC7A0M8Q6 106 aa24.19■■□□□ 1.46
CCM2-219ENST00000544363 IFNA4P05014 189 aa24.19■■□□□ 1.46
CCM2-219ENST00000544363 OR13C7P0DN81 318 aa24.19■■□□□ 1.46
CCM2-219ENST00000544363 RNASE2P10153 161 aaKnown RBP24.19■■□□□ 1.46
CCM2-219ENST00000544363 BCL6BQ8N143 479 aaPredicted RBP24.19■■□□□ 1.46
CCM2-219ENST00000544363 CELSR1Q9NYQ6 3014 aa24.18■■□□□ 1.46
CCM2-219ENST00000544363 ZNF469Q96JG9 3925 aaPredicted RBP24.18■■□□□ 1.46
CCM2-219ENST00000544363 TEX22C9J3V5 150 aa24.18■■□□□ 1.46
CCM2-219ENST00000544363 FXYD3Q14802 87 aa24.18■■□□□ 1.46
CCM2-219ENST00000544363 ZNF562Q6V9R5 426 aa24.18■■□□□ 1.46
CCM2-219ENST00000544363 C9orf139Q6ZV77 190 aa24.18■■□□□ 1.46
CCM2-219ENST00000544363 RBM14Q96PK6 669 aaKnown RBP24.18■■□□□ 1.46
CCM2-219ENST00000544363 GINS3Q9BRX5 216 aa24.18■■□□□ 1.46
CCM2-219ENST00000544363 CSPG4Q6UVK1 2322 aa24.18■■□□□ 1.46
CCM2-219ENST00000544363 RASL11BQ9BPW5 248 aa24.17■■□□□ 1.46
CCM2-219ENST00000544363 SRSF8Q9BRL6 282 aaKnown RBP24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms