RNA–Protein interactions for RNA: ENST00000544085.5

AFF1-211, Transcript of AF4/FMR2 family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF1, Length 3,644 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF1-211ENST00000544085 HOXA4Q00056 320 aaPredicted RBP6.74□□□□□ -1.33
AFF1-211ENST00000544085 KIR2DL5AQ8N109 375 aa6.74□□□□□ -1.33
AFF1-211ENST00000544085 GBGT1Q8N5D6 347 aa6.74□□□□□ -1.33
AFF1-211ENST00000544085 TPRX1Q8N7U7 411 aa6.74□□□□□ -1.33
AFF1-211ENST00000544085 SLC25A31Q9H0C2 315 aa6.74□□□□□ -1.33
AFF1-211ENST00000544085 UBTD1Q9HAC8 227 aa6.74□□□□□ -1.33
AFF1-211ENST00000544085 IDI2-AS1Q9NZ38 188 aa6.74□□□□□ -1.33
AFF1-211ENST00000544085 FAM96BQ9Y3D0 163 aa6.74□□□□□ -1.33
AFF1-211ENST00000544085 COX11Q9Y6N1 276 aa6.74□□□□□ -1.33
AFF1-211ENST00000544085 TGIF2-C20orf24A0A0A6YYL0 155 aa6.74□□□□□ -1.33
AFF1-211ENST00000544085 TNFRSF13BO14836 293 aaPredicted RBP6.74□□□□□ -1.33
AFF1-211ENST00000544085 SERPINE2P07093 398 aa6.74□□□□□ -1.33
AFF1-211ENST00000544085 EDN2P20800 178 aa6.74□□□□□ -1.33
AFF1-211ENST00000544085 F2RP25116 425 aa6.74□□□□□ -1.33
AFF1-211ENST00000544085 UNQ5815/PRO19632Q6UWF5 114 aa6.74□□□□□ -1.33
AFF1-211ENST00000544085 ZNF66Q6ZN08 573 aa6.74□□□□□ -1.33
AFF1-211ENST00000544085 TCF24Q7RTU0 167 aa6.74□□□□□ -1.33
AFF1-211ENST00000544085 RNF152Q8N8N0 203 aa6.74□□□□□ -1.33
AFF1-211ENST00000544085 DUX5Q96PT3 197 aa6.74□□□□□ -1.33
AFF1-211ENST00000544085 LINC00574Q9H8X3 128 aa6.74□□□□□ -1.33
AFF1-211ENST00000544085 DIDO1Q9BTC0 2240 aaKnown RBP6.74□□□□□ -1.33
AFF1-211ENST00000544085 LOC400499M0QZD8 3231 aa6.74□□□□□ -1.33
AFF1-211ENST00000544085 FXYD6-FXYD2A0A087WZ82 144 aa6.74□□□□□ -1.33
AFF1-211ENST00000544085 CGB3P0DN86 165 aa6.74□□□□□ -1.33
AFF1-211ENST00000544085 CGB7P0DN87 165 aa6.74□□□□□ -1.33
AFF1-211ENST00000544085 SSTR5P35346 364 aa6.74□□□□□ -1.33
AFF1-211ENST00000544085 BAXQ07812 192 aa6.74□□□□□ -1.33
AFF1-211ENST00000544085 VAMP3Q15836 100 aa6.74□□□□□ -1.33
AFF1-211ENST00000544085 UBALD1Q8TB05 177 aa6.74□□□□□ -1.33
AFF1-211ENST00000544085 C18orf12Q96KH6 178 aa6.74□□□□□ -1.33
AFF1-211ENST00000544085 TANC2Q9HCD6 1990 aa6.73□□□□□ -1.33
AFF1-211ENST00000544085 ANKHD1Q8IWZ3 2542 aaKnown RBP6.73□□□□□ -1.33
AFF1-211ENST00000544085 RAB29O14966 203 aa6.73□□□□□ -1.33
AFF1-211ENST00000544085 OR13C7P0DN81 318 aa6.73□□□□□ -1.33
AFF1-211ENST00000544085 PPP1CCP36873 323 aaKnown RBP6.73□□□□□ -1.33
AFF1-211ENST00000544085 MMDQ15546 238 aa6.73□□□□□ -1.33
AFF1-211ENST00000544085 TNXAQ16473 311 aa6.73□□□□□ -1.33
AFF1-211ENST00000544085 IAH1Q2TAA2 248 aaPredicted RBP6.73□□□□□ -1.33
AFF1-211ENST00000544085 TMEM155Q4W5P6 130 aa6.73□□□□□ -1.33
AFF1-211ENST00000544085 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.73□□□□□ -1.33
AFF1-211ENST00000544085 RFESDQ8TAC1 157 aa6.73□□□□□ -1.33
AFF1-211ENST00000544085 MSI2Q96DH6 328 aaKnown RBP6.73□□□□□ -1.33
AFF1-211ENST00000544085 SEC22AQ96IW7 307 aa6.73□□□□□ -1.33
AFF1-211ENST00000544085 C19orf84I3L1E1 186 aa6.73□□□□□ -1.33
AFF1-211ENST00000544085 CDS2O95674 445 aa6.73□□□□□ -1.33
AFF1-211ENST00000544085 RPL31P62899 125 aaKnown RBP6.73□□□□□ -1.33
AFF1-211ENST00000544085 RAB32Q13637 225 aa6.73□□□□□ -1.33
AFF1-211ENST00000544085 C11orf87Q6NUJ2 197 aa6.73□□□□□ -1.33
AFF1-211ENST00000544085 TGIF2LYQ8IUE0 185 aa6.73□□□□□ -1.33
AFF1-211ENST00000544085 PPP1R1CQ8WVI7 109 aa6.73□□□□□ -1.33
AFF1-211ENST00000544085 NRGNQ92686 78 aa6.73□□□□□ -1.33
AFF1-211ENST00000544085 P2RX4Q99571 388 aa6.73□□□□□ -1.33
AFF1-211ENST00000544085 HSD17B10Q99714 261 aaKnown RBP6.73□□□□□ -1.33
AFF1-211ENST00000544085 DCTN5Q9BTE1 182 aa6.73□□□□□ -1.33
AFF1-211ENST00000544085 OR2D2Q9H210 308 aa6.73□□□□□ -1.33
AFF1-211ENST00000544085 C7orf77A4D0Y5 90 aa6.72□□□□□ -1.33
AFF1-211ENST00000544085 G3V4G9 280 aa6.72□□□□□ -1.33
AFF1-211ENST00000544085 COL8A2P25067 703 aa6.72□□□□□ -1.33
AFF1-211ENST00000544085 ELLP55199 621 aaPredicted RBP6.72□□□□□ -1.33
AFF1-211ENST00000544085 SP6Q3SY56 376 aa6.72□□□□□ -1.33
AFF1-211ENST00000544085 MORN2Q502X0 79 aa6.72□□□□□ -1.33
AFF1-211ENST00000544085 DRAM1Q8N682 238 aa6.72□□□□□ -1.33
AFF1-211ENST00000544085 OR8B3Q8NGG8 313 aa6.72□□□□□ -1.33
AFF1-211ENST00000544085 H1FXQ92522 213 aaKnown RBP6.72□□□□□ -1.33
AFF1-211ENST00000544085 GPR146Q96CH1 333 aa6.72□□□□□ -1.33
AFF1-211ENST00000544085 OR8B2Q96RD0 313 aa6.72□□□□□ -1.33
AFF1-211ENST00000544085 GCGP01275 180 aa6.72□□□□□ -1.33
AFF1-211ENST00000544085 KIR2DS2P43631 304 aa6.72□□□□□ -1.33
AFF1-211ENST00000544085 C17orf58Q2M2W7 97 aa6.72□□□□□ -1.33
AFF1-211ENST00000544085 PRR31Q5SQ13 230 aa6.72□□□□□ -1.33
AFF1-211ENST00000544085 C19orf35Q6ZS72 473 aa6.72□□□□□ -1.33
AFF1-211ENST00000544085 LYPD6BQ8NI32 183 aa6.72□□□□□ -1.33
AFF1-211ENST00000544085 RNASEH2CQ8TDP1 164 aaKnown RBP6.72□□□□□ -1.33
AFF1-211ENST00000544085 NEIL1Q96FI4 390 aaPredicted RBP6.72□□□□□ -1.33
AFF1-211ENST00000544085 ABHD14BQ96IU4 210 aa6.72□□□□□ -1.33
AFF1-211ENST00000544085 ZNF714Q96N38 554 aa6.72□□□□□ -1.33
AFF1-211ENST00000544085 BBC3Q96PG8 261 aaPredicted RBP6.72□□□□□ -1.33
AFF1-211ENST00000544085 ABHD14AQ9BUJ0 271 aa6.72□□□□□ -1.33
AFF1-211ENST00000544085 PPDPFQ9H3Y8 114 aa6.72□□□□□ -1.33
AFF1-211ENST00000544085 LAMP3Q9UQV4 416 aa6.72□□□□□ -1.33
AFF1-211ENST00000544085 POLR3KQ9Y2Y1 108 aaPredicted RBP6.72□□□□□ -1.33
AFF1-211ENST00000544085 IGHV3-43A0A0B4J1X8 118 aa6.72□□□□□ -1.33
AFF1-211ENST00000544085 IGHV3-43DP0DP04 118 aa6.72□□□□□ -1.33
AFF1-211ENST00000544085 AREGP15514 252 aa6.72□□□□□ -1.33
AFF1-211ENST00000544085 VDAC1P21796 283 aa6.72□□□□□ -1.33
AFF1-211ENST00000544085 PLP1P60201 277 aa6.72□□□□□ -1.33
AFF1-211ENST00000544085 SRSF1Q07955 248 aaKnown RBP eCLIP6.72□□□□□ -1.33
AFF1-211ENST00000544085 OR2F1Q13607 317 aa6.72□□□□□ -1.33
AFF1-211ENST00000544085 INO80EQ8NBZ0 244 aaPredicted RBP6.72□□□□□ -1.33
AFF1-211ENST00000544085 C20orf24Q9BUV8 137 aa6.72□□□□□ -1.33
AFF1-211ENST00000544085 PRR13Q9NZ81 148 aa6.72□□□□□ -1.33
AFF1-211ENST00000544085 VPREB3Q9UKI3 123 aa6.72□□□□□ -1.33
AFF1-211ENST00000544085 RALYQ9UKM9 306 aaKnown RBP6.72□□□□□ -1.33
AFF1-211ENST00000544085 ARID1AO14497 2285 aa6.72□□□□□ -1.33
AFF1-211ENST00000544085 RBFOX2O43251 390 aaKnown RBP eCLIP6.71□□□□□ -1.33
AFF1-211ENST00000544085 PRB1P04280 392 aa6.71□□□□□ -1.33
AFF1-211ENST00000544085 EFNA4P52798 201 aa6.71□□□□□ -1.33
AFF1-211ENST00000544085 LTC4SQ16873 150 aa6.71□□□□□ -1.33
AFF1-211ENST00000544085 GCSAMLQ5JQS6 135 aa6.71□□□□□ -1.33
AFF1-211ENST00000544085 PRSS54Q6PEW0 395 aa6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms