RNA–Protein interactions for RNA: ENST00000543768.1

SCNN1A-221, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCNN1A, Length 2,361 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-221ENST00000543768 OR4F4Q96R69 305 aa13.16□□□□□ -0.3
SCNN1A-221ENST00000543768 GGTLC1Q9BX51 225 aa13.16□□□□□ -0.3
SCNN1A-221ENST00000543768 PARLQ9H300 379 aa13.16□□□□□ -0.3
SCNN1A-221ENST00000543768 SAP30LQ9HAJ7 183 aa13.16□□□□□ -0.3
SCNN1A-221ENST00000543768 LSM4Q9Y4Z0 139 aaKnown RBP13.16□□□□□ -0.3
SCNN1A-221ENST00000543768 ADGRG4Q8IZF6 3080 aa13.16□□□□□ -0.3
SCNN1A-221ENST00000543768 SRRM4A7MD48 611 aaKnown RBP13.16□□□□□ -0.3
SCNN1A-221ENST00000543768 TMEM178BH3BS89 294 aa13.16□□□□□ -0.3
SCNN1A-221ENST00000543768 K7ENP7 123 aa13.16□□□□□ -0.3
SCNN1A-221ENST00000543768 IGKV1-16P04430 117 aa13.16□□□□□ -0.3
SCNN1A-221ENST00000543768 HIST1H2BLQ99880 126 aa13.16□□□□□ -0.3
SCNN1A-221ENST00000543768 SCNM1Q9BWG6 230 aa13.16□□□□□ -0.3
SCNN1A-221ENST00000543768 PATZ1Q9HBE1 687 aaKnown RBP13.16□□□□□ -0.3
SCNN1A-221ENST00000543768 A8MWP6 167 aa13.15□□□□□ -0.3
SCNN1A-221ENST00000543768 RPL31P62899 125 aaKnown RBP13.15□□□□□ -0.3
SCNN1A-221ENST00000543768 MEF2CQ06413 473 aaPredicted RBP13.15□□□□□ -0.3
SCNN1A-221ENST00000543768 USF2Q15853 346 aaPredicted RBP13.15□□□□□ -0.3
SCNN1A-221ENST00000543768 ARSJQ5FYB0 599 aaPredicted RBP13.15□□□□□ -0.3
SCNN1A-221ENST00000543768 MIC13Q5XKP0 118 aa13.15□□□□□ -0.3
SCNN1A-221ENST00000543768 SSX8Q7RTT4 187 aa13.15□□□□□ -0.3
SCNN1A-221ENST00000543768 SLC24A4Q8NFF2 622 aa13.15□□□□□ -0.3
SCNN1A-221ENST00000543768 FAM210BQ96KR6 192 aa13.15□□□□□ -0.3
SCNN1A-221ENST00000543768 NOL4LQ96MY1 436 aaPredicted RBP13.15□□□□□ -0.3
SCNN1A-221ENST00000543768 NPVFQ9HCQ7 196 aa13.15□□□□□ -0.3
SCNN1A-221ENST00000543768 TNCP24821 2201 aa13.15□□□□□ -0.3
SCNN1A-221ENST00000543768 PPIAL4EA0A075B759 164 aa13.15□□□□□ -0.3
SCNN1A-221ENST00000543768 PPIAL4DF5H284 164 aa13.15□□□□□ -0.3
SCNN1A-221ENST00000543768 TNFRSF13BO14836 293 aaPredicted RBP13.15□□□□□ -0.3
SCNN1A-221ENST00000543768 PPIAL4FP0DN26 164 aa13.15□□□□□ -0.3
SCNN1A-221ENST00000543768 NPY1RP25929 384 aa13.15□□□□□ -0.3
SCNN1A-221ENST00000543768 NUTF2P61970 127 aaKnown RBP13.15□□□□□ -0.3
SCNN1A-221ENST00000543768 RPL23P62829 140 aaKnown RBP13.15□□□□□ -0.3
SCNN1A-221ENST00000543768 JOSD1Q15040 202 aaPredicted RBP13.15□□□□□ -0.3
SCNN1A-221ENST00000543768 ADIRFQ15847 76 aa13.15□□□□□ -0.3
SCNN1A-221ENST00000543768 OR10A7Q8NGE5 316 aa13.15□□□□□ -0.3
SCNN1A-221ENST00000543768 NDUFAF3Q9BU61 184 aa13.15□□□□□ -0.3
SCNN1A-221ENST00000543768 CTDSP1Q9GZU7 261 aa13.15□□□□□ -0.3
SCNN1A-221ENST00000543768 SLC35D1Q9NTN3 355 aa13.15□□□□□ -0.3
SCNN1A-221ENST00000543768 PPIAL4AQ9Y536 164 aa13.15□□□□□ -0.3
SCNN1A-221ENST00000543768 OR51B2Q9Y5P1 312 aa13.15□□□□□ -0.3
SCNN1A-221ENST00000543768 PXMP4Q9Y6I8 212 aa13.15□□□□□ -0.3
SCNN1A-221ENST00000543768 DVL1O14640 695 aa13.14□□□□□ -0.31
SCNN1A-221ENST00000543768 CCL3L1P16619 93 aa13.14□□□□□ -0.31
SCNN1A-221ENST00000543768 ZNF833PQ6ZTB9 187 aa13.14□□□□□ -0.31
SCNN1A-221ENST00000543768 C1orf87Q8N0U7 546 aa13.14□□□□□ -0.31
SCNN1A-221ENST00000543768 GAL3ST2Q9H3Q3 398 aa13.14□□□□□ -0.31
SCNN1A-221ENST00000543768 A0A1W2PPV4 95 aa13.14□□□□□ -0.31
SCNN1A-221ENST00000543768 UPK2O00526 184 aa13.14□□□□□ -0.31
SCNN1A-221ENST00000543768 PHOX2AO14813 284 aa13.14□□□□□ -0.31
SCNN1A-221ENST00000543768 CA2P00918 260 aa13.14□□□□□ -0.31
SCNN1A-221ENST00000543768 NPPCP23582 126 aa13.14□□□□□ -0.31
SCNN1A-221ENST00000543768 TMEM200BQ69YZ2 307 aa13.14□□□□□ -0.31
SCNN1A-221ENST00000543768 BEND2Q8NDZ0 799 aa13.14□□□□□ -0.31
SCNN1A-221ENST00000543768 CCL17Q92583 94 aa13.14□□□□□ -0.31
SCNN1A-221ENST00000543768 NEIL1Q96FI4 390 aaPredicted RBP13.14□□□□□ -0.31
SCNN1A-221ENST00000543768 PPP1R14DQ9NXH3 145 aa13.14□□□□□ -0.31
SCNN1A-221ENST00000543768 PRNDQ9UKY0 176 aa13.14□□□□□ -0.31
SCNN1A-221ENST00000543768 SHISA9B4DS77 424 aa13.13□□□□□ -0.31
SCNN1A-221ENST00000543768 C11orf94C9JXX5 98 aa13.13□□□□□ -0.31
SCNN1A-221ENST00000543768 RTL8BQ17RB0 113 aa13.13□□□□□ -0.31
SCNN1A-221ENST00000543768 BSXQ3C1V8 233 aa13.13□□□□□ -0.31
SCNN1A-221ENST00000543768 LYPD2Q6UXB3 125 aa13.13□□□□□ -0.31
SCNN1A-221ENST00000543768 RND1Q92730 232 aa13.13□□□□□ -0.31
SCNN1A-221ENST00000543768 RNASE6Q93091 150 aaKnown RBP13.13□□□□□ -0.31
SCNN1A-221ENST00000543768 ZNF714Q96N38 554 aa13.13□□□□□ -0.31
SCNN1A-221ENST00000543768 ENY2Q9NPA8 101 aa13.13□□□□□ -0.31
SCNN1A-221ENST00000543768 PITPNC1Q9UKF7 332 aa13.13□□□□□ -0.31
SCNN1A-221ENST00000543768 ZNF257Q9Y2Q1 563 aa13.13□□□□□ -0.31
SCNN1A-221ENST00000543768 OPN1MWP04001 364 aa13.13□□□□□ -0.31
SCNN1A-221ENST00000543768 SNRPCP09234 159 aaKnown RBP13.13□□□□□ -0.31
SCNN1A-221ENST00000543768 OPN1MW2P0DN77 364 aa13.13□□□□□ -0.31
SCNN1A-221ENST00000543768 OPN1MW3P0DN78 364 aa13.13□□□□□ -0.31
SCNN1A-221ENST00000543768 RELQ04864 619 aaPredicted RBP13.13□□□□□ -0.31
SCNN1A-221ENST00000543768 TMEM106BQ9NUM4 274 aa13.13□□□□□ -0.31
SCNN1A-221ENST00000543768 TRBV24-1A0A075B6N3 115 aa13.12□□□□□ -0.31
SCNN1A-221ENST00000543768 E7EQL1 145 aa13.12□□□□□ -0.31
SCNN1A-221ENST00000543768 J3QR06 171 aa13.12□□□□□ -0.31
SCNN1A-221ENST00000543768 CASP6P55212 293 aa13.12□□□□□ -0.31
SCNN1A-221ENST00000543768 C16orf82Q7Z2V1 217 aa13.12□□□□□ -0.31
SCNN1A-221ENST00000543768 RNASEH2CQ8TDP1 164 aaKnown RBP13.12□□□□□ -0.31
SCNN1A-221ENST00000543768 NEUROG1Q92886 237 aa13.12□□□□□ -0.31
SCNN1A-221ENST00000543768 HINT2Q9BX68 163 aa13.12□□□□□ -0.31
SCNN1A-221ENST00000543768 KALRNO60229 2985 aa13.12□□□□□ -0.31
SCNN1A-221ENST00000543768 STAG3L2P0CL84 134 aa13.12□□□□□ -0.31
SCNN1A-221ENST00000543768 STAG3L3P0CL85 134 aa13.12□□□□□ -0.31
SCNN1A-221ENST00000543768 GZMBP10144 247 aa13.12□□□□□ -0.31
SCNN1A-221ENST00000543768 PRCDQ00LT1 54 aa13.12□□□□□ -0.31
SCNN1A-221ENST00000543768 C4orf17Q53FE4 359 aa13.12□□□□□ -0.31
SCNN1A-221ENST00000543768 TEPPQ6URK8 271 aa13.12□□□□□ -0.31
SCNN1A-221ENST00000543768 ZNF664Q8N3J9 261 aa13.12□□□□□ -0.31
SCNN1A-221ENST00000543768 SSMEM1Q8WWF3 244 aa13.12□□□□□ -0.31
SCNN1A-221ENST00000543768 MRPL20Q9BYC9 149 aaKnown RBP13.12□□□□□ -0.31
SCNN1A-221ENST00000543768 PKDREJQ9NTG1 2253 aa13.11□□□□□ -0.31
SCNN1A-221ENST00000543768 ARFGEF3Q5TH69 2177 aa13.11□□□□□ -0.31
SCNN1A-221ENST00000543768 TEX50A0A1B0GTY4 177 aa13.11□□□□□ -0.31
SCNN1A-221ENST00000543768 ATP5G3P48201 142 aa13.11□□□□□ -0.31
SCNN1A-221ENST00000543768 UBE2G2P60604 165 aa13.11□□□□□ -0.31
SCNN1A-221ENST00000543768 BET1LQ9NYM9 111 aa13.11□□□□□ -0.31
SCNN1A-221ENST00000543768 VSTM5A8MXK1 200 aa13.1□□□□□ -0.31
SCNN1A-221ENST00000543768 PFN1P07737 140 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms