RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 OPN1MW2P0DN77 364 aa9.56□□□□□ -0.88
DDX55-210ENST00000543016 OPN1MW3P0DN78 364 aa9.56□□□□□ -0.88
DDX55-210ENST00000543016 CHRNA7P36544 502 aa9.56□□□□□ -0.88
DDX55-210ENST00000543016 SMCO1Q147U7 214 aa9.56□□□□□ -0.88
DDX55-210ENST00000543016 ECSCRQ19T08 205 aa9.56□□□□□ -0.88
DDX55-210ENST00000543016 PDLIM3Q53GG5 364 aaPredicted RBP9.56□□□□□ -0.88
DDX55-210ENST00000543016 LYZL2Q7Z4W2 148 aa9.56□□□□□ -0.88
DDX55-210ENST00000543016 TTC9CQ8N5M4 171 aa9.56□□□□□ -0.88
DDX55-210ENST00000543016 GPR146Q96CH1 333 aa9.56□□□□□ -0.88
DDX55-210ENST00000543016 FYTTD1Q96QD9 318 aaKnown RBP9.56□□□□□ -0.88
DDX55-210ENST00000543016 SLA2Q9H6Q3 261 aa9.56□□□□□ -0.88
DDX55-210ENST00000543016 ZFP57Q9NU63 452 aa9.56□□□□□ -0.88
DDX55-210ENST00000543016 CACNG5Q9UF02 275 aa9.56□□□□□ -0.88
DDX55-210ENST00000543016 FBXO7Q9Y3I1 522 aa9.56□□□□□ -0.88
DDX55-210ENST00000543016 WSB1Q9Y6I7 421 aa9.56□□□□□ -0.88
DDX55-210ENST00000543016 TEX22C9J3V5 150 aa9.55□□□□□ -0.88
DDX55-210ENST00000543016 FAM90A26D6RGX4 464 aa9.55□□□□□ -0.88
DDX55-210ENST00000543016 G3V318 75 aa9.55□□□□□ -0.88
DDX55-210ENST00000543016 FBXO24O75426 580 aa9.55□□□□□ -0.88
DDX55-210ENST00000543016 LY86O95711 162 aa9.55□□□□□ -0.88
DDX55-210ENST00000543016 CRYGCP07315 174 aa9.55□□□□□ -0.88
DDX55-210ENST00000543016 SPCS3P61009 180 aa9.55□□□□□ -0.88
DDX55-210ENST00000543016 PRCDQ00LT1 54 aa9.55□□□□□ -0.88
DDX55-210ENST00000543016 CXorf66Q5JRM2 361 aaPredicted RBP9.55□□□□□ -0.88
DDX55-210ENST00000543016 TMEM65Q6PI78 240 aa9.55□□□□□ -0.88
DDX55-210ENST00000543016 C12orf45Q8N5I9 185 aaPredicted RBP9.55□□□□□ -0.88
DDX55-210ENST00000543016 OR1L6Q8NGR2 347 aa9.55□□□□□ -0.88
DDX55-210ENST00000543016 FAM110DQ8TAY7 271 aaPredicted RBP9.55□□□□□ -0.88
DDX55-210ENST00000543016 CITED1Q99966 193 aa9.55□□□□□ -0.88
DDX55-210ENST00000543016 FAM103A1Q9BTL3 118 aaKnown RBP9.55□□□□□ -0.88
DDX55-210ENST00000543016 LINC00527Q9UJ94 153 aa9.55□□□□□ -0.88
DDX55-210ENST00000543016 NSG2Q9Y328 171 aa9.55□□□□□ -0.88
DDX55-210ENST00000543016 A0A0G2JRQ6 117 aa9.54□□□□□ -0.88
DDX55-210ENST00000543016 DBX1A6NMT0 343 aa9.54□□□□□ -0.88
DDX55-210ENST00000543016 ST8SIA3O43173 380 aa9.54□□□□□ -0.88
DDX55-210ENST00000543016 IFNA17P01571 189 aa9.54□□□□□ -0.88
DDX55-210ENST00000543016 HIST1H1BP16401 226 aaKnown RBP9.54□□□□□ -0.88
DDX55-210ENST00000543016 PSMB8P28062 276 aa9.54□□□□□ -0.88
DDX55-210ENST00000543016 PSMB6P28072 239 aa9.54□□□□□ -0.88
DDX55-210ENST00000543016 ERHP84090 104 aaKnown RBP9.54□□□□□ -0.88
DDX55-210ENST00000543016 CD83Q01151 205 aa9.54□□□□□ -0.88
DDX55-210ENST00000543016 KLK9Q2XQG4 91 aa9.54□□□□□ -0.88
DDX55-210ENST00000543016 C10orf55Q5SWW7 151 aa9.54□□□□□ -0.88
DDX55-210ENST00000543016 ASPHD1Q5U4P2 390 aa9.54□□□□□ -0.88
DDX55-210ENST00000543016 GGNBP1Q5YKI7 109 aa9.54□□□□□ -0.88
DDX55-210ENST00000543016 Q6ZRM9 215 aa9.54□□□□□ -0.88
DDX55-210ENST00000543016 ZNF329Q86UD4 541 aa9.54□□□□□ -0.88
DDX55-210ENST00000543016 PLEKHA3Q9HB20 300 aa9.54□□□□□ -0.88
DDX55-210ENST00000543016 ENY2Q9NPA8 101 aa9.54□□□□□ -0.88
DDX55-210ENST00000543016 PRR13Q9NZ81 148 aa9.54□□□□□ -0.88
DDX55-210ENST00000543016 KLK9Q9UKQ9 250 aa9.54□□□□□ -0.88
DDX55-210ENST00000543016 IGLC7A0M8Q6 106 aa9.53□□□□□ -0.88
DDX55-210ENST00000543016 CGB1A6NKQ9 187 aa9.53□□□□□ -0.88
DDX55-210ENST00000543016 E7EUB6 86 aa9.53□□□□□ -0.88
DDX55-210ENST00000543016 PITX3O75364 302 aa9.53□□□□□ -0.88
DDX55-210ENST00000543016 MED6O75586 246 aa9.53□□□□□ -0.88
DDX55-210ENST00000543016 HOXB5P09067 269 aa9.53□□□□□ -0.88
DDX55-210ENST00000543016 CTRB1P17538 263 aa9.53□□□□□ -0.88
DDX55-210ENST00000543016 ATP5IP56385 69 aaPredicted RBP9.53□□□□□ -0.88
DDX55-210ENST00000543016 OXA1LQ15070 435 aa9.53□□□□□ -0.88
DDX55-210ENST00000543016 FAM209BQ5JX69 171 aa9.53□□□□□ -0.88
DDX55-210ENST00000543016 CTRB2Q6GPI1 263 aa9.53□□□□□ -0.88
DDX55-210ENST00000543016 NDUFA11Q86Y39 141 aa9.53□□□□□ -0.88
DDX55-210ENST00000543016 OR52B4Q8NGK2 314 aa9.53□□□□□ -0.88
DDX55-210ENST00000543016 OR1S1Q8NH92 325 aa9.53□□□□□ -0.88
DDX55-210ENST00000543016 USMG5Q96IX5 58 aa9.53□□□□□ -0.88
DDX55-210ENST00000543016 SEC22CQ9BRL7 303 aa9.53□□□□□ -0.88
DDX55-210ENST00000543016 HINT2Q9BX68 163 aa9.53□□□□□ -0.88
DDX55-210ENST00000543016 THYN1Q9P016 225 aa9.53□□□□□ -0.88
DDX55-210ENST00000543016 TSSC4Q9Y5U2 329 aaPredicted RBP9.53□□□□□ -0.88
DDX55-210ENST00000543016 A0A0G2JLM5 398 aa9.52□□□□□ -0.89
DDX55-210ENST00000543016 A0A1B0GW64 132 aa9.52□□□□□ -0.89
DDX55-210ENST00000543016 TCRBV4S1A1TA0A5B7 111 aa9.52□□□□□ -0.89
DDX55-210ENST00000543016 C7orf66A4D0T2 115 aa9.52□□□□□ -0.89
DDX55-210ENST00000543016 HMX3A6NHT5 357 aa9.52□□□□□ -0.89
DDX55-210ENST00000543016 OR13C7P0DN81 318 aa9.52□□□□□ -0.89
DDX55-210ENST00000543016 PF4V1P10720 104 aa9.52□□□□□ -0.89
DDX55-210ENST00000543016 RAB9AP51151 201 aa9.52□□□□□ -0.89
DDX55-210ENST00000543016 SUB1P53999 127 aaKnown RBP eCLIP9.52□□□□□ -0.89
DDX55-210ENST00000543016 IZUMO4Q1ZYL8 232 aa9.52□□□□□ -0.89
DDX55-210ENST00000543016 NOXA1Q86UR1 476 aa9.52□□□□□ -0.89
DDX55-210ENST00000543016 OR5T1Q8NG75 326 aa9.52□□□□□ -0.89
DDX55-210ENST00000543016 MYOZ3Q8TDC0 251 aa9.52□□□□□ -0.89
DDX55-210ENST00000543016 UBE2E2Q96LR5 201 aa9.52□□□□□ -0.89
DDX55-210ENST00000543016 HSPB7Q9UBY9 170 aa9.52□□□□□ -0.89
DDX55-210ENST00000543016 FAM223BA6NKX1 122 aa9.51□□□□□ -0.89
DDX55-210ENST00000543016 SOX15O60248 233 aa9.51□□□□□ -0.89
DDX55-210ENST00000543016 CD28P10747 220 aa9.51□□□□□ -0.89
DDX55-210ENST00000543016 DEFA4P12838 97 aa9.51□□□□□ -0.89
DDX55-210ENST00000543016 MYOD1P15172 320 aa9.51□□□□□ -0.89
DDX55-210ENST00000543016 SPNP16150 400 aa9.51□□□□□ -0.89
DDX55-210ENST00000543016 SNCAP37840 140 aa9.51□□□□□ -0.89
DDX55-210ENST00000543016 CDX1P47902 265 aaPredicted RBP9.51□□□□□ -0.89
DDX55-210ENST00000543016 WT1-ASQ06250 92 aa9.51□□□□□ -0.89
DDX55-210ENST00000543016 TNFRSF9Q07011 255 aa9.51□□□□□ -0.89
DDX55-210ENST00000543016 TATDN3Q17R31 274 aa9.51□□□□□ -0.89
DDX55-210ENST00000543016 FAM223AQ8IWN6 122 aa9.51□□□□□ -0.89
DDX55-210ENST00000543016 OR2C3Q8N628 320 aa9.51□□□□□ -0.89
DDX55-210ENST00000543016 ZNF114Q8NC26 417 aa9.51□□□□□ -0.89
DDX55-210ENST00000543016 NECAP1Q8NC96 275 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms