RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, human

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIT-213	ENST00000543324	OR5H8	P0DN80	308 aa		5.15	□□□□□ -1.59
CIT-213	ENST00000543324	GLRA1	P23415	457 aa		5.15	□□□□□ -1.59
CIT-213	ENST00000543324	PPP1CC	P36873	323 aa	Known RBP	5.15	□□□□□ -1.59
CIT-213	ENST00000543324	ERVFRD-1	P60508	538 aa		5.15	□□□□□ -1.59
CIT-213	ENST00000543324	PRB3	Q04118	309 aa	Predicted RBP	5.15	□□□□□ -1.59
CIT-213	ENST00000543324	TNFRSF9	Q07011	255 aa		5.15	□□□□□ -1.59
CIT-213	ENST00000543324	ZNF616	Q08AN1	781 aa		5.15	□□□□□ -1.59
CIT-213	ENST00000543324	IL24	Q13007	206 aa		5.15	□□□□□ -1.59
CIT-213	ENST00000543324	HAGH	Q16775	308 aa		5.15	□□□□□ -1.59
CIT-213	ENST00000543324	ODF4	Q2M2E3	257 aa		5.15	□□□□□ -1.59
CIT-213	ENST00000543324	SMIM21	Q3B7S5	101 aa		5.15	□□□□□ -1.59
CIT-213	ENST00000543324	LDLRAD2	Q5SZI1	272 aa		5.15	□□□□□ -1.59
CIT-213	ENST00000543324	AKR1C8P	Q5T2L2	129 aa		5.15	□□□□□ -1.59
CIT-213	ENST00000543324	GGNBP1	Q5YKI7	109 aa		5.15	□□□□□ -1.59
CIT-213	ENST00000543324	PLCXD3	Q63HM9	321 aa		5.15	□□□□□ -1.59
CIT-213	ENST00000543324	ZNF573	Q86YE8	665 aa		5.15	□□□□□ -1.59
CIT-213	ENST00000543324	CALHM1	Q8IU99	346 aa		5.15	□□□□□ -1.59
CIT-213	ENST00000543324	SGPP2	Q8IWX5	399 aa		5.15	□□□□□ -1.59
CIT-213	ENST00000543324	PNKD	Q8N490	385 aa		5.15	□□□□□ -1.59
CIT-213	ENST00000543324	OR52N4	Q8NGI2	321 aa		5.15	□□□□□ -1.59
CIT-213	ENST00000543324	PIFO	Q8TCI5	191 aa		5.15	□□□□□ -1.59
CIT-213	ENST00000543324	WIPF2	Q8TF74	440 aa	Predicted RBP	5.15	□□□□□ -1.59
CIT-213	ENST00000543324	FRZB	Q92765	325 aa		5.15	□□□□□ -1.59
CIT-213	ENST00000543324	PACRG	Q96M98	296 aa	Predicted RBP	5.15	□□□□□ -1.59
CIT-213	ENST00000543324	HIST1H2BL	Q99880	126 aa		5.15	□□□□□ -1.59
CIT-213	ENST00000543324	ASCL2	Q99929	193 aa		5.15	□□□□□ -1.59
CIT-213	ENST00000543324	PYGO2	Q9BRQ0	406 aa		5.15	□□□□□ -1.59
CIT-213	ENST00000543324	URM1	Q9BTM9	101 aa	Known RBP	5.15	□□□□□ -1.59
CIT-213	ENST00000543324	TM2D1	Q9BX74	207 aa		5.15	□□□□□ -1.59
CIT-213	ENST00000543324	PKIB	Q9C010	78 aa		5.15	□□□□□ -1.59
CIT-213	ENST00000543324	MEGF9	Q9H1U4	602 aa		5.15	□□□□□ -1.59
CIT-213	ENST00000543324	C11orf1	Q9H5F2	150 aa		5.15	□□□□□ -1.59
CIT-213	ENST00000543324	WFDC1	Q9HC57	220 aa		5.15	□□□□□ -1.59
CIT-213	ENST00000543324	FBXO7	Q9Y3I1	522 aa		5.15	□□□□□ -1.59
CIT-213	ENST00000543324	MYCBP2	O75592	4640 aa		5.14	□□□□□ -1.59
CIT-213	ENST00000543324	SERPINE3	A8MV23	424 aa		5.14	□□□□□ -1.59
CIT-213	ENST00000543324	ANGPTL7	O43827	346 aa		5.14	□□□□□ -1.59
CIT-213	ENST00000543324	PITX3	O75364	302 aa		5.14	□□□□□ -1.59
CIT-213	ENST00000543324	PRH1	P02810	166 aa		5.14	□□□□□ -1.59
CIT-213	ENST00000543324	TRGC2	P03986	189 aa		5.14	□□□□□ -1.59
CIT-213	ENST00000543324	TK1	P04183	234 aa		5.14	□□□□□ -1.59
CIT-213	ENST00000543324	OR13C7	P0DN81	318 aa		5.14	□□□□□ -1.59
CIT-213	ENST00000543324	GZMB	P10144	247 aa		5.14	□□□□□ -1.59
CIT-213	ENST00000543324	FABP4	P15090	132 aa		5.14	□□□□□ -1.59
CIT-213	ENST00000543324	ZNF93	P35789	620 aa	Predicted RBP	5.14	□□□□□ -1.59
CIT-213	ENST00000543324	CEBPD	P49716	269 aa	Predicted RBP	5.14	□□□□□ -1.59
CIT-213	ENST00000543324	TMEM50B	P56557	158 aa		5.14	□□□□□ -1.59
CIT-213	ENST00000543324	HLA-DRB3	P79483	266 aa		5.14	□□□□□ -1.59
CIT-213	ENST00000543324	PMS2P11	Q13670	270 aa		5.14	□□□□□ -1.59
CIT-213	ENST00000543324	ZNF266	Q14584	549 aa		5.14	□□□□□ -1.59
CIT-213	ENST00000543324	TMEM187	Q14656	261 aa		5.14	□□□□□ -1.59
CIT-213	ENST00000543324	ICAM4	Q14773	271 aa		5.14	□□□□□ -1.59
CIT-213	ENST00000543324	HERPUD1	Q15011	391 aa		5.14	□□□□□ -1.59
CIT-213	ENST00000543324	PLAC9	Q5JTB6	97 aa		5.14	□□□□□ -1.59
CIT-213	ENST00000543324	TMEM200B	Q69YZ2	307 aa		5.14	□□□□□ -1.59
CIT-213	ENST00000543324	ZNF429	Q86V71	674 aa		5.14	□□□□□ -1.59
CIT-213	ENST00000543324	MKX	Q8IYA7	352 aa		5.14	□□□□□ -1.59
CIT-213	ENST00000543324		Q8N2B8	174 aa		5.14	□□□□□ -1.59
CIT-213	ENST00000543324	ZNF664	Q8N3J9	261 aa		5.14	□□□□□ -1.59
CIT-213	ENST00000543324	OR5D14	Q8NGL3	314 aa		5.14	□□□□□ -1.59
CIT-213	ENST00000543324	OR5D13	Q8NGL4	314 aa		5.14	□□□□□ -1.59
CIT-213	ENST00000543324	OR13C9	Q8NGT0	318 aa		5.14	□□□□□ -1.59
CIT-213	ENST00000543324	PPP1R35	Q8TAP8	253 aa		5.14	□□□□□ -1.59
CIT-213	ENST00000543324	ABHD5	Q8WTS1	349 aa		5.14	□□□□□ -1.59
CIT-213	ENST00000543324	LINC00476	Q8WZB0	136 aa		5.14	□□□□□ -1.59
CIT-213	ENST00000543324	CFHR4	Q92496	578 aa		5.14	□□□□□ -1.59
CIT-213	ENST00000543324	H1FX	Q92522	213 aa	Known RBP	5.14	□□□□□ -1.59
CIT-213	ENST00000543324	C10orf35	Q96D05	121 aa		5.14	□□□□□ -1.59
CIT-213	ENST00000543324	ACY3	Q96HD9	319 aa		5.14	□□□□□ -1.59
CIT-213	ENST00000543324	FAM210B	Q96KR6	192 aa		5.14	□□□□□ -1.59
CIT-213	ENST00000543324	ZNF488	Q96MN9	340 aa		5.14	□□□□□ -1.59
CIT-213	ENST00000543324	P2RX4	Q99571	388 aa		5.14	□□□□□ -1.59
CIT-213	ENST00000543324	NIPSNAP3B	Q9BS92	247 aa		5.14	□□□□□ -1.59
CIT-213	ENST00000543324	TMEM59	Q9BXS4	323 aa		5.14	□□□□□ -1.59
CIT-213	ENST00000543324	FAM234A	Q9H0X4	552 aa		5.14	□□□□□ -1.59
CIT-213	ENST00000543324	PRO1933	Q9H354	126 aa		5.14	□□□□□ -1.59
CIT-213	ENST00000543324	SRD5A3	Q9H8P0	318 aa		5.14	□□□□□ -1.59
CIT-213	ENST00000543324	GPR173	Q9NS66	373 aa		5.14	□□□□□ -1.59
CIT-213	ENST00000543324	MTCH1	Q9NZJ7	389 aa		5.14	□□□□□ -1.59
CIT-213	ENST00000543324	VAX2	Q9UIW0	290 aa		5.14	□□□□□ -1.59
CIT-213	ENST00000543324	HSF4	Q9ULV5	492 aa		5.14	□□□□□ -1.59
CIT-213	ENST00000543324	MRPS28	Q9Y2Q9	187 aa	Known RBP	5.14	□□□□□ -1.59
CIT-213	ENST00000543324	POLDIP2	Q9Y2S7	368 aa		5.14	□□□□□ -1.59
CIT-213	ENST00000543324	PUS1	Q9Y606	427 aa	Known RBP eCLIP	5.14	□□□□□ -1.59
CIT-213	ENST00000543324	TGIF2-C20orf24	A0A0A6YYL0	155 aa		5.13	□□□□□ -1.59
CIT-213	ENST00000543324	IGKV1-9	A0A0C4DH69	117 aa		5.13	□□□□□ -1.59
CIT-213	ENST00000543324	KIR2DL5B	A0A0G2JN68	375 aa		5.13	□□□□□ -1.59
CIT-213	ENST00000543324	KIR2DL5B	A0A0G2JPC4	375 aa		5.13	□□□□□ -1.59
CIT-213	ENST00000543324		A0A1B0GU03	582 aa		5.13	□□□□□ -1.59
CIT-213	ENST00000543324	LOC102723971	A0A1B0GUV8	181 aa		5.13	□□□□□ -1.59
CIT-213	ENST00000543324	FAM230A	A0A1W2PPH8	454 aa		5.13	□□□□□ -1.59
CIT-213	ENST00000543324	TRDC	B7Z8K6	153 aa		5.13	□□□□□ -1.59
CIT-213	ENST00000543324	PPP5D1	E7EU14	171 aa		5.13	□□□□□ -1.59
CIT-213	ENST00000543324		H3BSH0	61 aa		5.13	□□□□□ -1.59
CIT-213	ENST00000543324		M0R143	59 aa		5.13	□□□□□ -1.59
CIT-213	ENST00000543324	EREG	O14944	169 aa		5.13	□□□□□ -1.59
CIT-213	ENST00000543324	SOCS1	O15524	211 aa		5.13	□□□□□ -1.59
CIT-213	ENST00000543324	CYB5B	O43169	146 aa		5.13	□□□□□ -1.59
CIT-213	ENST00000543324	DLEU1	O43261	78 aa		5.13	□□□□□ -1.59
CIT-213	ENST00000543324	HSPA12A	O43301	675 aa		5.13	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms